EG358186

Overview
NameEG358186
Unique NameEG358186
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6849 contig Csv1_Contig6849:1..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.824e-31
Identity = 71/144 (49.31%), Postives = 93/144 (64.58%), Query Frame = 3
Query:  354 RRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFTNARIDWKETPQAHVFKADLPELMIE*VNVEVEECRILQITGERSKEHE---EQNDKWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTVPKQEEKKPEV 776
            R  NV DP S+D W   D F +       S A      TN R+DWKETP AHVF ADLP +  +   VEVE+  +L I+GER++E +   + +++WH V RSS KF RRFRLP  A+V+ V  SMD+GVLT+TVPK+E KKP++
Sbjct:    5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQL 143          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.631e-28
Identity = 64/143 (44.76%), Postives = 95/143 (66.43%), Query Frame = 3
Query:  348 GGRRTNVFDPFSLDVWDPF-DGFLSSALTNAPSSARETSQF-TNARIDWKETPQAHVFKADLPELMIE*VNVEVEECRILQITGERSKEHEEQNDKWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTVPKQEEKKP 770
            GG      +P S+D+ +PF D    +A   APS+A   +   + A +DWKET  AHVF AD+P +  E V VEVEE ++L+I+G+R++  EE+ ++WHRV RSS +F+R  RLP NA  + V  ++D+GVLT+T+PK  ++KP
Sbjct:   26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTITIPKDNDRKP 168          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.264e-24
Identity = 51/93 (54.84%), Postives = 68/93 (73.12%), Query Frame = 3
Query:  474 ARIDWKETPQAHVFKADLPELMIE*VNVEVEECRILQITGERSKEHEEQNDKWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTVPK 752
            AR+DWKETP+ HV   D+P L  E + VEVEE R+L+++GER KE E++ D WHRV RS  KF R+FRLP N  ++ VK  +++GVLTLT+ K
Sbjct:   67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDK 159          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.064e-23
Identity = 49/100 (49.00%), Postives = 71/100 (71.00%), Query Frame = 3
Query:  468 TNARIDWKETPQAHVFKADLPELMIE*VNVEVEECRILQITGERSKEHEEQNDKWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTVPKQEEKK 767
            ++AR+DWKETP+ HV   D+P L  + + +EVEE R+L+++GER KE +++ D WHRV RS  KF R+F+LP N  ++ VK  M++GVLTLT+ K    K
Sbjct:   73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLSHDK 172          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.695e-23
Identity = 63/139 (45.32%), Postives = 89/139 (64.03%), Query Frame = 3
Query:  366 VFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFTNARIDWKETPQAHVFKADLPE-LMIE*VNVEVEECRILQITGERSKEHEEQNDKWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTVPK-QEEKKPEV 776
            +FD  + D W+PF  F ++   +A   A +TS F N  I+ +ET +A+VF+ADLP  +  E V VEV+E  +L ITGERS   EE+  + H + RS A F  RF LPD+A V+ V+ SMD G+LT+TVPK   +K+P +
Sbjct:    6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVTVPKVVTDKQPAI 143          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.932e-21
Identity = 49/107 (45.79%), Postives = 73/107 (68.22%), Query Frame = 3
Query:  450 RETS-QFTNARIDWKETPQAHVFKADLPELMIE*VNVEVEECRILQITGERSKEHEEQNDKWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTVPKQEEKK 767
            R+TS   + AR+DWKET + H    D+P L  + V +EVEE  +L+++GER +E E++ D+WHRV RS  KF R+F+LPDN  +E VK  +++GVLT+ + K   +K
Sbjct:   62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEK 168          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.635e-20
Identity = 47/67 (70.15%), Postives = 58/67 (86.57%), Query Frame = 3
Query:  576 ILQITGERSKEHEEQNDKWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTVPKQEEKKPEV 776
            ILQI+GER+ E E++ND WHRV RSS KF+R FRLPDNAKV+ VK SM++GVLT+TVPK+E KKP+V
Sbjct:    1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDV 67          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.453e-18
Identity = 57/150 (38.00%), Postives = 82/150 (54.67%), Query Frame = 3
Query:  327 ALIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFTNARIDWKETPQAHVFKADLPELMIE*VNVEVEEC-RILQITGER-----SKEHEEQND--KWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTVPK 752
            AL+P  +G    + F         P  G  ++A    P++         AR DWKETP+AHV   D+P +    V VEV+E  R+L+++GER     ++E E + D  +WHR  R++ +F RRFR+P  A V  V   +D GVLT+TVPK
Sbjct:   29 ALVPYGYGYMLDDPFRVLEQSPLRPAGGVAAAAAAGEPAAV------ALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVPK 172          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.210e-17
Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE +G++ LTGEKV SPGEEFDKVFTAMC+GK+IDPMLECL+EWNGA
Sbjct:  668 VREDIGTSLLTGEKVRSPGEEFDKVFTAMCEGKLIDPMLECLKEWNGA 715          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL1_ARATH (Phenylalanine ammonia-lyase 1 OS=Arabidopsis thaliana GN=PAL1 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.210e-17
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG+  LTGEKVTSPGEEFDKVFTA+C+GKIIDPM+ECL EWNGA
Sbjct:  673 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGA 720          
The following BLAST results are available for this feature:
BLAST of EG358186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
HS166_ORYSJ7.824e-3149.3116.6 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS189_ORYSJ1.631e-2844.7618.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP41_SOYBN9.264e-2454.8422.0 kDa class IV heat shock protein OS=Glycine ma... [more]
HSP41_PEA2.064e-2349.0022.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HS17B_ORYSJ2.695e-2345.3217.9 kDa heat shock protein 2 OS=Oryza sativa subs... [more]
HSP22_ARATH1.932e-2145.7922.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HSP12_SOYBN1.635e-2070.15Class I heat shock protein (Fragment) OS=Glycine m... [more]
HS219_ORYSJ4.453e-1838.0021.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
PALY_CITLI2.210e-1781.25Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PAL1_ARATH2.210e-1783.33Phenylalanine ammonia-lyase 1 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank description3a7 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0003a7, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358186 ID=EG358186; Name=EG358186; organism=Citrus sinensis; type=EST; length=859bp
TCGTGAGGGAGGGGCTCGGGTCTAATTTTCTAACAGGGGAAAAAGTTACA
TCGCCCGGCGAGGAATTTGACAAAGTTTTTACAGCAATGTGCCAGGGCAA
GATCATTGATCCAATGCTGGAATGTCTCAGGGAATGGAATGGCGCCCCTC
TTCCAATTTGTTAGTTGTTTTTATTTTGTTTAATAACATGGTCTTCAATC
CCTTGTGTTCTTGTGTTCATAGAATTTGCCCATGCGAGTCAGTGGTACGC
GGGATCTTCGAACTGATTGATCAAAACACTTCTGAAGTTGTTGAGCATTT
AATTACCGCCCCAGGTTGCCTTAATGGCACTCATTCCAAGCATCTTCGGG
GGCCGAAGAACCAACGTGTTCGATCCATTTTCATTAGATGTATGGGATCC
TTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGCCGTCTTCTGCTA
GGGAAACATCCCAATTCACCAATGCAAGAATTGACTGGAAAGAGACTCCT
CAGGCTCATGTATTCAAGGCTGATCTTCCAGAGCTGATGATAGAATAAGT
GAATGTTGAGGTTGAAGAGTGCAGGATTCTGCAGATAACCGGGGAGAGGA
GCAAGGAGCATGAAGAGCAGAATGACAAGTGGCATCGCGTCTAGAGGAGC
AGTGCCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGCTAAGGTGGA
GCACGTTAAGGTCAGCATGGACCATGGTGTGCTCACACTGACTGTTCCTA
AACAGGAGGAGAAGAAACCTGAAGTTACACCCCATTGAGATCTCTGGCTA
AGTGATCAAGTGTTGATGTCTTTCAAGATAGTGTCTTTCGGCTCGCTAAT
ACAACTTGG
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