CK939467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.713e-45 Identity = 94/218 (43.12%), Postives = 142/218 (65.14%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK----NIEVAVMTREKGL 763 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ +V+ EK+ L D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K +E+ + + GL Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGL 225
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.627e-45 Identity = 101/229 (44.10%), Postives = 145/229 (63.32%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE-TIKLAIRALLEVVES--GGKNIEVAVMTRE-KGLKQLDEAEIDAMV 799 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D +VL V+K+ T +L ++ S+ KI +D HI A +GL ADAR L++RAR+E Q +R++ ++P+ VE I++ I +Q YTQ GGVRP+G + LI G D P L++TDPSG +KA A G N++ E E +Y+E + I L + AL + E +EV V++ E K ++L E++ V Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVD--DNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYV 233
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.893e-45 Identity = 98/229 (42.79%), Postives = 146/229 (63.76%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE-TIKLAIRALLEVVES--GGKNIEVAVMT-REKGLKQLDEAEIDAMV 799 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D +VL V+K+ T +L ++ S+ KI +D+HI A +GL ADAR L++RAR+E Q +R++ ++P+ VE I++ I +Q YTQ GGVRP+G + LI G D +P L++TDPSG +KA A G N++ E E Y++ + I L + AL E +EV +++ ++K ++L E++ V Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVD--DNLPRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDMNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYV 235
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.346e-44 Identity = 102/228 (44.74%), Postives = 148/228 (64.91%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVES-GGKNIEVAVMTRE-KGLKQLDEAEIDAMV 799 YDRAIT+FSP+G L+QVEYA EAVR+G AVG++ D +VL V+++ T KL D S+ KI +D+HI A +GL ADARVLI+RARIE Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E + E ++LA+ AL + E +NI++A++ K ++++ EI+ +V Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGMELALYALSKTTEELKPENIDMAIIKDSGKLVEKISVDEIEKIV 235
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.758e-44 Identity = 98/209 (46.89%), Postives = 138/209 (66.03%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVES-GGKNIEVAVM 745 YDRAIT+FSP+G L+QVEYA EAVR+G AVG++ D +VL V+++ T KL D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YT GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE+ Y E S E ++LAI AL + E +NI++A++ Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENMSVSEGMELAIYALSKTTEELKPENIDMAIV 216
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.758e-44 Identity = 100/225 (44.44%), Postives = 145/225 (64.44%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE-TIKLAIRALLEVVES--GGKNIEVAVMT-REKGLKQLDEAEI 787 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D +VL V+K+ T +L ++ S+ KI +D+HI A +GL ADAR L++RAR+E Q +R++ ++ + VE I++ I +Q YTQ GGVRP+G + LI G D P L++TDPSG +KA A G N++ E E +YKE E I L + AL + E +EV V++ ++K ++L+ E+ Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDKR--PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKEDMNIEAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEV 229
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.758e-44 Identity = 101/228 (44.30%), Postives = 148/228 (64.91%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVES-GGKNIEVAVMTRE-KGLKQLDEAEIDAMV 799 YDRAIT+FSP+G L+QVEYA EAVR+G AVG++ D +VL V+++ T KL D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E + E ++LA+ AL + E +NI++A++ K ++++ EI+ +V Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVNEGMELALYALSKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIV 235
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.758e-44 Identity = 101/228 (44.30%), Postives = 148/228 (64.91%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES-GGKNIEVAVMTRE-KGLKQLDEAEIDAMV 799 YDRAIT+FSP+G L+QVEYA EAVR+G AVG++ D +VL V+++ T KL D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E + E ++LA+ AL + E +NI++A++ K ++++ EI+ +V Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVNEGMELALYALSKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIV 235
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.297e-44 Identity = 101/228 (44.30%), Postives = 147/228 (64.47%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETS-GQETIKLAIRALLEVVES-GGKNIEVAVMTRE-KGLKQLDEAEIDAMV 799 YDRAIT+FSP+G L+QVEYA EAVR+G AVG++ D +VL V+++ T KL D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E E ++LA+ AL + E +NI++A++ K ++++ EI+ +V Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIV 235
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.140e-43 Identity = 91/201 (45.27%), Postives = 131/201 (65.17%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVVESGGK 724 YDRAIT+FSPDG L+QV+YA EAV++G +GV+ +VL EK+ +L D + KI LD+H+ AGL +D R+LI+ AR + HRL ++P+++EY+T+ I+ ++Q YTQ GGVRPFG++ ++ G D P L T+PSG F + A A G+ + E+LEKNYKE Q TI LA+RAL+ ++ G K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGGIDK-GKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEKNYKEDLDIQSTILLALRALMATLKPGEK 209 The following BLAST results are available for this feature:
BLAST of CK939467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939467 ID=CK939467; Name=CK939467; organism=Citrus sinensis; type=EST; length=899bpback to top |