CK939394

Overview
NameCK939394
Unique NameCK939394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: GSK31_SCHPO (Protein kinase gsk31 OS=Schizosaccharomyces pombe GN=gsk31 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.236e-16
Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 2 
Query:  551 GRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFST--TEKDE 790
            G  G+ K+TISY   RV+G+GSFGVV QAK + T   +A+K+VLQDKRYKNRELQIMR ++HPN++ L   FF T    KDE
Sbjct:   15 GTTGE-KKTISYEPCRVLGSGSFGVVIQAKLVGTPGFIAVKRVLQDKRYKNRELQIMRAISHPNIIKL-IAFFHTHNPSKDE 94
The following BLAST results are available for this feature:
BLAST of CK939394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GSK31_SCHPO2.236e-1658.54Protein kinase gsk31 OS=Schizosaccharomyces pombe ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004751_B03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939394 ID=CK939394; Name=CK939394; organism=Citrus sinensis; type=EST; length=809bp
GGGGGTGTTTGTATTTTCTGTTTTTTAATTTCCTTTTGGGTCGCCGAGGA
AGAGAGAGAAATTCTCTCTCTCCTTTTGAAGCAATACCGTTCTTTTGAAT
TTGGCGTTGGATTTGTTCATTCTTTCATTTTTGAAGTGGAGAATCAATTA
GGGTTTCGTTTTCAGAAACAATGAATGTCATGCGCCGTCTCAAGAGCATT
GCTTCTGGTCGCACTTCTATTTCTTCTGATCCGGGTGGAGATTCTGGCAT
AAAGAGGGCAAAGGTCGATAAAGAATTAGAGGTAAATGGGGAAGCAAATT
TGGTTGAAAGAAGTGCCTCCAGTCTAGAGCAGCATATGGCTTCTACATCT
CTGGAGCCTGTTGCAAGCACGTCCGAAGCAGCCACAGTTGCTAGAACTGA
AAGATCAGGTTTTGATCAACTGCCTAAGGAAATGAATGAGATGAGAATAA
GAGATGAAAAAATGTTAACCATGATGATAAGGATTTGGAACCCTCAATTG
TCAATGGCAATGGAACAGAAGCAGGTCAAGTCATTGCTACTACAGTAGGT
GGTCGAAATGGACAACCAAAGCAGACAATCTCCTATATGGCAGAACGTGT
GGTGGGGACTGGTTCCTTTGGTGTTGTCTTCCAAGCTAAGTGCCTTGAAA
CAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAGAGATACAAG
AATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTC
TCTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTNNNTTA
ACCTTGTCT
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