CK939405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939405 vs. ExPASy Swiss-Prot
Match: ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.957e-40 Identity = 75/137 (54.74%), Postives = 103/137 (75.18%), Query Frame = 2 Query: 149 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLGELRNRAN 559 NA SGM V D K F EL+ K+ HR++I+KI+ G P +++ED AA+LP ++CRYA++DFD+V+SE +S+IFF+AWSP T+R+R+KM+YA+SKDRF+RELDGI E+QATDPTEMDL ++RAN Sbjct: 3 NAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFKSRAN 139
BLAST of CK939405 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.657e-39 Identity = 74/129 (57.36%), Postives = 95/129 (73.64%), Query Frame = 2 Query: 170 VADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLGELRNRA 556 + D K +F E++ KKVHRYV++K++ G ESY+D AA+LPE+DCRYAV+DFDYVT +NC+ SKIFFI WSP SRIR KM+YATSK RR LDG+HYE+QATDPTEM ++++RA Sbjct: 1 MTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDRA 129
BLAST of CK939405 vs. ExPASy Swiss-Prot
Match: ADF12_ARATH (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.657e-39 Identity = 79/136 (58.09%), Postives = 100/136 (73.53%), Query Frame = 2 Query: 149 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLGELRNRA 556 NA SGM V D K F EL+ K+ +R++IF+ID G P E+Y+DF LP N+CRYAVYDFD+ T+EN QKSKIFFIAWSP +SR+R KM+YA+SKDRF+RELDGI E+QATDP+EM L +++RA Sbjct: 3 NAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKL--GSPQENYDDFTNYLPPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSLDIIKSRA 136
BLAST of CK939405 vs. ExPASy Swiss-Prot
Match: ADF1_MAIZE (Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.820e-39 Identity = 75/137 (54.74%), Postives = 97/137 (70.80%), Query Frame = 2 Query: 149 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLGELRNRAN 559 N++SG+ V D K F EL+ ++ R+++F+ID G P + Y DF +LP N+CRYA+YD D+ T ENCQKSKIFF +WSP T+R R+KMLYA+SKDRFRRELDGI EIQATDP+EM L +R+R N Sbjct: 3 NSSSGLAVNDECKVKFRELKSRRTFRFIVFRIDDTDMEIKVDRLGEPNQGYGDFTDSLPANECRYAIYDLDFTTIENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVRSRTN 139
BLAST of CK939405 vs. ExPASy Swiss-Prot
Match: ADF2_MAIZE (Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.960e-38 Identity = 72/137 (52.55%), Postives = 98/137 (71.53%), Query Frame = 2 Query: 149 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLGELRNRAN 559 N++SG+ V+D K F +L+ ++ R+++F+ID G P + Y DF +LP ++CRYA+YD D+ T ENCQKSKIFF +WSP T+R R+KMLYA+SKDRFRRELDGI EIQATDP+EM L +++R N Sbjct: 3 NSSSGLAVSDECKVKFRDLKARRSFRFIVFRIDDKDMEIKVDRLGEPNQGYGDFTDSLPADECRYAIYDLDFTTVENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVKSRTN 139
BLAST of CK939405 vs. ExPASy Swiss-Prot
Match: ADF8_ORYSJ (Putative actin-depolymerizing factor 8 OS=Oryza sativa subsp. japonica GN=ADF8 PE=3 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.551e-37 Identity = 78/130 (60.00%), Postives = 96/130 (73.85%), Query Frame = 2 Query: 170 VADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLGELRNRAN 559 V + SK+AF EL R+KVHRYVIFKID TG P ESY+DF A+LP + AVYD D+V+ +NC+KSKIFFI+WSPS S IRAK +YA +++FR ELDG+H+EIQATDP +MDL LR RAN Sbjct: 19 VPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLPAD----AVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 144
BLAST of CK939405 vs. ExPASy Swiss-Prot
Match: ADF_BRANA (Actin-depolymerizing factor (Fragment) OS=Brassica napus PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.924e-36 Identity = 72/127 (56.69%), Postives = 97/127 (76.38%), Query Frame = 2 Query: 176 DHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLGELRNRA 556 D+ K F EL +K++ R++IF+ID G P E+Y+DF A+LP ++CRYAV+DFD+ T+ENCQKSKIFFIAWSP +SR+R KM+YA+SKDRF+RELDGI E+QATDP+EM +++RA Sbjct: 2 DNCKLKFLEL-KKRIFRFIIFRIDGQQVVVEKL--GNPQETYDDFTASLPADECRYAVFDFDFTTNENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 125
BLAST of CK939405 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.475e-35 Identity = 68/136 (50.00%), Postives = 98/136 (72.06%), Query Frame = 2 Query: 149 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLGELRNRA 556 NA SG+ V D F ELQ K++HR++ FK+D G A SY+DF +LPENDCRYA+YDFD+VT+E+ QKS+IF+I WSPS++++++KMLYA+S +F+ L+GI E+QATD +E+ L E+++RA Sbjct: 3 NARSGVAVNDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSLPENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIKDRA 138
BLAST of CK939405 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.774e-33 Identity = 63/135 (46.67%), Postives = 95/135 (70.37%), Query Frame = 2 Query: 149 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLGELRNR 553 N++SG+ + D K F ELQ K++HR++ F +D G SYEDF ++LPE DCR+A+YDFD++T+E+ KS+IF+I WSP +++R+KMLYA+S +RF++EL+GI E+QATD E+ L L++R Sbjct: 3 NSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDR 137
BLAST of CK939405 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.232e-27 Identity = 57/148 (38.51%), Postives = 91/148 (61.49%), Query Frame = 2 Query: 149 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSE-----------NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLGELRNRAN 559 NATSG+ V++ K F EL+ + HR+V+FKID G +++ A+LP + CRYAVYD D+ S+ +SKIFF++WSP+ + +R+KM+YA+S + F++ELDG+ ++QATDP+E+ L L++ + Sbjct: 3 NATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKDHTS 150 The following BLAST results are available for this feature:
BLAST of CK939405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939405 ID=CK939405; Name=CK939405; organism=Citrus sinensis; type=EST; length=884bpback to top |