CK939449

Overview
NameCK939449
Unique NameCK939449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939449 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.886e-52
Identity = 119/232 (51.29%), Postives = 141/232 (60.78%), Query Frame = 3
Query:   96 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD 791
            ++   V  AKLAEQAERYD+M  AMK V +   EL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E            E +Q++  E                             YKMKGDY+RYL+E   GD K+   +NS +           ++ PTHPIRLGLALNFSVFYYEI+NSP            EAI+ELDTLNEESYKDSTLIMQLLRDNLTLWTS+
Sbjct:    4 DKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERN----------EKKQQMGKE-----------------------------YKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSP------------EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSE 184          
BLAST of CK939449 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.942e-43
Identity = 102/209 (48.80%), Postives = 119/209 (56.94%), Query Frame = 3
Query:  165 AMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD 791
            AMKNV +L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK                                                T F+ KMKGDYYRYLAE   G+++     +S K            + PTHPIRLGLALN+SVFYYEI             AFD+AI+ELDTLNE+SYKDSTLIMQLLRDNLTLWTSD
Sbjct:    3 AMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQK------------------------------------------------TSFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEI------------TAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 151          
BLAST of CK939449 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18
Identity = 45/51 (88.24%), Postives = 49/51 (96.08%), Query Frame = 3
Query:  639 IMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD 791
            I+NSP+RAC+LAKQAFDEAISELD+L EESYKDSTLIMQLL DNLTLWTSD
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSD 51          
BLAST of CK939449 vs. ExPASy Swiss-Prot
Match: U4976_SOYBN (UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.039e-14
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = 3
Query:   81 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEER 215
            MA+SK+RENFVY+AKLAEQAERY+EMV++MKNVA LDVELTVEER
Sbjct:    1 MAASKDRENFVYIAKLAEQAERYEEMVESMKNVANLDVELTVEER 45          
The following BLAST results are available for this feature:
BLAST of CK939449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
1433B_SHEEP1.886e-5251.2914-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]
1433G_SHEEP7.942e-4348.8014-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]
1433X_MAIZE1.045e-1888.2414-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]
U4976_SOYBN2.039e-1484.44UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004750_E03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939449 ID=CK939449; Name=CK939449; organism=Citrus sinensis; type=EST; length=798bp
GGGGGTTGTAAAGGCGAAGAAAGAGAGAGGAATCTATTGAGACTACAGTA
AAACCCTAATCTCTTCCTCGGAGATCGGCCATGGCTTCCTCTAAAGAACG
CGAAAACTTCGTCTACGTCGCCAAGCTCGCTGAACAAGCCGAGCGCTACG
ACGAGATGGTGGATGCGATGAAAAATGTTGCGAAGCTTGATGTGGAATTG
ACGGTTGAGGAGCGCAACTTGCTCTCTGTTGGCTACAAGAATGTAATTGG
TGCTCGAAGAGCATCATGGAGGATACTTTCGTCAATTGAGCAAAAGGAAG
AAGCGAAAGGGAATGAAGTGAATGCGAAGCGGATCAAGGAGTATAGGCAA
AAGGTTGAATCTGAATTGTCGGACATTTGCAATGATATCATGACTGTCAT
TGATGAGCATCTTATTCCTTCAGCAAGTGCTGGTGAATCAACTGTGTTCT
TCTATAAGATGAAAGGAGATTATTATCGGTACCTTGCTGAATTCAAGTTT
GGCGATGAGAAGAAAGAGGCTGCTGCTAATTCAATGAAAGCGTATGAGAC
AGCTACCACTGCTGCAGAGGCTGATTTGCCACCTACACATCCCATCCGAT
TGGGTTTGGCTCTGAATTTCTCTGTCTTTTATTATGAGATCATGAATTCT
CCTGAAAGGGCTTGCCATCTTGCAAAACAAGCTTTTGATGAAGCTATTTC
CGAGCTGGACACCCTCAACGAGGAGTCCTACAAAGACAGCACCTTAATTA
TGCAGCTTCTTAGGGACAACCTTACCTTATGGACTTCTGACATTCCAG
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