CK939443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939443 vs. ExPASy Swiss-Prot
Match: NU1C_NICSY (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nicotiana sylvestris GN=ndhA PE=3 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.979e-79 Identity = 152/184 (82.61%), Postives = 166/184 (90.22%), Query Frame = 3 Query: 24 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 575 MII T E++ INSFS+LESL+EVYGI+W+L PI VL ITIGVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLL KENL+PS G++ LFSIGPSIAVI+I LSY VIPF +LVLADL+IG+F WIAISSIAP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL LCVLSISL Sbjct: 1 MIIDTTEIETINSFSKLESLKEVYGIIWMLFPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLLKENLIPSTGDTRLFSIGPSIAVISIFLSYSVIPFGDHLVLADLSIGVFFWIAISSIAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLALCVLSISL 184
BLAST of CK939443 vs. ExPASy Swiss-Prot
Match: NU1C_SPIOL (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Spinacia oleracea GN=ndhA PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.375e-79 Identity = 153/180 (85.00%), Postives = 164/180 (91.11%), Query Frame = 3 Query: 36 TPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 575 T +VQ INSFSRLE L+EVY +W+L PI I VL ITIGVLVIVWLEREISA IQQRIGPEYA PLGILQALADGTKLLFKENLLPSRG++ LFSIGPSIAVI+ILL YL+IPF LVLADL+IG+FLWIA+SSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 7 TTKVQAINSFSRLEFLKEVYETIWMLFPILILVLGITIGVLVIVWLEREISASIQQRIGPEYAGPLGILQALADGTKLLFKENLLPSRGDTYLFSIGPSIAVISILLGYLIIPFGSRLVLADLSIGVFLWIAVSSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 186
BLAST of CK939443 vs. ExPASy Swiss-Prot
Match: NU1C_ARAHI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Arabis hirsuta GN=ndhA PE=3 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 9.821e-79 Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 3 Query: 24 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 575 MII EV+ INSF RLESL+E+Y ++W+ PI VL I GVLVI W+ERE+SAGIQQRIGPEYA PLGILQALADGTKLLFKE+L PSRGN+ LFSIGPSIAVI+ILLSY VIPFS +LVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 1 MIIYATEVETINSFVRLESLKELYSLVWIFVPIFSLVLGIITGVLVIAWIERELSAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CK939443 vs. ExPASy Swiss-Prot
Match: NU1C_NANDO (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nandina domestica GN=ndhA PE=3 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.188e-78 Identity = 153/185 (82.70%), Postives = 168/185 (90.81%), Query Frame = 3 Query: 24 MIIATPEVQD-INSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 575 MII T +VQ INSFSR ESL+EVYG++W+L PI +L I IGVLVIVWLER+ISAG+QQRIGPEYA PLGILQALADGTKLLFKE+LLPSRG+ LFS+GPSIAVI+ILLSY VIPF Y+LVLADL+IG+FLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLT CVLSISL Sbjct: 1 MIIDTTKVQQAINSFSRSESLKEVYGLIWLLVPIFTPLLGIIIGVLVIVWLERQISAGVQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDILLFSLGPSIAVISILLSYSVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTPCVLSISL 185
BLAST of CK939443 vs. ExPASy Swiss-Prot
Match: NU1C_ILLOL (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Illicium oligandrum GN=ndhA PE=3 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.188e-78 Identity = 151/186 (81.18%), Postives = 165/186 (88.71%), Query Frame = 3 Query: 24 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 581 MII T EVQ INSFSR ES +E YG++W+L PI V I IGVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKE+LLPSRG+ LFS+GPSIAVI+ILLSY VIPF Y L++AD++IG+FLWIAISSIAPIGLLMSGYGSNNKYSF GGLRAAAQSISYEIPLT CVLSISLR+ Sbjct: 1 MIIDTTEVQAINSFSRSESSKEFYGLIWLLVPIFTPVSGILIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLSYSVIPFGYRLIIADISIGVFLWIAISSIAPIGLLMSGYGSNNKYSFSGGLRAAAQSISYEIPLTPCVLSISLRL 186
BLAST of CK939443 vs. ExPASy Swiss-Prot
Match: NU1C_AMBTC (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Amborella trichopoda GN=ndhA PE=3 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 2.857e-78 Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 3 Query: 24 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 575 MII T EVQ INSFSRLES +EVYG++W+ PI V ITIGVLVIVWLEREISAGIQQRIGPEYA PLGILQA+ADGTKLLFKE+LLPSRG+ LFSIGPS+ VI+ILLS+LVIPF Y LVLADL+IG+ LWIAISSIAPIGLLMSGY SNNKYSF GGLRAAAQSISYEIPLTLCVLSISL Sbjct: 1 MIIDTTEVQAINSFSRLESSKEVYGLIWLFIPIFTPVSGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQAIADGTKLLFKEDLLPSRGDIRLFSIGPSVVVISILLSHLVIPFGYRLVLADLSIGVSLWIAISSIAPIGLLMSGYASNNKYSFSGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CK939443 vs. ExPASy Swiss-Prot
Match: NU1C_DRIGR (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Drimys granadensis GN=ndhA PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 4.874e-78 Identity = 155/184 (84.24%), Postives = 164/184 (89.13%), Query Frame = 3 Query: 24 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 575 MII T EVQ INSFSR ESL+E YG++ +L PI V ITIGVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKE+LLPSRG+ LFSIGPSIAVI+ILLSY VIPF Y LVLADL+IG+FLWIAISSIAPIGLLMSGYGSNNKYSF GGLRAAAQSISYEIPLT CVLSISL Sbjct: 1 MIIDTTEVQAINSFSRSESLKEGYGLIGMLVPIFTPVSGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYSVIPFGYRLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFSGGLRAAAQSISYEIPLTPCVLSISL 184
BLAST of CK939443 vs. ExPASy Swiss-Prot
Match: NU1C_PHAVU (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Phaseolus vulgaris GN=ndhA PE=3 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.418e-77 Identity = 145/184 (78.80%), Postives = 161/184 (87.50%), Query Frame = 3 Query: 24 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 575 MII E+QDI+ F RLE +E+Y ILWV PI I+++ ITI VL IVWLEREISAGIQQRIGPEY P G+LQALADGTKLLFKENL+PSRG+ LFS GP+I+VI+I+LSY VIPF YN VL+DLNIG+FLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 1 MIIDLTEIQDIHFFFRLEFFKEIYEILWVFVPILIFIVGITISVLAIVWLEREISAGIQQRIGPEYTGPFGVLQALADGTKLLFKENLIPSRGDIRLFSFGPAISVISIILSYSVIPFGYNFVLSDLNIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CK939443 vs. ExPASy Swiss-Prot
Match: NU1C_AETCO (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Aethionema cordifolium GN=ndhA PE=3 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.201e-76 Identity = 150/184 (81.52%), Postives = 161/184 (87.50%), Query Frame = 3 Query: 24 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 575 MII EVQ INSF RLES +EVYG++W PI V+ I GVLV+VWLEREISA IQQRIGPEYA LGILQALADG KLLFKENL PSRGN++LFSIGPS+AVI+ILLSY VIPFS +LVLAD NIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC+LSISL Sbjct: 1 MIIFATEVQTINSFVRLESFKEVYGLIWGFLPIFSLVVGIVTGVLVLVWLEREISARIQQRIGPEYAGALGILQALADGIKLLFKENLRPSRGNTTLFSIGPSLAVISILLSYSVIPFSNHLVLADFNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCLLSISL 184
BLAST of CK939443 vs. ExPASy Swiss-Prot
Match: NU1C_NYMAL (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nymphaea alba GN=ndhA PE=3 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.734e-75 Identity = 144/178 (80.90%), Postives = 159/178 (89.33%), Query Frame = 3 Query: 42 EVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 575 E Q INSF R ES +EVYG++W+L PI VL ITIGVLVIVWLER+ISAGIQ+RIGPEYA PLGILQALADG KLLFKE+LLPSRG+ LFS+GPS+AV++ILLSY VIPF Y+LVL DL+IG+FLWIAISSIAPIGLLMSGYGSNNKYSF GGLRAAAQSISYEIPLT CVLSISL Sbjct: 5 EAQAINSFFRSESSKEVYGLIWLLVPILTLVLGITIGVLVIVWLERKISAGIQRRIGPEYAGPLGILQALADGVKLLFKEDLLPSRGDIRLFSVGPSVAVVSILLSYSVIPFGYHLVLTDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFSGGLRAAAQSISYEIPLTPCVLSISL 182 The following BLAST results are available for this feature:
BLAST of CK939443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939443 ID=CK939443; Name=CK939443; organism=Citrus sinensis; type=EST; length=840bpback to top |