CK939467

Overview
NameCK939467
Unique NameCK939467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 4.137e-86
Identity = 160/230 (69.57%), Postives = 191/230 (83.04%), Query Frame = 2
Query:  119 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            +RYDRAITVFSPDGHLFQVEYA EAV+KG+ AVG+RGT+ +VLGVEKKS  KLQD R+VRKI +LD+H+ +A AGL ADARV+INRAR+ECQSH+LTVEDPVTVEYITR+IA L+QKYTQS G RPFG+S LIVGFD   G+P LYQTDPSGT+ AWKANA GR++ ++REFLEKNY E    S  E IKLAI+ALLEVV+SGGKNIE+A++ R + LK     E++  V
Sbjct:    3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDD-DGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEVVQSGGKNIELAIIRRNQPLKMFSAKEVELYV 231          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.204e-85
Identity = 159/230 (69.13%), Postives = 194/230 (84.35%), Query Frame = 2
Query:  119 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            +RYDRAITVFSPDGHLFQVEYA EAV+KG+ AVG+RGT+ +VLGVEKKS  KLQD R+VRKI +LD+H+ +A AGL ADARV+I+RAR+ECQSH+LTVEDPVTVEYITR+IA L+QKYTQS G RPFG+S LIVGFD   G+P LYQTDPSGT+ AWKANA GR++ ++REFLEKNY E   ++ +E IKLAI+ALLEVV+SGGKNIE+A++ R++ LK     EI+  V
Sbjct:    3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDD-DGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEVVQSGGKNIELAIIRRDQPLKMFSAKEIELEV 231          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 2.053e-85
Identity = 161/228 (70.61%), Postives = 190/228 (83.33%), Query Frame = 2
Query:  125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS  KLQD R+VRKI +LD+++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEKNY + + +    TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+  EI+  V
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYV 229          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 3.502e-85
Identity = 161/228 (70.61%), Postives = 190/228 (83.33%), Query Frame = 2
Query:  125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS  KLQD R+VRKI +LD+++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEKNY + + +    TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+  EI+  V
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIEKYV 229          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 3.502e-85
Identity = 161/228 (70.61%), Postives = 190/228 (83.33%), Query Frame = 2
Query:  125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS  KLQD R+VRKI +LD+++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEKNY + + +    TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+  EI+  V
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIEKYV 229          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2)

HSP 1 Score: 311.612 bits (797), Expect = 3.872e-84
Identity = 159/228 (69.74%), Postives = 189/228 (82.89%), Query Frame = 2
Query:  125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            YDRAITVFSPDGHLFQVEYA EA++KG+ AVGVRG D +VLGVEKKS  KLQD R+VRKI +LD+++ +A AGL ADAR++INRAR+ECQSHRLTVED VTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEKNY + + +    TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+  EI+  V
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAIKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIEEYV 229          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 8.626e-84
Identity = 159/228 (69.74%), Postives = 189/228 (82.89%), Query Frame = 2
Query:  125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG + +VLGVEKKS  KLQD R+VRKI +LD ++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEK+Y + + +    TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+  EI+  V
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIERYV 229          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 8.626e-84
Identity = 159/228 (69.74%), Postives = 189/228 (82.89%), Query Frame = 2
Query:  125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG + +VLGVEKKS  KLQD R+VRKI +LD ++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEK+Y + + +    TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+  EI+  V
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIERYV 229          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3)

HSP 1 Score: 308.531 bits (789), Expect = 3.278e-83
Identity = 159/236 (67.37%), Postives = 190/236 (80.51%), Query Frame = 2
Query:  119 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACA------GLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            +RYDRAITVFSPDGHLFQVEYA EAV+KG+ AVG+RGT+ +VLGVEKKS  KLQD R+VRKI +LD+H+ +A A      GL ADARV+INRAR+ECQSH+LTVEDPVTVEYITR+IA L+QKYTQS G RPFG+S LIVGFD   G+  LYQTDPSGT+ AWKANA GR++ ++REFLEKNY E    S  E IKLAI+ALLEVV+SGGKNIE+A++ R + LK     E++  V
Sbjct:    3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAVLTIFIGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDD-DGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQSGGKNIELAIIRRNQPLKMFSAKEVELYV 237          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7_RAT (Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.775e-82
Identity = 160/234 (68.38%), Postives = 188/234 (80.34%), Query Frame = 2
Query:  125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACA------GLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS  KLQD R+VRKI +LD+++ +A A      GL ADAR++INRAR+ECQSHRLTV DPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEKNY + + +    TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L   EI+  V
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAVVASVSGLTADARIVINRARVECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILSPEEIEKYV 235          
The following BLAST results are available for this feature:
BLAST of CK939467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
PSA7L_MACFA4.137e-8669.57Proteasome subunit alpha type-7-like OS=Macaca fas... [more]
PSA7L_MOUSE1.204e-8569.13Proteasome subunit alpha type-7-like OS=Mus muscul... [more]
PSA7_HUMAN2.053e-8570.61Proteasome subunit alpha type-7 OS=Homo sapiens GN... [more]
PSA7_MOUSE3.502e-8570.61Proteasome subunit alpha type-7 OS=Mus musculus GN... [more]
PSA7_BOVIN3.502e-8570.61Proteasome subunit alpha type-7 OS=Bos taurus GN=P... [more]
PSA7_PONAB3.872e-8469.74Proteasome subunit alpha type-7 OS=Pongo abelii GN... [more]
PSA7B_XENLA8.626e-8469.74Proteasome subunit alpha type-7-B OS=Xenopus laevi... [more]
PSA7A_XENLA8.626e-8469.74Proteasome subunit alpha type-7-A OS=Xenopus laevi... [more]
PSA7L_HUMAN3.278e-8367.37Proteasome subunit alpha type-7-like OS=Homo sapie... [more]
PSA7_RAT2.775e-8268.38Proteasome subunit alpha type-7 OS=Rattus norvegic... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004750_C07 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939467 ID=CK939467; Name=CK939467; organism=Citrus sinensis; type=EST; length=899bp
CTGGGCGGGGANNNTCAAAATAAGAAATANNNNNNAAGCTGGAAAGAAGA
AAAAGAAACTCGAATCAGAGAGACGCAGAAATCGATCGAGAAGAGGAAAA
TTAGAGAGATTTGACATGGCGAGATACGATCGAGCAATCACTGTATTTTC
ACCGGATGGCCACCTGTTCCAAGTGGAATACGCACTAGAGGCCGTACGCA
AAGGCAACGCCGCCGTCGGCGTGCGCGGCACCGACACCATCGTTCTTGGC
GTCGAAAAGAAATCCACTGTCAAGCTTCAGGACTCCAGATCAGTGAGGAA
GATTGTCAGCTTGGATAATCATATTGCATTGGCCTGTGCTGGACTTAAAG
CAGATGCTCGTGTACTGATAAACAGGGCTCGAATAGAATGTCAGAGCCAC
AGGCTGACTGTTGAGGACCCAGTAACTGTTGAGTACATCACTCGTTACAT
TGCAGGTCTCCAGCAGAAGTACACACAAAGCGGTGGTGTGAGACCATTTG
GTCTTTCTACTCTGATTGTGGGCTTTGATCCATACACTGGCGTGCCATCA
CTATATCAGACAGATCCTTCTGGGACATTTTCTGCTTGGAAAGCTAATGC
AACTGGGAGAAACTCTAATTCAATGAGGGAGTTTCTGGAGAAAAACTATA
AGGAAACTTCCGGGCAAGAAACTATAAAGCTTGCAATTCGGGCATTACTT
GAGGTTGTTGAGAGTGGGGGCAAAAACATAGAAGTTGCTGTGATGACAAG
GGAGAAGGGTCTGAAGCAGCTTGATGAAGCTGAAATTGATGCCATGGTAG
CCGAGATTGAAGCAAAGAAGGCCGCCGCTGAGGCTGCAAAGAAGGGACCT
CCCAAGGAAACATGAGTTTTTAGTTCTGGCTTCTGTTTTTTCCATTGCC
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