CK939401

Overview
NameCK939401
Unique NameCK939401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.559e-36
Identity = 82/199 (41.21%), Postives = 114/199 (57.29%), Query Frame = 2
Query:  281 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHK--------LTADVLPETK--DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            S+  F  ++G+ Y  +EE + R   F  NL  I   N+K     ++Y L +N+F+D + E+F           +A  KG  K         + D  PE+   DWR  G V+PVKDQG CGSCW FSTTG +E  +    G+ +SLSEQQLVDCA  ++ NQGCNGG   +A  Y++ NGG+DTE +YPY  +D  C+F+
Sbjct:   19 SWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKF-----------NAVMKGYKKGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTCRFN 206          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.559e-36
Identity = 85/198 (42.93%), Postives = 113/198 (57.07%), Query Frame = 2
Query:  251 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGA----AQNCSATTKGNHKLTAD--VLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            Q I  A   L F  +  ++GK+Y+SV E + R   F  NL  I + N + LSYRLGLN+FAD S  E+     GA     +N    T  N   T+D  VLP++ DWR  G V+ VKDQG C SCW FST G++E       G+ ++LSEQ L++C +   N GC GG    A+E+I  NGGL T+  YPY   +GVC+
Sbjct:   45 QGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNK--ENNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCE 240          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.954e-36
Identity = 83/198 (41.92%), Postives = 113/198 (57.07%), Query Frame = 2
Query:  248 LQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGA-----AQNCSATTKGNHKLTAD-VLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            L  +  A  +L F  +  ++GK+Y SV E + R   F  NL  I + N + LSYRLGL  FAD S  E++    GA       +   T+   +K +AD VLP++ DWR  G V+ VKDQGHC SCW FST G++E       G+ ++LSEQ L++C +   N GC GG    A+E+I  NGGL T+  YPY   +GVC
Sbjct:   37 LHSVFDAEASLIFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNK--ENNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVC 232          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.016e-35
Identity = 80/189 (42.33%), Postives = 107/189 (56.61%), Query Frame = 2
Query:  302 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV--------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            ++ K Y +  E + R   F++N   I   N+      +SY+LGLNK+AD    EF+    G         +    L            +P++ DWRE G V+ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N GCNGGL   AF YIK NGG+DTE++YPY G D  C F+
Sbjct:   34 QHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFN 222          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.326e-35
Identity = 87/201 (43.28%), Postives = 114/201 (56.72%), Query Frame = 2
Query:  254 VIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK-DGVCKF 829
            V    ++  SF  + R   K Y   E M  R+  F KN+D + + N KG    LGLN+ AD S EE++ + LG   +      G HK    +         P   DWRE   V+PVKDQG CGSC++FSTTGS+E       GK +SLSEQ ++DC+ +F N+GCNGGL + AFEYI  N GL++EE YPY  K +  CKF
Sbjct:   24 VFSHKQYQDSFIDWMRSNNKAYTHKEFMP-RYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLN--GYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKF 221          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.263e-35
Identity = 83/196 (42.35%), Postives = 112/196 (57.14%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK----GNHK---LTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFN-------NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 829
            F  F +R+GK Y+  +E   R + F  NL   R       S   G+ KF+D +  EF+R  LG  ++  A  +      H+   L  D LP+  DWR+ G V PVK+QG CGSCW+FS +G+LE A++ A GK   LSEQQ VDC    +       + GCNGGL + AF Y++  GGL++E+ YPYTG DG CKF
Sbjct:   48 FLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKF 243          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.955e-35
Identity = 82/187 (43.85%), Postives = 109/187 (58.29%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKG----LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA---DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            +A +   +GK Y +V E + R+A F  NL  I   N        S+RLGLN+FAD + EE++   LG         K + +  A   + LPE+ DWR  G V+ +KDQG CGSCW FS   ++E       G  ISLSEQ+LVDC  ++ N+GCNGGL   AF++I  NGG+DTE+ YPY GKD  C
Sbjct:   40 YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSY-NEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERC 225          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.955e-35
Identity = 80/197 (40.61%), Postives = 114/197 (57.87%), Query Frame = 2
Query:  251 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKG-NHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG--ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            Q + + ++  +F  +   + + Y S EE   RF  F  N+D I   N KG    LGLN FAD + EE++   LG   + S+     + K+   V   + DWR  G V+P+K+QG CG CW+FS TG+ E A + A G     S+SEQQL+DC+ ++ N GC GGL + AFEYI  NGG+DTE +YP+T     CK++
Sbjct:   19 QQLSELQYRNAFTNWMIAHQRHYSS-EEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDASSLEMTPSEKVFGGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGCEGGLMTLAFEYIINNGGIDTESSYPFTANTEKCKYN 214          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.859e-35
Identity = 82/186 (44.09%), Postives = 109/186 (58.60%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQ-----NCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            F  +   + K Y+SVEE   RF  F +NL  I   N +  SY LGLN+FAD + EEF+   LG A+         +    ++   D LP++ DWR+ G V+PVKDQG CGSCW FST  ++E       G   SLSEQ+L+DC   FN+ GCNGGL   AF+YI   GGL  E+ YPY  ++G+C+
Sbjct:   51 FESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDITD-LPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNS-GCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQ 234          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.859e-35
Identity = 80/176 (45.45%), Postives = 109/176 (61.93%), Query Frame = 2
Query:  326 VEEMKLRFATFSKNLDLI--RSTNRKGLSYRLGLNKFADWSWEEFQRHRLGA----AQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            + +   RF  F  NL  I   + + K  +Y+LGL KF D + +E+++  LGA    A+  +     N K +A V    +PET DWR+ G V+P+KDQG CGSCW FSTT ++E       G+ ISLSEQ+LVDC +++ NQGCNGGL   AF++I  NGGL+TE+ YPY G  G C
Sbjct:   67 INDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSY-NQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKC 241          
The following BLAST results are available for this feature:
BLAST of CK939401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CYSP1_HOMAM4.559e-3641.21Digestive cysteine proteinase 1 OS=Homarus america... [more]
CPR4_ARATH4.559e-3642.93Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPR3_ARATH5.954e-3641.92Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CATL_SARPE1.016e-3542.33Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CYSP3_DICDI1.326e-3543.28Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CYSP1_MAIZE2.263e-3542.35Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
ORYA_ORYSJ2.955e-3543.85Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSP6_DICDI2.955e-3540.61Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
XCP1_ARATH3.859e-3544.09Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
GCP1_ARATH3.859e-3545.45Germination-specific cysteine protease 1 OS=Arabid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004751_B02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939401 ID=CK939401; Name=CK939401; organism=Citrus sinensis; type=EST; length=833bp
GGGGAATAATAACAATAATAATAGTGTTCATAGACTGCATTCATTTAATC
CGAAGCCCTTGAGTGCGGTGCACTCTCTCCAAACAAAACAGACACAATCA
TTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGA
TCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTC
CAGGTGATCGGCCAAGCCCGCCACGCTCTCTCCTTTGCCCGTTTTGCTCG
CAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCG
CGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAATCGTAAAGGC
CTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGAGCTGGGAAGA
GTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACTACAA
AAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGG
AGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATC
TTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCAGG
CCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTGTGCC
CAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAGCCTT
TGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATATCCCT
ACACCGGAAAAGATGGTGTCTGCAAATTCTCAT
back to top