CK939401

Overview
NameCK939401
Unique NameCK939401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.679e-28
Identity = 71/184 (38.59%), Postives = 104/184 (56.52%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQ-RHRLGAAQNCSATTKGNHKLTADVL--PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI--KYNGGLDTEEAYPYTGKDGV 820
            FA F +++G++YES  E   R + F +NL L R           G+  F+D + EEF+ R+  GAA   +A  +    +  +V+  P   DWR  G V+ VKDQG CGSCW FS  G++E  +  A     +LSEQ LV C +   + GC+GGL + AFE+I  + NG + TE++YPY   +G+
Sbjct:   38 FAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGI 219          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.499e-28
Identity = 75/193 (38.86%), Postives = 100/193 (51.81%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRH----RLGAAQNCSATTKGNHKLTA------DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            F  FA +Y K Y S EE  ++   F  NL +I   N         +N+++D +     R     RLG  +N SA T     +         +LPET DWR+   V+PVK+Q  CGSCW FST  ++E+ Y+  + K ++LSEQ LV+C     N GC GGL   A E I   GG+ + E  PY G DGVCK S
Sbjct:   32 FKNFAIKYNKTYVSDEERAIKLENFKNNLKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCDNI--NNGCAGGLMHWALESILQEGGVVSAENEPYYGFDGVCKKS 222          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.499e-28
Identity = 75/187 (40.11%), Postives = 102/187 (54.55%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNL---DLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            F  F   Y + YES EE + R   F++N+     I++ +R    Y  G+ KF+D + EEF    L    Q  S       K   D+ P   DWR+ G V+ VK+QG CGSCW FS TG++E  +    G  +SLSEQ+L+DC +   ++ C GGLPS A+  IK  GGL+TE+ Y Y G    C FS
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQY--GITKFSDLTEEEFHTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKV--DKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFS 347          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.968e-28
Identity = 71/185 (38.38%), Postives = 100/185 (54.05%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLT---ADV-LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            F  +  ++ KIY++++E   RF  F  NL  I  TN+K  SY LGLN FAD S +EF+    G+      TT+ +++      DV +PE  DWR+ G V+PVK+QG CGSCW FS   ++E       G     SEQ+L+DC +   + GCNGG P  A + +    G+     YPY G    C+
Sbjct:   48 FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDR--RSYGCNGGYPWSALQLVA-QYGIHYRNTYPYEGVQRYCR 229          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.968e-28
Identity = 72/186 (38.71%), Postives = 102/186 (54.84%), Query Frame = 2
Query:  299 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 829
            + Y K Y+   E   R   + KNL  +   N +   G+ SY LG+N   D + EE        R+ +    + T + N       LP++ DWRE G V+ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  + AF+YI  N G+D+E +YPY   +G C++
Sbjct:   33 KTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSN---QKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRY 215          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.794e-28
Identity = 74/186 (39.78%), Postives = 106/186 (56.99%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNL---DLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA---QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            + +F  +Y K Y   E+ ++RF  F  N+    L +   R    Y  G+  ++D + +EF R  L A+    +  + T  +     + +P+  DWRE G V+ VK+QG CGSCW FSTTG++E+ + +  GK +SLSEQQLVDC     + GCNGGLPS A+E I   GGL  E+ YPY  K+  C
Sbjct:   20 YVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRGSAIY--GVTPYSDLTTDEFARTHLTASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGL--DDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKC 200          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27
Identity = 77/196 (39.29%), Postives = 103/196 (52.55%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRS--TNRKGLSYRLGLNKFADWSWEEFQRHRLGA---------AQNCSATTKGNHKLTADVLPETKDWRESGIVS--PVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            +A +  +Y + Y S  +   RF  FS NL+ IR+   + +  +Y L LN+FAD S +EF    L           A N +   KG     A+V     DW ++  V    VK+QG CGSCW FS  G+LE        K   LSEQ LVDC+  ++N+GCNGG    AFEY+  NG  + ++ YPYT KDG CK S
Sbjct:   26 YANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLRVPKTAKLNASNANFQYKG-----AEV-----DWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVADNGLAEAKD-YPYTAKDGTCKTS 210          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27
Identity = 68/185 (36.76%), Postives = 102/185 (55.14%), Query Frame = 2
Query:  299 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            + +GK Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +   T +    +P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ NGG+D+E+AYPY G+D  C ++
Sbjct:   31 KTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSRSFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVS--ENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYN 213          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.268e-27
Identity = 70/180 (38.89%), Postives = 98/180 (54.44%), Query Frame = 2
Query:  302 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYR----LGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 829
            ++GK Y   EE +L+ A + KN  +I   N + L  R    + +N F D +  EF +   G  +     T          +P+  DWR+ G V+PVK+QGHC S W FS TGSLE    +   + I LSEQ L+DC  +    GC+GG    AF+Y+K NGGL TEE+YPY G+   C++
Sbjct:   35 KHGKTYNMNEE-RLKRAVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLYVPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRY 213          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.868e-27
Identity = 70/188 (37.23%), Postives = 97/188 (51.60%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            F +F  R+G+ Y S  E ++R   F +NL  I   N   + S + G+ +FAD +  E+ + R G  Q   A   G            LP+  DWR+   V+ VK+QG CGSCW FS TG++E  Y    G+    SEQ+L+DC     +  CNGGL   A++ IK  GGL+ E  YPY  K   C F+
Sbjct:  308 FYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEY-KERTGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDT--TDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFN 492          
The following BLAST results are available for this feature:
BLAST of CK939401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CYSP_TRYCR2.679e-2838.59Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATV_GVCP3.499e-2838.86Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATF_MOUSE3.499e-2840.11Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
PAPA1_CARPA5.968e-2838.38Papain OS=Carica papaya PE=1 SV=1[more]
CATS_CANFA5.968e-2838.71Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATL_SCHMA7.794e-2839.78Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATL2_PARTE1.736e-2739.29Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATK_RAT1.736e-2736.76Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
TEST2_RAT2.268e-2738.89Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CPR1_DROME3.868e-2737.23Putative cysteine proteinase CG12163 OS=Drosophila... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004751_B02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939401 ID=CK939401; Name=CK939401; organism=Citrus sinensis; type=EST; length=833bp
GGGGAATAATAACAATAATAATAGTGTTCATAGACTGCATTCATTTAATC
CGAAGCCCTTGAGTGCGGTGCACTCTCTCCAAACAAAACAGACACAATCA
TTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGA
TCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTC
CAGGTGATCGGCCAAGCCCGCCACGCTCTCTCCTTTGCCCGTTTTGCTCG
CAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCG
CGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAATCGTAAAGGC
CTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGAGCTGGGAAGA
GTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACTACAA
AAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGG
AGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATC
TTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCAGG
CCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTGTGCC
CAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAGCCTT
TGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATATCCCT
ACACCGGAAAAGATGGTGTCTGCAAATTCTCAT
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