CK939467

Overview
NameCK939467
Unique NameCK939467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.166e-80
Identity = 155/223 (69.51%), Postives = 182/223 (81.61%), Query Frame = 2
Query:  125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAE 784
            YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS  KLQD R+VRKI +LD+++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS   RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+R   EKNY + + +    TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L   E
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILTSPE 224          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.604e-75
Identity = 134/233 (57.51%), Postives = 182/233 (78.11%), Query Frame = 2
Query:  116 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSR-SVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE----TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            M+ YDRA+++FSPDGH+FQVEYALEAV++G  AVGV+G + +VLG E++ST+KLQD+R +  K+  +D+H+ L+ +GL AD+R+LI +AR+E QSHRLT+EDPVTVEY+TRY+AG+QQ+YTQSGGVRPFG+STLI GFDP    P LYQT+PSG +S+W A   GRNS ++REFLEKNY       + +E +KL +R+LLEVV++G KNIE+ V+  +  +  L   EI+  V
Sbjct:    1 MSGYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYV 233          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2)

HSP 1 Score: 280.411 bits (716), Expect = 9.560e-75
Identity = 143/222 (64.41%), Postives = 174/222 (78.38%), Query Frame = 2
Query:  119 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLD 775
            +RYDRA+T+FSPDGHL QVEYA EAVRKG+ AVGVRG + +VLGVEKKS  +LQ+ R VRKI  LDNH+ +A AGL ADAR++INRA++ECQSHRL VEDPVT+EYITR+IA L+QKYTQS G RPFG+S LI GFD   G   L+QT+PSG F  +KANATGR++  +REF EK+Y+E    +    +KLAIRALLEV +SG  N+EVA+M   K LK LD
Sbjct:    3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDA-DGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRALLEVAQSGQNNLEVAIMENGKPLKMLD 223          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA71_DROVI (Proteasome subunit alpha type-7-1 OS=Drosophila virilis GN=Pros28.1 PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.878e-71
Identity = 144/226 (63.72%), Postives = 175/226 (77.43%), Query Frame = 2
Query:  119 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEI 787
            +RYDRA+T+FSPDG L QVEYA EAVRKG+ AVGVRG + +VLGVEKKS  KLQ+ R+VRKI  LD H+ +A AGL  DAR+LINRA++ECQSHRL VEDPVT+EYITRYIA L+QKYTQS G RPFG+S LI GFD   G P L+QT+PSG F  +KANATG ++ ++REF EK Y+E   ++ +  +KLAIRALLEV +SG  N+EVA+M   K LK LD   I
Sbjct:    3 SRYDRAVTIFSPDGRLLQVEYAQEAVRKGSTAVGVRGGNCVVLGVEKKSVAKLQEDRTVRKICVLD-HVVMAFAGL-TDARILINRAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDA-DGSPYLFQTEPSGIFYEYKANATGCSAKTVREFFEKQYREEEVSTERGAVKLAIRALLEVAQSGQHNLEVAIMENGKPLKMLDRKVI 225          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7_SCHPO (Probable proteasome subunit alpha type-7 OS=Schizosaccharomyces pombe GN=SPBC106.16 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 5.428e-70
Identity = 129/229 (56.33%), Postives = 175/229 (76.42%), Query Frame = 2
Query:  116 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            M+ YDRA++VFSPDG L QVEY  EAVR+G  A+ +RG + IV+GVE+K+  KLQ+  + +KI  +DNH+ LA AGL ADAR+LI++AR+E Q+H+L + DPV++EY+TRY+AG+QQKYTQSGGVRPFG+STLI GFD     P +YQT+P+G ++AWKA A GR S + RE+LEKN+KE  S  ETI LA+ +LLEVV++   NIE+A+M   K ++ L   +ID +V
Sbjct:    1 MSGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDETIHLAVSSLLEVVQTASGNIELAIMDPGKDVEFLHSDKIDTIV 229          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 1.024e-68
Identity = 135/234 (57.69%), Postives = 177/234 (75.64%), Query Frame = 2
Query:  116 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTR---EKGLKQLDEAEIDAMV 799
            M RYDRAIT+FSPDGHLFQVEYA EAV+KG+ AVGVRG D IV+GVEKKS   LQD R++RKI  +D+H+ LA AGL ADARVL++RARIECQS++LT+EDPVTV YI+RYIA  +Q++TQS G RPFG+S LI GFD + G P L++T+PSG +  + ANATGR    +RE+LE+ Y E +  +   T+KL +++L +VV  G +NIE+AVM +   E   + L   EI+A++
Sbjct:    1 MNRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFD-HDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVKSLAQVVPPGSQNIEIAVMKKVNDELQQRVLSTEEIEALL 233          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA72_DROME (Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster GN=Pros28.1A PE=2 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 2.135e-66
Identity = 133/230 (57.83%), Postives = 167/230 (72.61%), Query Frame = 2
Query:  119 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799
            +RY RA+T+FSPDGHL QVEYA EAVRKG+ AVGVRG + +VLGVEK S  ++Q+ R+VRKI  LD H+ALA AGL ADAR+LINR ++ECQSHRL  E+ VT+EYITRY+A L+QKYTQ  G RPFG+S LI G D   G   L+ T+PSG F  +KA ATGR +N++REF EK Y +   T+  + IKLA+RALLEV +     +EVAV+   K +K LD   I  +V
Sbjct:    3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDA-DGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQMRLEVAVLENGKPMKMLDSVVISEIV 231          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.171e-64
Identity = 128/218 (58.72%), Postives = 159/218 (72.94%), Query Frame = 2
Query:  125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLD 775
            YDRAITVFSPDGHLFQVEYA EAVRKG  AVGV+G D+I+  VEKKS  KLQDSR+ RKI  LD HI LA AGL ADARV++N A++ECQ  RL+ ED + V+ + RY+A +QQ+ TQS G RP+G+ST+I GF+   G P L++T+PSGT SAW A A GRN   + EF+EKNY++  +    +  AI+ALLE VESG KNIE+ V+ R K     D
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNE-NGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMTRDRCVHFAIKALLEAVESGSKNIELLVLERGKAAYMSD 219          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA73_DROME (Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster GN=Pros28.1B PE=2 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 1.134e-59
Identity = 119/222 (53.60%), Postives = 156/222 (70.27%), Query Frame = 2
Query:  122 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE--TSGQE--TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLD 775
            RYDRA+T++SPDGHL QVEYA EAVR+G+  +G+R  + IV+GVEK+S   LQ+ R VRKI  LD+H+ +  +GL ADAR+L++RA++E QSHRL  E P TVEYITRYIA L+Q YTQS G RPFGLS L+ GFD   G P L+QTDPSG F  W+AN TGR+S  +R+++EK+  E  T   E   IK  +R L+ V       +EVAV+   + L+ +D
Sbjct:    4 RYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDE-DGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTLVSVSSLNHTQMEVAVLKYRQPLRMID 224          
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.309e-51
Identity = 113/227 (49.78%), Postives = 151/227 (66.52%), Query Frame = 2
Query:  119 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGQETIKLAIRALLEVVES-GGKNIEVAVMT-REKGLKQLDEAEID 790
            A YDRAITVFSPDG LFQV YA EAV++G  AVGV+  + +VL VEK+ T +L +  S  KI  +D+HIA A +G+ ADARVL+NRAR+E Q HRLT  +P  +  I + I  L+Q +TQ GGVRPFG + L+ G +     P LY+TDPSG + AWKA A G   N+     E+ YK + S +E IKLAI AL + +E    +NIEVA++T ++K  ++L   EI+
Sbjct:    8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNE---KPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTMEKPSAENIEVAIITVKDKKFRKLSREEIE 231          
The following BLAST results are available for this feature:
BLAST of CK939467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
PSA7_CHICK1.166e-8069.51Proteasome subunit alpha type-7 OS=Gallus gallus G... [more]
PSA7_YEAST5.604e-7557.51Proteasome component PRE6 OS=Saccharomyces cerevis... [more]
PSA71_DROME9.560e-7564.41Proteasome subunit alpha type-7-1 OS=Drosophila me... [more]
PSA71_DROVI2.878e-7163.72Proteasome subunit alpha type-7-1 OS=Drosophila vi... [more]
PSA7_SCHPO5.428e-7056.33Probable proteasome subunit alpha type-7 OS=Schizo... [more]
PSA7_CAEEL1.024e-6857.69Proteasome subunit alpha type-7 OS=Caenorhabditis ... [more]
PSA72_DROME2.135e-6657.83Proteasome subunit alpha type-7-1A OS=Drosophila m... [more]
PSA7_TRYBB1.171e-6458.72Proteasome subunit alpha type-7 OS=Trypanosoma bru... [more]
PSA73_DROME1.134e-5953.60Proteasome subunit alpha type-7-1B OS=Drosophila m... [more]
PSMA_PYRHO3.309e-5149.78Proteasome subunit alpha OS=Pyrococcus horikoshii ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004750_C07 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939467 ID=CK939467; Name=CK939467; organism=Citrus sinensis; type=EST; length=899bp
CTGGGCGGGGANNNTCAAAATAAGAAATANNNNNNAAGCTGGAAAGAAGA
AAAAGAAACTCGAATCAGAGAGACGCAGAAATCGATCGAGAAGAGGAAAA
TTAGAGAGATTTGACATGGCGAGATACGATCGAGCAATCACTGTATTTTC
ACCGGATGGCCACCTGTTCCAAGTGGAATACGCACTAGAGGCCGTACGCA
AAGGCAACGCCGCCGTCGGCGTGCGCGGCACCGACACCATCGTTCTTGGC
GTCGAAAAGAAATCCACTGTCAAGCTTCAGGACTCCAGATCAGTGAGGAA
GATTGTCAGCTTGGATAATCATATTGCATTGGCCTGTGCTGGACTTAAAG
CAGATGCTCGTGTACTGATAAACAGGGCTCGAATAGAATGTCAGAGCCAC
AGGCTGACTGTTGAGGACCCAGTAACTGTTGAGTACATCACTCGTTACAT
TGCAGGTCTCCAGCAGAAGTACACACAAAGCGGTGGTGTGAGACCATTTG
GTCTTTCTACTCTGATTGTGGGCTTTGATCCATACACTGGCGTGCCATCA
CTATATCAGACAGATCCTTCTGGGACATTTTCTGCTTGGAAAGCTAATGC
AACTGGGAGAAACTCTAATTCAATGAGGGAGTTTCTGGAGAAAAACTATA
AGGAAACTTCCGGGCAAGAAACTATAAAGCTTGCAATTCGGGCATTACTT
GAGGTTGTTGAGAGTGGGGGCAAAAACATAGAAGTTGCTGTGATGACAAG
GGAGAAGGGTCTGAAGCAGCTTGATGAAGCTGAAATTGATGCCATGGTAG
CCGAGATTGAAGCAAAGAAGGCCGCCGCTGAGGCTGCAAAGAAGGGACCT
CCCAAGGAAACATGAGTTTTTAGTTCTGGCTTCTGTTTTTTCCATTGCC
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