CK939401

Overview
NameCK939401
Unique NameCK939401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.621e-33
Identity = 75/169 (44.38%), Postives = 102/169 (60.36%), Query Frame = 2
Query:  332 EMKLRFATFSKNLDLIRSTNRKGLS---YRLGLNKFADWSWEEFQRHRLGA--AQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            E + RF  F  NL  + + N +      +RLG+N+FAD + EEF+   LGA  A+   A  +       + LPE+ DWRE G V+PVK+QG CGSCW FS   ++E+      G+ I+LSEQ+LV+C+    N GCNGGL   AF++I  NGG+DTE+ YPY   DG C
Sbjct:   70 EHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKC 238          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 143.28 bits (360), Expect = 1.621e-33
Identity = 75/177 (42.37%), Postives = 99/177 (55.93%), Query Frame = 2
Query:  302 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            +YGK Y S+ E + RF  F + L  I   N     SY++GLN+FAD + EEF+   L      + T   N        VLP   DWR +G V  +K QG CG CW FS   ++E       G  ISLSEQ+L+DC +  N +GCNGG  +  F++I  NGG++TEE YPYT +DG C
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGEC 224          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.718e-33
Identity = 80/189 (42.33%), Postives = 109/189 (57.67%), Query Frame = 2
Query:  275 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK--GNH--KLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI--KYNGGLDTEEAYPYTGKDG 817
            A  F  F R YG+ YE++ E + R A F +NL+L+R    +    + G+ KF D S  EF    L  A   +A  +    H  K  AD+  +P+  DWRE G V+PVKDQG CGSCW FS  G++E  ++ A  + +SLSEQQLV C     N GC+GGL  QAF+++    NG L TE++YPY   +G
Sbjct:   35 AALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDM--NDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNG 221          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.718e-33
Identity = 80/189 (42.33%), Postives = 109/189 (57.67%), Query Frame = 2
Query:  275 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK--GNH--KLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI--KYNGGLDTEEAYPYTGKDG 817
            A  F  F R YG+ YE++ E + R A F +NL+L+R    +    + G+ KF D S  EF    L  A   +A  +    H  K  AD+  +P+  DWRE G V+PVKDQG CGSCW FS  G++E  ++ A  + +SLSEQQLV C     N GC+GGL  QAF+++    NG L TE++YPY   +G
Sbjct:   35 AALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDM--NDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNG 221          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.718e-33
Identity = 76/187 (40.64%), Postives = 110/187 (58.82%), Query Frame = 2
Query:  290 RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKG----LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTAD--VLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            ++ R Y K Y   ++   R   + KN+  I+  N +     ++Y LGLN+F D ++EEF+   L      S          A+   +P+  DWRESG V+ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N GC+GGL   A++Y+K   GL+TE +YPYT  +G C+++
Sbjct:   23 QWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYN 207          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.718e-33
Identity = 79/180 (43.89%), Postives = 110/180 (61.11%), Query Frame = 2
Query:  311 KIYESVEEMKLRFATFSKNLDLIRSTNRKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN---HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 829
            ++Y + EE   R A + KN+ +I   N +       + + +N F D + EEF R  +G  +N     KG      L  D LP++ DWR+ G V+PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ LVDC++   NQGCNGG  ++AF+Y+K NGGLD+EE+YPY   D +CK+
Sbjct:   38 RLYGANEE-GWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEF-RQMMGCFRN-QKFRKGKVFREPLFLD-LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKY 213          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 4.718e-33
Identity = 78/180 (43.33%), Postives = 105/180 (58.33%), Query Frame = 2
Query:  287 ARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 814
            A   R YG     + E + R A + KN  +I   N++       +R+ +N F D + EEF++   G         K  H+     +P++ DW + G V+PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  NQGCNGGL   AF+YIK NGGLD+EE+YPY   D
Sbjct:   34 ATHRRLYG-----MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATD 208          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 75/182 (41.21%), Postives = 102/182 (56.04%), Query Frame = 2
Query:  299 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL-------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            R +  +  S+ E   RF  F  N+  + +TN+    Y+L LNKFAD +  EF+    G+  N     +G+   +   +       P + DWR+ G V+ VKDQG CGSCW FST  ++E        K +SLSEQ+LVDC +   NQGCNGGL   AFE+IK  GG+ TE  YPYT ++G C
Sbjct:   44 RSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKE-ENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTC 224          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.373e-32
Identity = 76/187 (40.64%), Postives = 109/187 (58.29%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTN---RKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            + ++   + ++Y   EE   R A + KN+ +I   N   R+G  S+ + +N F D + EEF++   G         K   +      P + DWRE G V+PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N+GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++
Sbjct:   29 WTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN 214          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.341e-32
Identity = 74/184 (40.22%), Postives = 101/184 (54.89%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            F  +   + K YE+V+E   RF  F  NL+ I  TN+K  SY LGLN+FAD S +EF    +G+  + +     + +   +    LPE  DWR+ G V+PV+ QG CGSCW FS   ++E       GK + LSEQ+LVDC +   + GC GG P  A EY+  N G+     YPY  K G C+
Sbjct:   48 FNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCR 228          
The following BLAST results are available for this feature:
BLAST of CK939401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
ORYB_ORYSJ1.621e-3344.38Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
ACTN_ACTCH1.621e-3342.37Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
LMCPB_LEIME4.718e-3342.33Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI4.718e-3342.33Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATLL_FASHE4.718e-3340.64Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATL2_HUMAN4.718e-3343.89Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATL1_BOVIN4.718e-3343.33Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CYSEP_VIGMU1.051e-3241.21Vignain OS=Vigna mungo PE=1 SV=1[more]
CATL1_HUMAN1.373e-3240.64Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
PAPA3_CARPA2.341e-3240.22Caricain OS=Carica papaya PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004751_B02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939401 ID=CK939401; Name=CK939401; organism=Citrus sinensis; type=EST; length=833bp
GGGGAATAATAACAATAATAATAGTGTTCATAGACTGCATTCATTTAATC
CGAAGCCCTTGAGTGCGGTGCACTCTCTCCAAACAAAACAGACACAATCA
TTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGA
TCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTC
CAGGTGATCGGCCAAGCCCGCCACGCTCTCTCCTTTGCCCGTTTTGCTCG
CAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCG
CGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAATCGTAAAGGC
CTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGAGCTGGGAAGA
GTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACTACAA
AAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGG
AGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATC
TTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCAGG
CCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTGTGCC
CAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAGCCTT
TGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATATCCCT
ACACCGGAAAAGATGGTGTCTGCAAATTCTCAT
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