EG358186

Overview
NameEG358186
Unique NameEG358186
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6849 contig Csv1_Contig6849:1..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL1_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.861e-15
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 3 
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG+  LTGEKV SPGEE DKVFTA+C G+IIDP+LECL+ WNGA
Sbjct:  652 VREELGTELLTGEKVRSPGEEIDKVFTAICNGQIIDPLLECLKSWNGA 699
[Close]
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.027e-14
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 3 
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG+  LTGEKV SPGEE DKVFTAMC G+IID +LECL+EWNGA
Sbjct:  660 VREELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGA 707
[Close]
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.027e-14
Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 3 
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG+ +LTGEKV SPGEE DKVFTA+C+GKIIDP+L+CL  WNGA
Sbjct:  665 VREELGAEYLTGEKVRSPGEECDKVFTAICEGKIIDPILDCLEGWNGA 712
[Close]
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL3_PETCR (Phenylalanine ammonia-lyase 3 OS=Petroselinum crispum GN=PAL3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.341e-14
Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 3 
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG+ +LTGEKV SPGEEF+KVFTAM +G+IIDP+LECL  WNGA
Sbjct:  666 VREELGTEYLTGEKVRSPGEEFEKVFTAMSKGEIIDPLLECLESWNGA 713
[Close]
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.341e-14
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 3 
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG++ LTGEK+ SPGEE DKVF A+C G+ IDPML+CL+EWNGA
Sbjct:  666 VRENLGTSLLTGEKIRSPGEECDKVFAALCDGRFIDPMLDCLKEWNGA 713
[Close]
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL1_LITER (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.341e-14
Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 3 
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VRE LG+  LTGEKV SPGEE DKVFTAMC+GK++DP+L CL  WNGA
Sbjct:  658 VREELGTELLTGEKVRSPGEELDKVFTAMCEGKLVDPLLACLEAWNGA 705
[Close]
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.341e-14
Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 3 
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            +RE LG+ +LTGEKVTSPGEEFDKVFTAM +G+IIDP+L CL  WNGA
Sbjct:  656 IREELGTVYLTGEKVTSPGEEFDKVFTAMSKGEIIDPLLACLESWNGA 703
[Close]
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.287e-14
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 3 
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VR+ LG+  LTGEKV SPGEE DK+FTA+CQGKIIDP+L+CL +WNGA
Sbjct:  671 VRQELGTGLLTGEKVISPGEECDKLFTAICQGKIIDPLLQCLGDWNGA 718
[Close]
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.987e-14
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 3 
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VR+ LG  +LTGEKVTSPGEEFDKVF AM +G+IIDP+LECL  WNGA
Sbjct:  664 VRKELGIEYLTGEKVTSPGEEFDKVFIAMSKGEIIDPLLECLESWNGA 711
[Close]
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.901e-14
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 3 
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VR+ LG+ +LTGEKVTSPGEEF+KVF AM +G+IIDP+LECL  WNGA
Sbjct:  664 VRKELGTEYLTGEKVTSPGEEFEKVFIAMSKGEIIDPLLECLESWNGA 711
The following BLAST results are available for this feature:
BLAST of EG358186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PAL1_SOLLC7.861e-1575.00Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL3_TOBAC1.027e-1477.08Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL1_PRUAV1.027e-1475.00Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]
PAL3_PETCR1.341e-1475.00Phenylalanine ammonia-lyase 3 OS=Petroselinum cris... [more]
PAL2_CICAR1.341e-1470.83Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL1_LITER1.341e-1472.92Phenylalanine ammonia-lyase 1 OS=Lithospermum eryt... [more]
PAL1_DAUCA1.341e-1475.00Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PAL1_PEA2.287e-1472.92Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PAL2_PETCR2.987e-1475.00Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]
PAL1_PETCR3.901e-1472.92Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]

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Properties
Property NameValue
Genbank description3a7 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0003a7, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358186 ID=EG358186; Name=EG358186; organism=Citrus sinensis; type=EST; length=859bp
TCGTGAGGGAGGGGCTCGGGTCTAATTTTCTAACAGGGGAAAAAGTTACA
TCGCCCGGCGAGGAATTTGACAAAGTTTTTACAGCAATGTGCCAGGGCAA
GATCATTGATCCAATGCTGGAATGTCTCAGGGAATGGAATGGCGCCCCTC
TTCCAATTTGTTAGTTGTTTTTATTTTGTTTAATAACATGGTCTTCAATC
CCTTGTGTTCTTGTGTTCATAGAATTTGCCCATGCGAGTCAGTGGTACGC
GGGATCTTCGAACTGATTGATCAAAACACTTCTGAAGTTGTTGAGCATTT
AATTACCGCCCCAGGTTGCCTTAATGGCACTCATTCCAAGCATCTTCGGG
GGCCGAAGAACCAACGTGTTCGATCCATTTTCATTAGATGTATGGGATCC
TTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGCCGTCTTCTGCTA
GGGAAACATCCCAATTCACCAATGCAAGAATTGACTGGAAAGAGACTCCT
CAGGCTCATGTATTCAAGGCTGATCTTCCAGAGCTGATGATAGAATAAGT
GAATGTTGAGGTTGAAGAGTGCAGGATTCTGCAGATAACCGGGGAGAGGA
GCAAGGAGCATGAAGAGCAGAATGACAAGTGGCATCGCGTCTAGAGGAGC
AGTGCCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGCTAAGGTGGA
GCACGTTAAGGTCAGCATGGACCATGGTGTGCTCACACTGACTGTTCCTA
AACAGGAGGAGAAGAAACCTGAAGTTACACCCCATTGAGATCTCTGGCTA
AGTGATCAAGTGTTGATGTCTTTCAAGATAGTGTCTTTCGGCTCGCTAAT
ACAACTTGG
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