CK939401

Overview
NameCK939401
Unique NameCK939401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.436e-15
Identity = 53/190 (27.89%), Postives = 91/190 (47.89%), Query Frame = 2
Query:  281 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV--------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            +F  + + + K Y + E+ +     F +++  ++S           +N  +D S +EF+   L +A+      K    L A+          P   D R+   V+P++ QG CGSCW FS   + E+AY     + + L+EQ+LVDCA   +  GC+G    +  EYI++NG +  E  Y Y  ++  C+
Sbjct:   25 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQSNGG-------AINHLSDLSLDEFKNRFLMSAE-AFEHLKTQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDCA---SQHGCHGDTIPRGIEYIQHNGVVQ-ESYYRYVAREQSCR 202          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14
Identity = 48/141 (34.04%), Postives = 74/141 (52.48%), Query Frame = 2
Query:  416 GLNKFADWSWEEFQRHRLGAAQNCSAT--TKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS-LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNG-GLDTEEAYPYTGKDGVCK 826
            G+N+F+    EEF+   LG+    +     +G   +    LP   DWR+  +V+PV++Q  CG CW FS   ++E+A     GK +  LS QQ++DC  +FNN GC GG P  A  ++      L  +  YP+   +G C+
Sbjct:   59 GVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRPIPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESA-RAIQGKSLDYLSVQQVIDC--SFNNSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCR 196          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14
Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = 2
Query:  530 LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI-SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI-KYNGGLDTEEAYPYTGKDGVCKF 829
            LP   DWR+  +V+ V++Q  CG CW FS  G++E+AY    GK +  LS QQ++DC  ++NN GCNGG    A  ++ K    L  +  YP+  ++G+C +
Sbjct:  108 LPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAY-AIKGKPLEDLSVQQVIDC--SYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHY 206          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.023e-11
Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  515 LTADV------LPETKDWRES---GIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS--LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            LTA++      LP + DWR       VSPV++Q  CGSC++F++ G LEA          +  LS Q++V C+Q    QGC GG P         + GL  E  +PYTG D  CK
Sbjct:  220 LTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASVGMLEARIRILTNNSQTPILSSQEVVSCSQ--YAQGCEGGFPYLTAGKYAQDFGLVEEACFPYTGTDSPCK 332          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.278e-11
Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  515 LTADV------LPETKDWRES---GIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS--LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            LTA++      LP + DWR       VSPV++Q  CGSC++F++ G LEA          +  LS Q++V C+Q    QGC GG P         + GL  E  +PYTG D  CK
Sbjct:  220 LTAEIQQKVLHLPTSWDWRNIHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTSNSQTPILSPQEVVSCSQ--YAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCK 332          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.278e-11
Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  515 LTADV------LPETKDWRES---GIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS--LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            LTA++      LP + DWR       VSPV++Q  CGSC++F++ G LEA          +  LS Q++V C+Q    QGC GG P         + GL  E  +PYTG D  CK
Sbjct:  220 LTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ--YAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCK 332          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11
Identity = 39/104 (37.50%), Postives = 56/104 (53.85%), Query Frame = 2
Query:  530 LPETKDWRES---GIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS--LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            LP + DWR       V+PV++QG CGSC++F++ G +EA          +  LS Q++V C+Q    QGC GG P         + GL  E+ +PYTG D  C+
Sbjct:  231 LPTSWDWRNVHGINFVTPVRNQGSCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQ--YAQGCEGGFPYLIAGKYAQDFGLVEEDCFPYTGTDSPCR 332          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.076e-11
Identity = 59/175 (33.71%), Postives = 81/175 (46.29%), Query Frame = 2
Query:  317 YESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRE-SGI--VSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS--LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            Y+  E+M LR        DLIR   R G S R+   K A  + +E Q+  L                    LPE+ DWR   G+  VSPV++Q  CGSC++F++ G LEA          +  LS Q++V C+     QGC+GG P         + G+  E  +PYT KD  CK
Sbjct:  190 YKEYEKMSLR--------DLIR---RSGHSQRIPRPKPAPMT-DEIQQQILN-------------------LPESWDWRNVQGVNYVSPVRNQESCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSP--YAQGCDGGFPYLIAGKYAQDFGVVEESCFPYTAKDSPCK 331          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.076e-11
Identity = 43/115 (37.39%), Postives = 58/115 (50.43%), Query Frame = 2
Query:  515 LTADV------LPETKDWRE---SGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS--LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            LTA++      LP + DWR    +  VSPV++Q  CGSC+ F++T  LEA          +  LS Q++V C+Q    QGC GG P         + GL  E  +PY G D  CK
Sbjct:  193 LTAEIHEEISRLPTSWDWRNVRGTNFVSPVRNQASCGSCYAFASTAMLEARIRILTNNTQTPILSPQEIVSCSQ--YAQGCEGGFPYLIAGKYAQDFGLVEEACFPYAGSDSPCK 305          
The following BLAST results are available for this feature:
BLAST of CK939401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
PEPT1_DERPT4.436e-1527.89Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CATO_MOUSE8.366e-1434.04Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
CATO_HUMAN8.366e-1439.22Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
CATC_MACFA1.023e-1138.26Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]
CATC_PONAB2.278e-1138.26Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CATC_HUMAN2.278e-1138.26Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CATC_BOVIN3.886e-1137.50Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
CATC_MOUSE5.076e-1133.71Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
CATC_CANFA5.076e-1137.39Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004751_B02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939401 ID=CK939401; Name=CK939401; organism=Citrus sinensis; type=EST; length=833bp
GGGGAATAATAACAATAATAATAGTGTTCATAGACTGCATTCATTTAATC
CGAAGCCCTTGAGTGCGGTGCACTCTCTCCAAACAAAACAGACACAATCA
TTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGA
TCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTC
CAGGTGATCGGCCAAGCCCGCCACGCTCTCTCCTTTGCCCGTTTTGCTCG
CAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCG
CGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAATCGTAAAGGC
CTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGAGCTGGGAAGA
GTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACTACAA
AAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGG
AGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATC
TTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCAGG
CCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTGTGCC
CAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAGCCTT
TGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATATCCCT
ACACCGGAAAAGATGGTGTCTGCAAATTCTCAT
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