CK939401

Overview
NameCK939401
Unique NameCK939401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.040e-35
Identity = 82/197 (41.62%), Postives = 117/197 (59.39%), Query Frame = 2
Query:  263 QARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYR-LGLNKFADWSWEEFQRHRLGAAQNCSATT--KGNHKLTADVL---PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFS 832
            ++++  +F  +  ++ + Y S  E   R++ F  N+D + + N KG S   LGLN FAD + EE+++  LG   N  +     G   L  + L   P++ DWR    V+P+KDQG CGSCW+FSTTGS E A+     K +SLSEQ LVDC+    N GC+GGL + AF+YI  N G+DTE +YPYT + G  C F+
Sbjct:   29 ESQYRTAFTEWTLKFNRQYSS-SEFSNRYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCSGPEENFGCDGGLMNNAFDYIIKNKGIDTESSYPYTAETGSTCLFN 224          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.915e-34
Identity = 74/187 (39.57%), Postives = 104/187 (55.61%), Query Frame = 2
Query:  281 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 829
            S+  F  +YG+ Y   +E   R   F +N  LI   N+K     +++++ +N+F D + EEF     G  +      K      A  +    DWR   +V+PVKDQ  CGSCW FS TG+LE  +     + +SLSEQQLVDC+  + N GC GG  + AF+YIK NGG+DTE +YPY  +D  C+F
Sbjct:   19 SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRF 205          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.915e-34
Identity = 76/177 (42.94%), Postives = 100/177 (56.50%), Query Frame = 2
Query:  302 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            +YGK Y S+ E + RF  F + L  I   N     SY++GLN+FAD + EEF+   LG     + T   N        VLP   DWR +G V  +K QG CG CW FS   ++E       G  ISLSEQ+L+DC +  N +GCNGG  +  F++I  NGG++TEE YPYT +DG C
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGEC 224          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.502e-34
Identity = 76/174 (43.68%), Postives = 106/174 (60.92%), Query Frame = 2
Query:  305 YGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 814
            +G++Y   EE   R A + KN+ +I   N++       + + +N F D + EEF++   G         K  H+     +P++ DWRE G V+ VK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++   NQGCNGGL   AF+Y+K NGGLDTEE+YPY G++
Sbjct:   36 HGRLYGMNEE-GWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRE 208          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 4.267e-34
Identity = 77/193 (39.90%), Postives = 107/193 (55.44%), Query Frame = 2
Query:  293 FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            F   + K Y+   E + R   F++N   I   N++     +S++L +NK+AD    EF++   G         +   +    V         LP++ DWR  G V+ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N GCNGGL   AF YIK NGG+DTE++YPY   D  C F+
Sbjct:   62 FKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFN 254          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 4.267e-34
Identity = 79/177 (44.63%), Postives = 108/177 (61.02%), Query Frame = 2
Query:  311 KIYESVEEMKLRFATFSKNLDLIRSTNRKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 829
            ++Y + EE + R A + KN+ +I+  N +  +    + + +N F D + EEF++   G         +   +     +P++ DWRE G V+PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A  NQGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+
Sbjct:   38 RLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY 213          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.267e-34
Identity = 78/180 (43.33%), Postives = 105/180 (58.33%), Query Frame = 2
Query:  287 ARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 814
            A   R YG     + E   R A + KN+ +I   NR+       + + +N F D + EEF++   G         K   +     +P++ DWRE G V+PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  N+GCNGGL   AF Y+K NGGLD+EE+YPY G+D
Sbjct:   34 ATHRRLYG-----MNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPLFAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRD 208          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 5.573e-34
Identity = 80/177 (45.20%), Postives = 107/177 (60.45%), Query Frame = 2
Query:  311 KIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLG----LNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 829
            ++Y + EE + R A + KN+ +I+  N +  + + G    +N F D + EEF++   G         +   +     +P+T DWRE G V+PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+    NQGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+
Sbjct:   38 RLYGTNEE-EWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY 213          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.278e-34
Identity = 79/192 (41.15%), Postives = 106/192 (55.21%), Query Frame = 2
Query:  293 FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEF---------QRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 829
            F  ++GK Y + EE   R + F   L  I+  N +     ++Y L +N F+D + EE          +RH L      + TT     + ADV     DWR  G V+PVKDQG CGSCW FS   +LE A+    G  +SLSEQ LVDC+ ++ NQGCNGG P QA++YI  N G+DTE +YPY   D  C++
Sbjct:   23 FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSAPTTP----MAADV-----DWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNCRY 205          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.506e-34
Identity = 79/185 (42.70%), Postives = 104/185 (56.22%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            F  +  +Y K Y S +E   RF  F     +I + N K  SY+LG+N +AD S +EF  + L   +    +  G   +  D     +P T DWR    V+PVKDQG CGSCWTF +TGSLE       G+ +SLSEQQLVDCA    +QGC GG  S AF+Y+   G L TE  YPY  ++G+C+
Sbjct:  225 FKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEF--NTLVKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYLMQNGLCR 407          
The following BLAST results are available for this feature:
BLAST of CK939401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CYSP2_DICDI5.040e-3541.62Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CYSP3_HOMAM1.915e-3439.57Digestive cysteine proteinase 3 OS=Homarus america... [more]
ACTN_ACTDE1.915e-3442.94Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CATL1_PIG2.502e-3443.68Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL_DROME4.267e-3439.90Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATL1_MOUSE4.267e-3444.63Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATL1_CANFA4.267e-3443.33Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATL1_RAT5.573e-3445.20Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CRUST_PANBO7.278e-3441.15Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CFAD_DICDI9.506e-3442.70Counting factor associated protein D OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004751_B02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939401 ID=CK939401; Name=CK939401; organism=Citrus sinensis; type=EST; length=833bp
GGGGAATAATAACAATAATAATAGTGTTCATAGACTGCATTCATTTAATC
CGAAGCCCTTGAGTGCGGTGCACTCTCTCCAAACAAAACAGACACAATCA
TTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGA
TCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTC
CAGGTGATCGGCCAAGCCCGCCACGCTCTCTCCTTTGCCCGTTTTGCTCG
CAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCG
CGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAATCGTAAAGGC
CTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGAGCTGGGAAGA
GTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACTACAA
AAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGG
AGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATC
TTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCAGG
CCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTGTGCC
CAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAGCCTT
TGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATATCCCT
ACACCGGAAAAGATGGTGTCTGCAAATTCTCAT
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