CK939467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.140e-43 Identity = 100/229 (43.67%), Postives = 144/229 (62.88%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVVES--GGKNIEVAVMTRE-KGLKQLDEAEIDAMV 799 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D +VL V+K+ T +L ++ S+ KI +D+HI A +GL ADAR L++RAR+E Q +R++ ++ + VE I++ I +Q YTQ GGVRP+G + LI G D P L++TDPSG +KA A G N++ E E +Y+E I L + AL + E +EV V++ E K ++L E++ V Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVD--DNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYV 235
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.944e-43 Identity = 94/218 (43.12%), Postives = 138/218 (63.30%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK----NIEVAVMTREKGL 763 YDRAIT+FSPDG L+QV+YA EAV+KG +GV+ +VL EK+ +L D S+ K+ LD+H+ + AGL +D R+LI+ AR + HRL ++P+ ++Y+T+ ++ ++Q YTQ GGVRPFG++ +I G D P L T+PSG F + A A G+ + E+ EKNY+E + Q+TI L IRAL ++ G K NIEV + G+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGID-RGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYREDLNMQDTILLGIRALASTLKPGEKLAPSNIEVGFADVDSGM 226
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.944e-43 Identity = 98/228 (42.98%), Postives = 142/228 (62.28%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQET-IKLAIRALLEVVESG----GKNIEVAVMTREKGLKQLDEAEIDA 793 YDR IT+FSPDG L+QVEYA EAV++G A++G+R D +VL V+K+ L + SV KI D+HI +A AG ADAR LI+ AR + Q ++L ++P+ VE +T+ + Q+YTQ GG RPFG++ +I G + G P LY+TDPSGT W+A A G + ++E+LE++Y E+ E I LA+ AL V + G + + + G QL + EI+A Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLMERTSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQYTQVGGARPFGVALIIGGIE--DGEPRLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESLDTEAGIGLALEALASVNDDSLTPEGIGLATVTVDDDDGFSQLSDEEIEA 235
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.657e-43 Identity = 100/227 (44.05%), Postives = 145/227 (63.88%), Query Frame = 2 Query: 119 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVVE--SGGKNIEVAVM-TREKGLKQLDEAEI 787 A YDRAITVFSPDG LFQVEYA EAV++G ++GV+ + IVL V+K+ T KL + +S+ KI +D HI A +GL ADAR +I +AR+E Q +R+T +P+ VE + + I ++Q YTQ GGVRPFG + LI+G G L++TDPSG +KA A G + E EK Y + + I+LA+ A+ E E + +++E+AV+ +K ++L + EI Sbjct: 7 AGYDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFG-TALIIGGVNGRGC-RLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDMNLNQAIELALDAVYEATEGKTTPESVEIAVIEAADKKYRRLPDDEI 231
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.807e-42 Identity = 103/231 (44.59%), Postives = 142/231 (61.47%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGQETIKLAIRALL-----EVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 799 YDR IT+FSPDG L+QVEYA EAV++G A+VG+R D IVL +K+S L + SV KI D+H+ +A AG ADAR LI+ AR + Q +RL +PV +E +T+ + Q+YTQ GG RPFG++ LI G + G P LY+TDPSGT WKA + G + + ++E LE+NY +E S E + LA+R + E+ +G VA T E +L EI A + Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARPFGVALLIGGIE--DGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELSLDEGVGLALRTIAISNDDELTAAGVDVATVASDTEE--FIELTNDEISAYI 236
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.807e-42 Identity = 86/200 (43.00%), Postives = 133/200 (66.50%), Query Frame = 2 Query: 122 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES 715 RYD T+FSP+G L+QVEYA+EA+ +A+GV D +VL EKK T KL Q SRS K+ +D+H+A A AG+ +DA +L+N AR+ Q + L+ ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG +S WKA A G NS + + L+++Y++ + +E + LA++ L + ++S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF-QLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDS 202
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.807e-42 Identity = 86/200 (43.00%), Postives = 133/200 (66.50%), Query Frame = 2 Query: 122 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES 715 RYD T+FSP+G L+QVEYA+EA+ +A+GV D +VL EKK T KL Q SRS K+ +D+H+A A AG+ +DA +L+N AR+ Q + L+ ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG +S WKA A G NS + + L+++Y++ + +E + LA++ L + ++S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF-QLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDS 202
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.807e-42 Identity = 86/200 (43.00%), Postives = 133/200 (66.50%), Query Frame = 2 Query: 122 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES 715 RYD T+FSP+G L+QVEYA+EA+ +A+GV D +VL EKK T KL Q SRS K+ +D+H+A A AG+ +DA +L+N AR+ Q + L+ ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG +S WKA A G NS + + L+++Y++ + +E + LA++ L + ++S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF-QLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDS 202
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSI (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica GN=OsI_021120 PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.807e-42 Identity = 86/200 (43.00%), Postives = 133/200 (66.50%), Query Frame = 2 Query: 122 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES 715 RYD T+FSP+G L+QVEYA+EA+ +A+GV D +VL EKK T KL Q SRS K+ +D+H+A A AG+ +DA +L+N AR+ Q + L+ ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG +S WKA A G NS + + L+++Y++ + +E + LA++ L + ++S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF-QLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDS 202
BLAST of CK939467 vs. ExPASy Swiss-Prot
Match: PSMA2_HALMA (Proteasome subunit alpha 2 OS=Haloarcula marismortui GN=psmA2 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.666e-42 Identity = 96/223 (43.05%), Postives = 140/223 (62.78%), Query Frame = 2 Query: 125 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE-TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEID 790 YDR IT+FSPDG L+QVEYA EAV++G A+VGVR D +V+ ++ + L + S+ KI +D+H+ +A AG ADAR LI+ AR + Q +RL ++P +VE +T+ I Q+YTQ+GG RPFG++ L+ G + G P L++TDPSGT W+A A G + ++ FLE+ Y E E I+LA+RAL V E G V + T + +Q ++ D Sbjct: 9 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGVRTEDGVVIAADRHARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQYTQTGGARPFGVALLVAGIE--DGEPRLFETDPSGTPYEWQAVAIGGSREDIQTFLEEEYAEGMDLEGGIELALRALASVNEDGLDATGVDIATIDVESEQFEKLAED 229 The following BLAST results are available for this feature:
BLAST of CK939467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939467 ID=CK939467; Name=CK939467; organism=Citrus sinensis; type=EST; length=899bpback to top |