EG358186

Overview
NameEG358186
Unique NameEG358186
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.213e-15
Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 3
Query:  468 TNARIDWKETPQAHVFKADLPELMIE*VNVEVEECRILQITGERSKEHEEQNDKWHRV*RSS-----AKFLRRFRLPDNAKVEHVKVSMDHGVLTLTVPKQEEKK 767
            + A IDW E+  +H+FK ++P    E + V++EE  +L I GE  KE +++N  WH   R +     ++FLRR  LP+N KV+ VK  +++GVLT+ VPK    K
Sbjct:   20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSK 124          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PALY_VITVI (Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera GN=PAL PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.584e-15
Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG+  LTGEKV SPGE+FDKVFTAMC+GKIIDP+L+CL  WNGA
Sbjct:  364 VREELGTGLLTGEKVRSPGEDFDKVFTAMCEGKIIDPLLDCLSAWNGA 411          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.584e-15
Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VREGLG+  LTGEKV SPGEE DKVFTAMC+G IIDP+LECL+ W+GA
Sbjct:  655 VREGLGTELLTGEKVRSPGEECDKVFTAMCEGSIIDPLLECLKSWDGA 702          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.069e-15
Identity = 35/48 (72.92%), Postives = 44/48 (91.67%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG+  LTGEKV SPGEEFDKVFTA+C+G++IDP+++CL+EWNGA
Sbjct:  662 VREELGTELLTGEKVRSPGEEFDKVFTALCKGEMIDPLMDCLKEWNGA 709          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.528e-15
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG++ LTGE+V SPGEE DK+FTAMCQGKIIDP+L+CL EWNGA
Sbjct:  673 VREELGTSLLTGERVISPGEECDKLFTAMCQGKIIDPLLKCLGEWNGA 720          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.528e-15
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG++ LTGEKV SPGEE DK+FTA+CQGKIIDP+LECL +WNGA
Sbjct:  672 VREELGTSLLTGEKVISPGEECDKLFTAICQGKIIDPLLECLGDWNGA 719          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.608e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 3
Query:   15 LGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            +GS FLTGEKV SPGEEFDKVF A+C+GK IDPML+CL+EWNGA
Sbjct:  655 VGSGFLTGEKVVSPGEEFDKVFNAICEGKAIDPMLDCLKEWNGA 698          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.608e-15
Identity = 47/119 (39.50%), Postives = 67/119 (56.30%), Query Frame = 3
Query:  432 NAPSS--ARETSQFTNARIDWKETPQAHVFKADLPELMIE*VNVEVEECRILQITGERSKEHEEQNDKWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTV---PKQEEKKPE 773
            NAPS    R+         D KE P ++VF  D+P L    + V+VEE  +L I+GER +E E++  K+ R+ R   KF+R+F LP+NA  + +      GVLT+TV   P  E KKP+
Sbjct:   30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPK 148          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL1_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=TPA1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.019e-15
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VR+ LG+  LTGEKV SPGEE DKVFTAMC G+IIDPMLECL+ WNGA
Sbjct:  663 VRKELGTELLTGEKVRSPGEECDKVFTAMCNGQIIDPMLECLKSWNGA 710          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PALY_MEDSA (Phenylalanine ammonia-lyase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.861e-15
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG+  LTGE V SPGEE DK+F+AMCQGKIIDP+LECL EWNGA
Sbjct:  673 VREELGTGLLTGENVISPGEECDKLFSAMCQGKIIDPLLECLGEWNGA 720          
The following BLAST results are available for this feature:
BLAST of EG358186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
HS157_ARATH1.213e-1540.0015.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
PALY_VITVI1.584e-1577.08Phenylalanine ammonia-lyase (Fragment) OS=Vitis vi... [more]
PAL1_IPOBA1.584e-1577.08Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PALY_CAMSI2.069e-1572.92Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PALY_TRISU3.528e-1577.08Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PAL2_PEA3.528e-1577.08Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PALY_BROFI4.608e-1579.55Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
HSP21_SOLPE4.608e-1539.5017.3 kDa class II heat shock protein OS=Solanum pe... [more]
PAL1_TOBAC6.019e-1577.08Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PALY_MEDSA7.861e-1577.08Phenylalanine ammonia-lyase OS=Medicago sativa PE=... [more]

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Properties
Property NameValue
Genbank description3a7 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0003a7, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358186 ID=EG358186; Name=EG358186; organism=Citrus sinensis; type=EST; length=859bp
TCGTGAGGGAGGGGCTCGGGTCTAATTTTCTAACAGGGGAAAAAGTTACA
TCGCCCGGCGAGGAATTTGACAAAGTTTTTACAGCAATGTGCCAGGGCAA
GATCATTGATCCAATGCTGGAATGTCTCAGGGAATGGAATGGCGCCCCTC
TTCCAATTTGTTAGTTGTTTTTATTTTGTTTAATAACATGGTCTTCAATC
CCTTGTGTTCTTGTGTTCATAGAATTTGCCCATGCGAGTCAGTGGTACGC
GGGATCTTCGAACTGATTGATCAAAACACTTCTGAAGTTGTTGAGCATTT
AATTACCGCCCCAGGTTGCCTTAATGGCACTCATTCCAAGCATCTTCGGG
GGCCGAAGAACCAACGTGTTCGATCCATTTTCATTAGATGTATGGGATCC
TTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGCCGTCTTCTGCTA
GGGAAACATCCCAATTCACCAATGCAAGAATTGACTGGAAAGAGACTCCT
CAGGCTCATGTATTCAAGGCTGATCTTCCAGAGCTGATGATAGAATAAGT
GAATGTTGAGGTTGAAGAGTGCAGGATTCTGCAGATAACCGGGGAGAGGA
GCAAGGAGCATGAAGAGCAGAATGACAAGTGGCATCGCGTCTAGAGGAGC
AGTGCCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGCTAAGGTGGA
GCACGTTAAGGTCAGCATGGACCATGGTGTGCTCACACTGACTGTTCCTA
AACAGGAGGAGAAGAAACCTGAAGTTACACCCCATTGAGATCTCTGGCTA
AGTGATCAAGTGTTGATGTCTTTCAAGATAGTGTCTTTCGGCTCGCTAAT
ACAACTTGG
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