CK939394

Overview
NameCK939394
Unique NameCK939394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.486e-44
Identity = 82/112 (73.21%), Postives = 101/112 (90.18%), Query Frame = 2
Query:  473 DDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            DDK++  ++V+G+    G +I+TT+GG+NG+PKQTISYMAERVVGTGSFG+VFQAKCLETG++VAIKKVLQD+RYKNRELQ+MR+++HPNVV LKHCFFSTT KDEL  NLV
Sbjct:    3 DDKEMPAAVVDGHDQVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVVCLKHCFFSTTSKDELFLNLV 114          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.941e-44
Identity = 81/111 (72.97%), Postives = 99/111 (89.19%), Query Frame = 2
Query:  476 DKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            DK++  +++ GN    G +I+TT+GG+NG+PKQTISYMAERVVGTGSFG+VFQAKCLETG+SVAIKKVLQD+RYKNRELQ+MR ++HPNV+SLKHCFFSTT +DEL  NLV
Sbjct:   34 DKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRPMDHPNVISLKHCFFSTTSRDELFLNLV 144          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: KSG10_ARATH (Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.954e-41
Identity = 76/112 (67.86%), Postives = 94/112 (83.93%), Query Frame = 2
Query:  473 DDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            D++D EP I++G G E G VI TT+ GRNGQ +QT+SY++E VVGTGSFG+VFQAKC ETG+ VAIKKVLQDKRYKNRELQIM++L+HPN V+LKH FFS T+ +E+  NLV
Sbjct:   46 DERDSEPDIIDGAGAEPGHVIRTTLRGRNGQSRQTVSYISEHVVGTGSFGMVFQAKCRETGEVVAIKKVLQDKRYKNRELQIMQMLDHPNAVALKHSFFSRTDNEEVYLNLV 157          

HSP 2 Score: 28.1054 bits (61), Expect = 3.954e-41
Identity = 15/41 (36.59%), Postives = 23/41 (56.10%), Query Frame = 3
Query:  336 MASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDE 458
            MAS+ L     TS +A   ++  S  D L +++ E RIRD+
Sbjct:    1 MASSGLGNGVGTSRSAKGLKSSSSSVDWLTRDLAETRIRDK 41          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: KSG2_ARATH (Shaggy-related protein kinase beta OS=Arabidopsis thaliana GN=ASK2 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.150e-41
Identity = 79/110 (71.82%), Postives = 91/110 (82.73%), Query Frame = 2
Query:  479 KDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            +D++  I+ GNGTE+G++I T   G N Q  +TISY AE V+GTGSFGVVFQAKCLET + VAIKKVLQDKRYKNRELQIMR+L+HPNVV LKH FFSTTEKDEL  NLV
Sbjct:   67 EDMDCGIIKGNGTESGRIITTKKKGLNDQKDKTISYRAEHVIGTGSFGVVFQAKCLETEEKVAIKKVLQDKRYKNRELQIMRMLDHPNVVELKHSFFSTTEKDELYLNLV 176          

HSP 2 Score: 28.1054 bits (61), Expect = 5.150e-41
Identity = 28/91 (30.77%), Postives = 37/91 (40.66%), Query Frame = 3
Query:  171 MNVMRRLKSIASGRTXXXXXXXXXXXXKRAKVDKELEVNGEANLVERSASSLEQHMASTSLEPVASTS-EAATVARTERSGFDQLPKEMNE 440
            MNV+RRL SIASGR              R+K ++  E                        E   +TS E  +V+ +E S  D LPKE+ E
Sbjct:    1 MNVVRRLTSIASGRNFVSSDNVGETETPRSKPNQNRE----------------------ETESTETTSYEKDSVSSSENS--DHLPKEIRE 67          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: KSG4_ARATH (Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 4.279e-40
Identity = 79/119 (66.39%), Postives = 96/119 (80.67%), Query Frame = 2
Query:  452 R*KNVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            R K    +++D EP I++G G E G VI TT+ GRNGQ +QT+SY+AE VVGTGSFG+VFQAKC ETG+ VAIKKVLQDKRYKNRELQIM++L+HPNVV LKH F+S TE +E+  NLV
Sbjct:   38 RDKTEADEERDSEPDIIDGVGAEPGHVITTTLPGRNGQSRQTVSYIAEHVVGTGSFGMVFQAKCRETGEVVAIKKVLQDKRYKNRELQIMQMLDHPNVVCLKHSFYSRTENEEVYLNLV 156          

HSP 2 Score: 23.8682 bits (50), Expect = 4.279e-40
Identity = 11/30 (36.67%), Postives = 18/30 (60.00%), Query Frame = 3
Query:  369 TSEAATVARTERSGFDQLPKEMNEMRIRDE 458
            +S +A   +   S  D L ++M EM+IRD+
Sbjct:   11 SSRSAKNTKNTSSSVDWLSRDMLEMKIRDK 40          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: GSK3_CAEEL (Glycogen synthase kinase-3 OS=Caenorhabditis elegans GN=gsk-3 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.309e-21
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 2
Query:  509 NGTEAGQVIATTVGGRNGQPKQT-ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELXXNLV 808
            +G +   V+A+     +G  +Q  ISY  ++V+G GSFGVVF AK   T + VAIKKVLQDKR+KNRELQIMR LNHPN+V LK+ F+S+ E KDEL  NL+
Sbjct:   12 SGKQVTMVVASVA--TDGVDQQVEISYYDQKVIGNGSFGVVFLAKLSTTNEMVAIKKVLQDKRFKNRELQIMRKLNHPNIVKLKYFFYSSGEKKDELYLNLI 111          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: SGG_DROME (Protein kinase shaggy OS=Drosophila melanogaster GN=sgg PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.938e-21
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 2
Query:  494 SIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEK-DELXXNLV 808
            +I+  +G++   V+AT   G+     Q +SY   +V+G GSFGVVFQAK  +TG+ VAIKKVLQD+R+KNRELQIMR L H N+V L + F+S+ EK DE+  NLV
Sbjct:  579 NILGRDGSKITTVVATP--GQGTDRVQEVSYTDTKVIGNGSFGVVFQAKLCDTGELVAIKKVLQDRRFKNRELQIMRKLEHCNIVKLLYFFYSSGEKRDEVFLNLV 682          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: GSK3_CAEBR (Glycogen synthase kinase-3 OS=Caenorhabditis briggsae GN=gsk-3 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.143e-21
Identity = 56/102 (54.90%), Postives = 73/102 (71.57%), Query Frame = 2
Query:  509 NGTEAGQVIATTVGGRNGQPKQT-ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFST-TEKDELXXNLV 808
            +G +   V+A+     +G  +Q  ISY  ++V+G GSFGVVF AK   T + VAIKKVLQDKR+KNRELQIMR LNHPN+V LK+ F+S+  +KDEL  NL+
Sbjct:   12 SGKQVTMVVASVA--TDGVDQQVEISYYDQKVIGNGSFGVVFLAKLSTTNEMVAIKKVLQDKRFKNRELQIMRKLNHPNIVKLKYFFYSSGDKKDELYLNLI 111          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: GSK3B_RAT (Glycogen synthase kinase-3 beta OS=Rattus norvegicus GN=Gsk3b PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.717e-21
Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = 2
Query:  509 NGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELXXNLV 808
            +G++   V+AT   G+     Q +SY   +V+G GSFGVV+QAK  ++G+ VAIKKVLQDKR+KNRELQIMR L+H N+V L++ F+S+ E KDE+  NLV
Sbjct:   33 DGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: GSK3B_MOUSE (Glycogen synthase kinase-3 beta OS=Mus musculus GN=Gsk3b PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 6.717e-21
Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = 2
Query:  509 NGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELXXNLV 808
            +G++   V+AT   G+     Q +SY   +V+G GSFGVV+QAK  ++G+ VAIKKVLQDKR+KNRELQIMR L+H N+V L++ F+S+ E KDE+  NLV
Sbjct:   33 DGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131          
The following BLAST results are available for this feature:
BLAST of CK939394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
KSG7_ARATH1.486e-4473.21Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
KSG9_ARATH1.941e-4472.97Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG10_ARATH3.954e-4167.86Shaggy-related protein kinase kappa OS=Arabidopsis... [more]
KSG2_ARATH5.150e-4171.82Shaggy-related protein kinase beta OS=Arabidopsis ... [more]
KSG4_ARATH4.279e-4066.39Shaggy-related protein kinase delta OS=Arabidopsis... [more]
GSK3_CAEEL2.309e-2155.88Glycogen synthase kinase-3 OS=Caenorhabditis elega... [more]
SGG_DROME3.938e-2152.83Protein kinase shaggy OS=Drosophila melanogaster G... [more]
GSK3_CAEBR5.143e-2154.90Glycogen synthase kinase-3 OS=Caenorhabditis brigg... [more]
GSK3B_RAT6.717e-2153.47Glycogen synthase kinase-3 beta OS=Rattus norvegic... [more]
GSK3B_MOUSE6.717e-2153.47Glycogen synthase kinase-3 beta OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004751_B03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939394 ID=CK939394; Name=CK939394; organism=Citrus sinensis; type=EST; length=809bp
GGGGGTGTTTGTATTTTCTGTTTTTTAATTTCCTTTTGGGTCGCCGAGGA
AGAGAGAGAAATTCTCTCTCTCCTTTTGAAGCAATACCGTTCTTTTGAAT
TTGGCGTTGGATTTGTTCATTCTTTCATTTTTGAAGTGGAGAATCAATTA
GGGTTTCGTTTTCAGAAACAATGAATGTCATGCGCCGTCTCAAGAGCATT
GCTTCTGGTCGCACTTCTATTTCTTCTGATCCGGGTGGAGATTCTGGCAT
AAAGAGGGCAAAGGTCGATAAAGAATTAGAGGTAAATGGGGAAGCAAATT
TGGTTGAAAGAAGTGCCTCCAGTCTAGAGCAGCATATGGCTTCTACATCT
CTGGAGCCTGTTGCAAGCACGTCCGAAGCAGCCACAGTTGCTAGAACTGA
AAGATCAGGTTTTGATCAACTGCCTAAGGAAATGAATGAGATGAGAATAA
GAGATGAAAAAATGTTAACCATGATGATAAGGATTTGGAACCCTCAATTG
TCAATGGCAATGGAACAGAAGCAGGTCAAGTCATTGCTACTACAGTAGGT
GGTCGAAATGGACAACCAAAGCAGACAATCTCCTATATGGCAGAACGTGT
GGTGGGGACTGGTTCCTTTGGTGTTGTCTTCCAAGCTAAGTGCCTTGAAA
CAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAGAGATACAAG
AATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTC
TCTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTNNNTTA
ACCTTGTCT
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