CK939408

Overview
NameCK939408
Unique NameCK939408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939408 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.237e-50
Identity = 104/171 (60.82%), Postives = 122/171 (71.35%), Query Frame = 1
Query:  175 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSGE 684
            +IT+KV+FD+E   KP GRIV+GL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I SFM+Q            +SIYGEKF DENFKL+HT  GLLSMANAG DTNGSQFFITTV T WLDGRHVVFG+VL G +VV ++E   +  G  P   V +  SG+
Sbjct:   33 KITSKVFFDIEHGDKPLGRIVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKIVKSGQ 196          
BLAST of CK939408 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.615e-50
Identity = 102/179 (56.98%), Postives = 124/179 (69.27%), Query Frame = 1
Query:  148 AKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 684
            AKK+  N      +VY D++I  KPAGRI M L    VP TAENFR LCT EKG G       +KGS+FHRIIP FM Q            +SIYG+KF DENF LKHTGPGLLSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V  G+DV+ ++EA+G ++G PK KV++AD GE
Sbjct:  133 AKKARSN-----PQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIIADCGE 299          
BLAST of CK939408 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.615e-50
Identity = 98/177 (55.37%), Postives = 126/177 (71.19%), Query Frame = 1
Query:  154 KSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQN-GTPKSKVVVADSG 681
            +S+ N  ++T+KV+FD+E+ GKP  RI++GLFGK VPKT ENF+ L  G +   K G+   YKGSTFHR+I SFM+Q             SIYG++FPDENFKL+H G G LSMANAGPDTNGSQFFITTV TSWLDG+HVVFGKV+ GM++V ++E+E   +   P   + +A  G
Sbjct:   22 RSEANGPKVTDKVFFDIEVDGKPLARIIIGLFGKTVPKTVENFKQLSIGTQL--KDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKIASCG 196          
BLAST of CK939408 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.615e-50
Identity = 105/171 (61.40%), Postives = 120/171 (70.18%), Query Frame = 1
Query:  175 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA-EGRQNGTPKSKVVVADSGE 684
            ++TNKVYFDVEI G+ AGRIVMGLFG+ VPKT ENFRALCTGEK  G       YKGS+FHRII  FM+Q             SIYG KF DENF LKHTGPG+LSMANAGP+TNGSQFFI TV TSWLD +HVVFG+V+ GM +V  +E+ E R    PK    +   GE
Sbjct:   92 KVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG-------YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGE 255          
BLAST of CK939408 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.109e-50
Identity = 107/191 (56.02%), Postives = 130/191 (68.06%), Query Frame = 1
Query:  115 IVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 684
            + LLA F  +Q  +++ +  EIT+KVYFD++   +  G+IVMGL+G  VPKT ENFRALCTGE G G       YKGS FHR+I +FM+Q            ESIYG KFPDENF+LKHT P  LSMANAG DTNGSQFFITTV TSWLDG+HVVFG+VL G D+V  +E A       PK  + +AD+GE
Sbjct:   12 VALLAFF--VQPAQAEPDA-EITHKVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITIADAGE 192          
BLAST of CK939408 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.755e-50
Identity = 102/179 (56.98%), Postives = 123/179 (68.72%), Query Frame = 1
Query:  148 AKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 684
            AKK+  N      +VY D++I  KPAGRI M L    VP TAENFR LCT EKG G       +KGS+FHRIIP FM Q            +SIYG+KF DENF LKHTGPGLLSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V  G+DV+ ++EA G ++G PK KV++AD GE
Sbjct:  133 AKKARSN-----PQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEARGSKDGKPKQKVIIADCGE 299          
BLAST of CK939408 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.755e-50
Identity = 102/179 (56.98%), Postives = 124/179 (69.27%), Query Frame = 1
Query:  148 AKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 684
            AKK+  N      +VY D++I  KPAGRI M L    VP TAENFR LCT EKG G       +KGS+FHRIIP FM Q            +SIYG+KF DENF LKHTGPGLLSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V  G+DV+ ++EA+G ++G PK KV++AD GE
Sbjct:  133 AKKARSN-----PQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVMIADCGE 299          
BLAST of CK939408 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.755e-50
Identity = 105/166 (63.25%), Postives = 114/166 (68.67%), Query Frame = 1
Query:  187 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 684
            +VYFD+ I  KP GRIV  LF   VPKTAENFRALCTGEKG GKSGKPL Y+GS FHRII +FM+Q            ESIYGEKF DENF LKH  P LLSMANAGP TNGSQFFITTV T  LDG+HVVFGKVL G  VV  +E     +  P    V+A  GE
Sbjct:    5 RVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLETVSDRPVEDAVIAKCGE 170          
BLAST of CK939408 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.755e-50
Identity = 100/170 (58.82%), Postives = 118/170 (69.41%), Query Frame = 1
Query:  187 KVYFDVEIAGKPAGRIVMGL----FGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 684
            +VYFD++I  + AGRI + L    F   VPKTAENFRALCTGEKG+GK  KPL YKGS FHR+I  FM+Q            ESIYGEKFPDENF+LKH  P LLSMAN+GP TNGSQFFITTV T  LDG+HVVFG+V++G  +V K+E    Q   P + V + D GE
Sbjct:    9 RVYFDIQIGSQKAGRIALELVRLPFNDVVPKTAENFRALCTGEKGVGKQRKPLSYKGSIFHRVIKQFMIQGGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSIVRKIENMPTQADKPTTDVTIVDCGE 178          
BLAST of CK939408 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 2.755e-50
Identity = 101/171 (59.06%), Postives = 117/171 (68.42%), Query Frame = 1
Query:  175 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 684
            ++T KVYFD +I  +P GR+  GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV TSWLDG+HVVFGKVL GMDVV KVE  +      P   V++ D G+
Sbjct:   41 KVTVKVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVIIVDCGK 204          
The following BLAST results are available for this feature:
BLAST of CK939408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
PPIB_ASPFU1.237e-5060.82Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIE_HUMAN1.615e-5056.98Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
PPIB_SCHMA1.615e-5055.37Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
CP20C_ARATH1.615e-5061.40Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
PPIB_YARLI2.109e-5056.02Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIE_PONAB2.755e-5056.98Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
PPIE_MOUSE2.755e-5056.98Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPID_RHIOR2.755e-5063.25Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPID_ASPFU2.755e-5058.82Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIB_RAT2.755e-5059.06Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004751_A11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939408 ID=CK939408; Name=CK939408; organism=Citrus sinensis; type=EST; length=889bp
GGGGGTCCGCAGTCTGCACTAAGCGGAACCCCAAAGTGAGTGACTGCGAA
ACGAGAAACAACGAAGTGATACATGGCTTCGACAAAATTTCTTCCACTCA
CGATGCTATGGGCTATTGTCCTGTTGGCCACTTTCTCTTCAATTCAGGCG
AAGAAATCGGATCAGAATTTGAAAGAAATCACAAACAAAGTTTACTTTGA
CGTTGAGATTGCTGGAAAACCTGCCGGACGTATTGTAATGGGTCTCTTTG
GAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGAGCTTTGTGCACAGGG
GAGAAAGGGATTGGCAAGAGCGGGAAGCCACTCCACTACAAGGGAAGTAC
GTTCCATAGGATTATTCCCAGCTTTATGCTTCAAGGAGGTGATTTCACTC
TTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGAGAGAAGTTCCCTGAC
GAAAATTTCAAACTGAAGCACACTGGCCCAGGGCTTTTGTCAATGGCAAA
TGCTGGTCCAGACACCAATGGTTCACAATTCTTCATTACAACTGTGACAA
CTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGAAAGGTGCTATCGGGG
ATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGAGGCAGAATGGCACTCC
GAAGAGCAAAGTCGTCGTTGCAGACAGCGGTGAACTTCCTCTGTGATTTC
CCCCATAATTATATAATTACGCTATACACCTTTTTAGTCCTCTCGTCTTT
TCAACCTTCATGAAGATACTCATAATTTGCCTATTTATCATGTAATAGAC
ATTTTAAAATGTCCTAGGTTGTTTGCCAAGCTGGTGCTTCATTTTAAGGG
GATCCTTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA
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