CK939401

Overview
NameCK939401
Unique NameCK939401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.347e-22
Identity = 69/188 (36.70%), Postives = 95/188 (50.53%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETK-----DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            F  F  R+ K Y S  E   RF  F  NL+ I + N+   S +  +NKF+D S +E      G +      T+   K+     P  K     DWR    V+ VK+QG CG+CW F+T  SLE+ +     + I+LSEQQ++DC   F + GCNGGL   AFE I   GG+  E  YPY   +  C+ +
Sbjct:   28 FEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSKDETIAKYTGLS--LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDC--DFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMN 210          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.090e-21
Identity = 63/189 (33.33%), Postives = 98/189 (51.85%), Query Frame = 2
Query:  272 HALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLN-KFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFG---KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            + + F  +     K + +VE ++ R A F+ N  ++   NRK  +++L ++  FA  + EE+           S   KG  +      P+  DWR+ G V+P++DQG+CGSC+TF +  +LE       G   + + LSE+ +V C +   N GCNGGL S  + YI  N G+  E  YPYTG D  C+
Sbjct:   12 YGIDFNTWVANNNKHFTAVESLRRR-AIFNMNARIVAENNRKE-TFKLSVDGPFAAMTNEEYNSL---LKLKRSGEEKGEVRYLNIQAPKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMEN-GIAKESDYPYTGSDSTCR 194          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 2
Query:  533 PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            PE+ DWR+ G V+PVK+Q  CGSCW FST  ++E       GK ISLSEQ+L+DC +   + GC GG  + + +Y+  NGG+ TE+ YPY  K G C+
Sbjct:    2 PESIDWRDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDR--RSHGCKGGYQTGSIQYVADNGGVHTEKEYPYEKKQGKCR 97          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 69/188 (36.70%), Postives = 94/188 (50.00%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETK-----DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            F  F  R+ K Y S  E   RF  F  NL+ I   N+   S +  +NKF+D S +E      G +      T+   K+     P  K     DWR    V+ VK+QG CG+CW F+T  SLE+ +     + I+LSEQQ++DC   F + GCNGGL   AFE I   GG+  E  YPY   +  C+ +
Sbjct:   28 FEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQND-SAKYEINKFSDLSKDETIAKYTGLS--LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDC--DFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMN 210          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 66/186 (35.48%), Postives = 88/186 (47.31%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETK-----DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            F  F   Y K+Y    E + RF+ F + L+ I   NR   S    +NKFAD S  E      G   N    T    K      P  K     DWR+   V+ +K+Q  CG+CW F+T  S+E+ Y       I LSEQQ++DC   + + GC+GGL   AFE +   G L  E  YPY G +  C+
Sbjct:   31 FETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGL--NMPVQTTNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDC--DYVDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCE 212          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.429e-21
Identity = 66/186 (35.48%), Postives = 94/186 (50.54%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETK-----DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            F  F R+Y K Y+S  E   R+  F  NL+ I + NR   +    +NKF+D S +E      G +      T+   ++     P  K     DWR    ++ VK+QG CG+CW F+T  SLE+ +  A  + I+LSEQQ++DC     + GC GGL   AFE I   GG+  E  YPY   +  C+
Sbjct:   28 FEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRNDTAV-YKINKFSDLSKDETIAKYTGLS--LPLHTQNFCEVVVLDRPPGKGPLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCDSV--DVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNNYCR 208          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.172e-21
Identity = 67/187 (35.83%), Postives = 96/187 (51.34%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLN-KFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA---DVLPE---TKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI--KYNGGLDTEEAYPYTGKDG 817
            +  F +R+GK +    E   RF  F +N+      N +       ++ KFAD + +EF +  L    +  A    +HK      D  P    + DWR+ G V+PVK+QG CGSCW FS  G++E  +  +    +SLSEQ LV C     ++GCNGGL  QA  +I   +NG + TE +YPYT   G
Sbjct:   42 YGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNP--DYYARHLKDHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCDNI--DEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGG 224          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.982e-20
Identity = 64/188 (34.04%), Postives = 98/188 (52.13%), Query Frame = 2
Query:  275 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLN-KFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFG---KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            A+ F  +A +  K + ++E+++ R A F+ N   + S N+ G S++L ++  FA  + EE+   R       +    G  K      PE+ DWR+ G V+P++DQ  CGSC+TF +  +LE       G     + LSE+ +  C +   N GCNGGL S  ++YI    G+  E  YPYTG D  CK
Sbjct:    9 AIDFNTWASKNNKHFTAIEKLRRR-AIFNMNAKFVDSFNKIG-SFKLSVDGPFAAMTNEEY---RTLLKSKRTTEENGQVKYLNIQAPESVDWRKEGKVTPLRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHM-QCTRDNGNNGCNGGLGSNVYDYI-IEHGVAKESDYPYTGSDSTCK 189          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.333e-19
Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 2
Query:  533 PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            PE+ DWRE G V+PVK+Q  CGSCW FST  ++E       G+ ISLSEQ+L+DC   + + GC+GG  + + +Y+  N G+ TE  YPY  K G C+
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDC--EYRSHGCDGGYQTPSLQYVVDN-GVHTEREYPYEKKQGRCR 96          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.273e-19
Identity = 62/202 (30.69%), Postives = 100/202 (49.50%), Query Frame = 2
Query:  269 RHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTN----RKGLSYRLGLNKFADWSWEEFQ---------------RHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAY-HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 814
            ++A  F ++ +   K YE+++E   RF  F       +  N    + GL+Y   +N+++D+S EEF                ++ +   ++ + T   +    +   P+++D+R      P KDQG+CGSCW F+  G+ E  Y H      IS SEQQ+VDC+    N GC+GG P  AF Y+  N G+   + YPY G +
Sbjct:  157 KYASKFFKYMKENNKKYENMDEQLQRFENFKIRYMKTQKHNEMVGKNGLTYVQKVNQYSDFSKEEFDNYFKKLLSVPMDLKSKYIVPLKKHLANTNLISVDNKSKDFPDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCST--ENYGCDGGNPFYAFLYM-INNGVCLGDEYPYKGHE 355          
The following BLAST results are available for this feature:
BLAST of CK939401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CATV_NPVAC8.347e-2236.70Viral cathepsin OS=Autographa californica nuclear ... [more]
CPP1_ENTHI1.090e-2133.33Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
MEX2_JACME1.859e-2147.96Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATV_NPVRO1.859e-2136.70Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVBS1.859e-2135.48Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATV_NPVEP2.429e-2135.48Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CYSP1_LEIPI3.172e-2135.83Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
ACP2_ENTHI5.982e-2034.04Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
MEX1_JACME1.333e-1946.94Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CYSP_PLAVN2.273e-1930.69Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004751_B02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939401 ID=CK939401; Name=CK939401; organism=Citrus sinensis; type=EST; length=833bp
GGGGAATAATAACAATAATAATAGTGTTCATAGACTGCATTCATTTAATC
CGAAGCCCTTGAGTGCGGTGCACTCTCTCCAAACAAAACAGACACAATCA
TTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGA
TCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTC
CAGGTGATCGGCCAAGCCCGCCACGCTCTCTCCTTTGCCCGTTTTGCTCG
CAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCG
CGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAATCGTAAAGGC
CTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGAGCTGGGAAGA
GTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACTACAA
AAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGG
AGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATC
TTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCAGG
CCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTGTGCC
CAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAGCCTT
TGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATATCCCT
ACACCGGAAAAGATGGTGTCTGCAAATTCTCAT
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