CK939401

Overview
NameCK939401
Unique NameCK939401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.052e-27
Identity = 71/186 (38.17%), Postives = 104/186 (55.91%), Query Frame = 2
Query:  299 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK---GL-SYRLGLNKFADWSWEEFQRHRLGAAQ--NCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA--QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            + + K Y+   E ++R   + KNL  I   N +   G+ +Y++G+N   D + EE    R+GA +    S  T      +   LP+T DWRE G V+ VK QG CG+CW FS  G+LE       GK ISLS Q LVDC+  + + N+GC GG  ++AF+YI  NGG++ + +YPY   D  C ++
Sbjct:   41 KTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISC-RMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYN 225          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.052e-27
Identity = 69/192 (35.94%), Postives = 101/192 (52.60%), Query Frame = 2
Query:  302 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA-----------DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            +Y K+Y   EE+ L+   + +N+  I   NR+      +Y + +N FAD + EEF+   +G       T K   K              D LP+  DWR  G V+ V+ QG C SCW F  TG++E    +  GK I LS Q L+DC++   N+GC  G    AF+Y+ +NGGL+ E  YPY  K+GVC+++
Sbjct:   35 KYEKLYSPEEEV-LKRVVWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGSFFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGVCRYN 225          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.052e-27
Identity = 64/184 (34.78%), Postives = 100/184 (54.35%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTN-RKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK---GNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            F  +   YG++Y+  +E   RF  F  N+  I + N R   SY LG+N+F D +  EF     G +   +   +       +    +P++ DWR+ G V+ VK+Q  CGSCW+F+   ++E  Y    G  +SLSEQ+++DCA ++   GC GG  ++A+++I  N G+ TEE YPY    G C
Sbjct:   37 FEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY---GCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTC 217          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.125e-26
Identity = 67/185 (36.22%), Postives = 102/185 (55.14%), Query Frame = 2
Query:  299 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            + + K Y S  +   R   + KNL  I + N +      +Y L +N   D + EE  +   G     S +   +   T +    +P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ NGG+D+E+AYPY G+D  C ++
Sbjct:   31 KTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVT--ENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYN 213          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.125e-26
Identity = 63/146 (43.15%), Postives = 80/146 (54.79%), Query Frame = 2
Query:  404 SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            S++L +N   D + EE  R   G     S           D     P   DWR  G V+PVKDQG CGSCW FS+ G+LE    +  GK +SLS Q LV C    NN GC GG  + AFEY++ N G+D+E+AYPY G+D  C +S
Sbjct:   75 SFQLAMNYLGDMTSEEVVRTMTGLRVPRSRPRPNGTLYVPDWSSRAPAAVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYCVS--NNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQDESCMYS 218          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.470e-26
Identity = 55/100 (55.00%), Postives = 72/100 (72.00%), Query Frame = 2
Query:  524 DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            D LPE+ DWRE G++  VKDQG CGSCW FS   ++E+      G  ISLSEQ+LVDC +++ N+GC+GGL   AFE++  NGG+DTEE YPY  ++GVC
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSY-NEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVC 114          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.470e-26
Identity = 56/100 (56.00%), Postives = 70/100 (70.00%), Query Frame = 2
Query:  524 DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            D LP++ DWRE+G V PVK+QG CGSCW FST  ++E       G  ISLSEQQLVDC  A  N GC GG  + AF++I  NGG+++EE YPY G+DG+C
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA--NHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGIC 98          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.507e-26
Identity = 56/100 (56.00%), Postives = 68/100 (68.00%), Query Frame = 2
Query:  524 DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            DVLP++ DWRE G V PVK+QG CGSCW F    ++E       G  ISLSEQQLVDC+    N GC GG P +AF+YI  NGG+++EE YPYTG +G C
Sbjct:    1 DVLPDSIDWREKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCST--RNHGCEGGWPYRAFQYIINNGGINSEEHYPYTGTNGTC 98          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.275e-26
Identity = 67/185 (36.22%), Postives = 98/185 (52.97%), Query Frame = 2
Query:  299 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            + Y K Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +     D     P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G+D  C ++
Sbjct:   31 KTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYN 213          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 4.277e-26
Identity = 67/184 (36.41%), Postives = 99/184 (53.80%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            F  +  ++ K Y++V+E   RF  F  NL  I   N+    Y LGLN+F+D S +EF+   +G+  ++ +        +  D+  LPE+ DWR  G V+PVK QG+C SCW FST  ++E       G  + LSEQ+LVDC +   + GCN G  S + +Y+  N G+     YPY  K   C+
Sbjct:   48 FNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGSLPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDK--QSYGCNRGYQSTSLQYVAQN-GIHLRAKYPYIAKQQTCR 228          
The following BLAST results are available for this feature:
BLAST of CK939401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CATS_MOUSE5.052e-2738.17Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATQ_RAT5.052e-2735.94Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
BROM1_ANACO5.052e-2734.78Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATK_MOUSE1.125e-2636.22Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATK_CHICK1.125e-2643.15Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CYSPL_SOLLC1.470e-2655.00Low-temperature-induced cysteine proteinase (Fragm... [more]
CPGP2_ZINOF1.470e-2656.00Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CPGP1_ZINOF2.507e-2656.00Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CATK_BOVIN3.275e-2636.22Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
PAPA4_CARPA4.277e-2636.41Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCGF1004751_B02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939401 ID=CK939401; Name=CK939401; organism=Citrus sinensis; type=EST; length=833bp
GGGGAATAATAACAATAATAATAGTGTTCATAGACTGCATTCATTTAATC
CGAAGCCCTTGAGTGCGGTGCACTCTCTCCAAACAAAACAGACACAATCA
TTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGA
TCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTC
CAGGTGATCGGCCAAGCCCGCCACGCTCTCTCCTTTGCCCGTTTTGCTCG
CAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCG
CGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAATCGTAAAGGC
CTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGAGCTGGGAAGA
GTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACTACAA
AAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGG
AGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATC
TTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCAGG
CCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTGTGCC
CAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAGCCTT
TGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATATCCCT
ACACCGGAAAAGATGGTGTCTGCAAATTCTCAT
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