EG358186

Overview
NameEG358186
Unique NameEG358186
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6849 contig Csv1_Contig6849:1..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL2_LITER (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VR  LG+  LTGEKV SPGEE D+VF A+C+GK++DP+L CL  WNGA
Sbjct:  653 VRGELGTELLTGEKVRSPGEELDQVFNALCEGKLVDPLLACLEAWNGA 700          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL1_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=PAL PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNG 143
            VRE LG  FLTGEK+ SPGEE +KVF  + QGK+IDPML+CL+EWNG
Sbjct:  649 VREELGCVFLTGEKLKSPGEECNKVFLGISQGKLIDPMLDCLKEWNG 695          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12
Identity = 41/113 (36.28%), Postives = 65/113 (57.52%), Query Frame = 3
Query:  450 RETSQFTNARIDWKETPQAHVFKADLPELMIE*VNVEVEECRILQITGERSKEHEEQND--KWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTV---PKQEEKKPE 773
            R+         D KE P ++VF AD+P +    + V+VE+  +L ++GER++  +++ D  K+ R+ R   KF+R+F LP+NA VE +      GVL +TV   P  E KKP+
Sbjct:   48 RDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEKLPPPEPKKPK 160          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12
Identity = 43/124 (34.68%), Postives = 62/124 (50.00%), Query Frame = 3
Query:  402 FDGFLSSALTNAPSSARETSQFTNARIDWKETPQAHVFKADLPELMIE*VNVEVEECRILQITGER-----SKEHEEQNDK-WHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTVPKQ 755
            F G     L   P      S    A +DW ETP +HV + ++P L  + V V+VE+  +L + G        KE E + D  WH   R   +F R   LP   +VE ++ S+D+GVLT+ VPK+
Sbjct:    6 FGGPFRRILYGRPFPPDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPKE 129          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.796e-12
Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:  483 DWKETPQAHVFKADLPELMIE*VNVEVEECRILQITGERSKEHEEQNDKWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLTV---PKQEEKKPE 773
            D KE   A+ F  D+P L    + V+VE+ R+L I+GER +E E ++ K+ R+ R   KF+R+F LPDNA V+ V      GVLT+TV   P  E KKP+
Sbjct:   49 DVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRRE-EREDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPK 147          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PALY_WHEAT (Phenylalanine ammonia-lyase OS=Triticum aestivum GN=PAL PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNG 143
            VR+ LG+ +LTGEK  SPGEE DKVF AM QGK ID +LECL+EWNG
Sbjct:  648 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNG 694          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL3_ARATH (Phenylalanine ammonia-lyase 3 OS=Arabidopsis thaliana GN=PAL3 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12
Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 146
            VR  L +  LTGE V SPGE+FDKVF A+ QGK+IDP+ ECL+EWNGA
Sbjct:  642 VRNELETRLLTGEDVRSPGEDFDKVFRAISQGKLIDPLFECLKEWNGA 689          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=ZB8 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.812e-11
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNG 143
            VRE LG+ +LTGEK  SPGEE +KV  A+ +GK IDP+LECL+EWNG
Sbjct:  661 VREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNG 707          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSI (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. indica GN=ZB8 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.812e-11
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 3
Query:    3 VREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNG 143
            VRE LG+ +LTGEK  SPGEE +KV  A+ +GK IDP+LECL+EWNG
Sbjct:  661 VREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNG 707          
BLAST of EG358186 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11
Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:  483 DWKETPQAHVFKADLPELMIE*VNVEVEECRILQITGERSKEHEE-QNDKWHRV*RSSAKFLRRFRLPDNAKVEHVKVSMDHGVLTLT---VPKQEEKKP 770
            D KE P ++VF  D+P L    + V+V+   +L I+GER +E EE +  K+ R+ R   K +R+F LP+NA  E +      GVLT+T   VP  E KKP
Sbjct:   48 DVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKP 147          
The following BLAST results are available for this feature:
BLAST of EG358186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PAL2_LITER2.141e-1264.58Phenylalanine ammonia-lyase 2 OS=Lithospermum eryt... [more]
PAL1_ORYSJ2.141e-1270.21Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
HSP22_IPONI2.141e-1236.2818.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP16_ORYSJ2.141e-1234.6816.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]
HSP23_MAIZE2.796e-1244.0017.0 kDa class II heat shock protein OS=Zea mays G... [more]
PALY_WHEAT4.769e-1270.21Phenylalanine ammonia-lyase OS=Triticum aestivum G... [more]
PAL3_ARATH4.769e-1266.67Phenylalanine ammonia-lyase 3 OS=Arabidopsis thali... [more]
PAL2_ORYSJ1.812e-1165.96Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL2_ORYSI1.812e-1165.96Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
HSP21_IPONI6.886e-1141.0017.2 kDa class II heat shock protein OS=Ipomoea ni... [more]

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Properties
Property NameValue
Genbank description3a7 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0003a7, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358186 ID=EG358186; Name=EG358186; organism=Citrus sinensis; type=EST; length=859bp
TCGTGAGGGAGGGGCTCGGGTCTAATTTTCTAACAGGGGAAAAAGTTACA
TCGCCCGGCGAGGAATTTGACAAAGTTTTTACAGCAATGTGCCAGGGCAA
GATCATTGATCCAATGCTGGAATGTCTCAGGGAATGGAATGGCGCCCCTC
TTCCAATTTGTTAGTTGTTTTTATTTTGTTTAATAACATGGTCTTCAATC
CCTTGTGTTCTTGTGTTCATAGAATTTGCCCATGCGAGTCAGTGGTACGC
GGGATCTTCGAACTGATTGATCAAAACACTTCTGAAGTTGTTGAGCATTT
AATTACCGCCCCAGGTTGCCTTAATGGCACTCATTCCAAGCATCTTCGGG
GGCCGAAGAACCAACGTGTTCGATCCATTTTCATTAGATGTATGGGATCC
TTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGCCGTCTTCTGCTA
GGGAAACATCCCAATTCACCAATGCAAGAATTGACTGGAAAGAGACTCCT
CAGGCTCATGTATTCAAGGCTGATCTTCCAGAGCTGATGATAGAATAAGT
GAATGTTGAGGTTGAAGAGTGCAGGATTCTGCAGATAACCGGGGAGAGGA
GCAAGGAGCATGAAGAGCAGAATGACAAGTGGCATCGCGTCTAGAGGAGC
AGTGCCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGCTAAGGTGGA
GCACGTTAAGGTCAGCATGGACCATGGTGTGCTCACACTGACTGTTCCTA
AACAGGAGGAGAAGAAACCTGAAGTTACACCCCATTGAGATCTCTGGCTA
AGTGATCAAGTGTTGATGTCTTTCAAGATAGTGTCTTTCGGCTCGCTAAT
ACAACTTGG
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