CK939411

Overview
NameCK939411
Unique NameCK939411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939411 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.807e-42
Identity = 91/225 (40.44%), Postives = 136/225 (60.44%), Query Frame = 2
Query:  239 EEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAPEVLRKKGYDGSXXXLWSXXXILYVLLAGFLPFQDENIMNMY 898
            E+++H   V  G Y +G  LG GTF KV  GK  +TG  VA+K++N+ +++   ++ +I+REI  ++L RHP++++L +V++T   IF+ MEYV GGELF  + + GRL E  +R+ FQQ++S VD+CH   V HR                I+DFGLS     + +DG  L T CG+P Y APEV+  + Y G    +WS   ILY LL G LPF D+++  ++
Sbjct:    9 EKQKHDGRVRIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLF 229          
BLAST of CK939411 vs. ExPASy Swiss-Prot
Match: BRSK1_MOUSE (BR serine/threonine-protein kinase 1 OS=Mus musculus GN=Brsk1 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.789e-42
Identity = 85/223 (38.12%), Postives = 136/223 (60.99%), Query Frame = 2
Query:  233 HMEEERHVLF-GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSXXXLWSXXXILYVLLAGFLPFQDENIMNM 895
            H    +H  + G Y + + LGKG    V  G   +TG+ VA+K++N+++L +  +M+ ++REI++++L+ HP+V++L +V   KK +++ +E+V GGELF   V +GRL    ARK+F+Q++SA+DFCHS  + HR                I+DFG+++L      D LL T CG+P Y  PEV++ + YDG    +WS   IL+ LL G LPF D+N+  +
Sbjct:   21 HPHPPQHAQYVGPYRLEKTLGKGQTGLVKLGVHCITGQKVAVKIVNREKLSESVLMK-VEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIADFGMASLQV---GDSLLETSCGSPHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDDDNLRQL 239          
BLAST of CK939411 vs. ExPASy Swiss-Prot
Match: BRSK2_HUMAN (BR serine/threonine-protein kinase 2 OS=Homo sapiens GN=BRSK2 PE=1 SV=3)

HSP 1 Score: 169.859 bits (429), Expect = 1.820e-41
Identity = 85/212 (40.09%), Postives = 131/212 (61.79%), Query Frame = 2
Query:  263 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSXXXLWSXXXILYVLLAGFLPFQDENIMNM 895
            G Y + + LGKG    V  G   +T + VAIK++N+++L +  +M+ ++REI++++L+ HP+V++L +V   KK +++ +E+V GGELF   V +GRL    ARK+F+Q+ISA+DFCHS  + HR                I+DFG+++L      D LL T CG+P Y  PEV+R + YDG    +WS   IL+ LL G LPF D+N+  +
Sbjct:   17 GPYRLEKTLGKGQTGLVKLGVHCVTCQKVAIKIVNREKLSESVLMK-VEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDEKNNIRIADFGMASLQV---GDSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLVGALPFDDDNLRQL 224          
BLAST of CK939411 vs. ExPASy Swiss-Prot
Match: BRSK2_MOUSE (BR serine/threonine-protein kinase 2 OS=Mus musculus GN=Brsk2 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.377e-41
Identity = 85/212 (40.09%), Postives = 131/212 (61.79%), Query Frame = 2
Query:  263 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSXXXLWSXXXILYVLLAGFLPFQDENIMNM 895
            G Y + + LGKG    V  G   +T + VAIK++N+++L +  +M+ ++REI++++L+ HP+V++L +V   KK +++ +E+V GGELF   V +GRL    ARK+F+Q+ISA+DFCHS  + HR                I+DFG+++L      D LL T CG+P Y  PEV+R + YDG    +WS   IL+ LL G LPF D+N+  +
Sbjct:   18 GPYRLEKTLGKGQTGLVKLGIHCVTCQKVAIKIVNREKLSESVLMK-VEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDERNNIRIADFGMASLQV---GDSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLVGALPFDDDNLRQL 225          
BLAST of CK939411 vs. ExPASy Swiss-Prot
Match: MARK2_RAT (Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.054e-41
Identity = 89/233 (38.20%), Postives = 139/233 (59.66%), Query Frame = 2
Query:  212 SNFLRERHM----EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSXXXLWSXXXILYVLLAGFLPFQDENIMNM 895
            SN LR R+     +E+ H+  G Y + + +GKG FAKV   + ++TG+ VA+K+I+K QL     ++++ RE+ +M+++ HPN+V+L EV+ T+K +++ MEY  GGE+F   VA GR++E  AR  F+Q++SAV +CH + + HR                I+DFG S    +      L T CG+P Y APE+ + K YDG    +WS   ILY L++G LPF  +N+  +
Sbjct:   32 SNMLRGRNSATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 258          
BLAST of CK939411 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.915e-41
Identity = 88/233 (37.77%), Postives = 139/233 (59.66%), Query Frame = 2
Query:  212 SNFLRERHM----EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSXXXLWSXXXILYVLLAGFLPFQDENIMNM 895
            SN +R R+     +E+ H+  G Y + + +GKG FAKV   + ++TG+ VA+K+I+K QL     ++++ RE+ +M+++ HPN+V+L EV+ T+K +++ MEY  GGE+F   VA GR++E  AR  F+Q++SAV +CH + + HR                I+DFG S    +      L T CG+P Y APE+ + K YDG    +WS   ILY L++G LPF  +N+  +
Sbjct:   32 SNMIRGRNSATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 258          
BLAST of CK939411 vs. ExPASy Swiss-Prot
Match: Y7165_DICDI (Probable serine/threonine-protein kinase DDB_G0277165 OS=Dictyostelium discoideum GN=DDB_G0277165 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.012e-40
Identity = 91/213 (42.72%), Postives = 126/213 (59.15%), Query Frame = 2
Query:  263 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQL-KKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSXXXLWSXXXILYVLLAGFLPFQDENIMNM 895
            G + +G+ LG+GT  KV  G    TG  V IK+INK+ L  K  M  +I+REI +M+L+ HPN +++ EV  T K +F+ +EYV+GGELF   V +G L    A  +FQQ+I  +++CHSR + HR                I+DFG+ ++   +R D LLHT CG+P Y +PEV+    YDG    +WS   ILY LL G LPF DENI  +
Sbjct:    7 GPFIIGKTLGQGTTGKVKLGFHKDTGFKVGIKIINKELLINKPSMRRKIEREIVLMKLIDHPNAMKMYEVYETSKYLFLILEYVEGGELFDYLVEKGGLESGEALFFFQQIIIGLEYCHSRNICHRDLKPENLLLSGDKRIKIADFGMGSI---VRKDMLLHTSCGSPHYASPEVVSGIDYDGQKADVWSCGVILYALLTGKLPFDDENIRRL 216          
BLAST of CK939411 vs. ExPASy Swiss-Prot
Match: AMPKA_DICDI (5'-AMP-activated serine/threonine-protein kinase catalytic subunit alpha OS=Dictyostelium discoideum GN=snfA PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.012e-40
Identity = 91/221 (41.18%), Postives = 129/221 (58.37%), Query Frame = 2
Query:  242 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSXXXLWSXXXILYVLLAGFLPFQDENIMNMY 898
            E+   + G Y + + LG G+F KV   + + TG  VAIK++N+ ++K   M E+I+REI  M+L RHP++++L EV+ T   IF+ MEYV GGELF  + + G+L ED +R+ FQQ+IS VD+CH   V HR                 I+DFGLS     +++   L T CG+P Y APEV+  K Y G    +WS   ILY  L   LPF DE+I  ++
Sbjct:   22 EKSSQIIGNYRLDKTLGIGSFGKVKLAEHIRTGVKVAIKILNRTKIKNLKMDEKIRREIQNMKLFRHPHIIKLYEVIETTTDIFMVMEYVTGGELFEYIVKNGKLLEDESRRLFQQMISGVDYCHHHMVVHRDLKPENLLLDPINKCIKIADFGLS---NMMQDGDFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYAFLCAKLPFDDESIPMLF 239          
BLAST of CK939411 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.432e-40
Identity = 85/220 (38.64%), Postives = 132/220 (60.00%), Query Frame = 2
Query:  239 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSXXXLWSXXXILYVLLAGFLPFQDENIMNM 895
            +E+ H+  G Y + + +GKG FAKV   + ++TG  VAIK+I+K QL     ++++ RE+ +M+++ HPN+V+L EV+ T+K +++ MEY  GGE+F   VA GR++E  AR  F+Q++SAV +CH + + HR                I+DFG S    +      L T CG+P Y APE+ + K YDG    +WS   ILY L++G LPF  +N+  +
Sbjct:   48 DEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPT-SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKITDFGFS---NEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 261          
BLAST of CK939411 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 3.432e-40
Identity = 85/220 (38.64%), Postives = 132/220 (60.00%), Query Frame = 2
Query:  239 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSXXXLWSXXXILYVLLAGFLPFQDENIMNM 895
            +E+ H+  G Y + + +GKG FAKV   + ++TG  VAIK+I+K QL     ++++ RE+ +M+++ HPN+V+L EV+ T+K +++ MEY  GGE+F   VA GR++E  AR  F+Q++SAV +CH + + HR                I+DFG S    +      L T CG+P Y APE+ + K YDG    +WS   ILY L++G LPF  +N+  +
Sbjct:   48 DEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPT-SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 261          
The following BLAST results are available for this feature:
BLAST of CK939411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AAPK1_PONAB2.807e-4240.445'-AMP-activated protein kinase catalytic subunit ... [more]
BRSK1_MOUSE4.789e-4238.12BR serine/threonine-protein kinase 1 OS=Mus muscul... [more]
BRSK2_HUMAN1.820e-4140.09BR serine/threonine-protein kinase 2 OS=Homo sapie... [more]
BRSK2_MOUSE2.377e-4140.09BR serine/threonine-protein kinase 2 OS=Mus muscul... [more]
MARK2_RAT4.054e-4138.20Serine/threonine-protein kinase MARK2 OS=Rattus no... [more]
MARK2_HUMAN6.915e-4137.77Serine/threonine-protein kinase MARK2 OS=Homo sapi... [more]
Y7165_DICDI2.012e-4042.72Probable serine/threonine-protein kinase DDB_G0277... [more]
AMPKA_DICDI2.012e-4041.185'-AMP-activated serine/threonine-protein kinase c... [more]
MARK3_RAT3.432e-4038.64MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]
MARK3_MOUSE3.432e-4038.64MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004750_H02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939411 ID=CK939411; Name=CK939411; organism=Citrus sinensis; type=EST; length=898bp
GGGGAAACACAAACCAGACACAAAACCAAGTGCCCAAAAATCAACACCCC
ATTGAAAAGGAAGAGAAAAGCTTTGATCAAACACCCACTTCATGGAATCA
ATTCAAATCTGCATAACCGCAGTCCTTTCTTGGATCCCCTTATCGCAGTA
TTATTATCATAATTGATAATTCATAGGGATACAATTATAGTCCTGATTCA
AAAGACAAAATTCTAATTTCTTGAGAGAGAGACACATGGAAGAGGAGAGG
CATGTTCTTTTCGGAAAGTACGAGATGGGGAGGTTATTAGGCAAGGGCAC
GTTCGCGAAAGTGTATTACGGGAAGCAGCTGATGACAGGGGAGAGCGTGG
CGATCAAAGTGATCAACAAGGATCAATTGAAGAAGGAATTCATGATGGAG
CAGATCAAGCGAGAAATCTCTGTCATGAGATTAGTCCGCCACCCGAATGT
CGTCGAGTTGAGAGAAGTTATGGCCACCAAGAAGAAGATCTTTGTTGCCA
TGGAGTACGTCAAAGGTGGCGAGCTCTTCGCCAAAGTCGCCAGAGGCAGG
CTAAGGGAGGATCTCGCGAGGAAGTATTTCCAACAACTCATCAGTGCCGT
CGATTTCTGCCACAGCAGGGGAGTCTCTCACCGTGACCTGAAGCCGGAGA
ATCTGTTGTTGGACGAGAATGAGGATCTAAAGATCTCTGACTTTGGCCTC
TCTGCTCTCCCCGAGCAGCTGCGAAACGACGGCCTTCTGCACACCCAGTG
TGGGACTCCTGCTTACGTGGCGCCGGAGGTCCTGAGGAAGAAAGGCTACG
ACGGCTCAAANNNTNATTTATGGTCCTGNNNNNTCATCCTGTACGTGTTG
CTCGCCGGGTTCTTGCCGTTTCAGGACGAGAATATCATGAACATGTAT
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