CK939318

Overview
NameCK939318
Unique NameCK939318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1192 contig Csv1_Contig1192:397..1159. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939318 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.120e-14
Identity = 62/211 (29.38%), Postives = 98/211 (46.45%), Query Frame = 2
Query:  122 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLPKLEATALNPVDWKVQKG--QLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RXXEFVKSLGADXVLDYK 745
            G+ LM A++   +GG        ++ VP P   +VL K+ A  +NPV+  ++ G    +P L    P  P +D              FK GD+V  F     T  GG AEFA++ +++T   P  +   +G+ L +   TA +AL  SA  +       +++LV  ASGGVG    Q+A+     V  + G+    + V   GA  V ++K
Sbjct:    4 GQKLMRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTYSRKPAL----PYTPGSDVAGIIESVGDGVSAFKKGDRVFCF----STVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARARAG-----ESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHK 201          
BLAST of CK939318 vs. ExPASy Swiss-Prot
Match: QOR_PONAB (Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.463e-14
Identity = 61/211 (28.91%), Postives = 98/211 (46.45%), Query Frame = 2
Query:  122 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLPKLEATALNPVDWKVQKG--QLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARXXE-FVKSLGADXVLDYK 745
            G+ LM AV+   +GG        +++VP P   + L K+ A  +NPV+  ++ G    +P L    P  P +D              FK GD+V        T  GG AE+A+A + +    P ++   +G+ + +   TA++AL  SA VK       +++LV  ASGGVG  A Q+A+     V  + G    +  V   GA  V +++
Sbjct:    4 GQKLMRAVRVFEFGGPEVLKLQSDIAVPIPKDHQALIKVHACGVNPVETYIRSGTYSRKPLL----PYTPGSDVAGVIEAVGGNASAFKKGDRVFT----SSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAHVKAG-----ESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKIVLQNGAHEVFNHR 201          
BLAST of CK939318 vs. ExPASy Swiss-Prot
Match: QOR_PIG (Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14
Identity = 60/211 (28.44%), Postives = 98/211 (46.45%), Query Frame = 2
Query:  122 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLPKLEATALNPVDWKVQKG--QLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARXXE-FVKSLGADXVLDYK 745
            G+ LM A++   +GG        ++++P P  ++VL K+ A  +NPVD  ++ G   ++P L    P  P  D              FK GD+V      + T  GG AE+A+A + +    P ++   +G+ + +   TA  AL  SA VK       + +L+  ASGGVG  A Q+A+     V  + G    +  V   GA  V +++
Sbjct:    4 GQKLMSAIRVFKFGGPEVMKLQSDVAIPIPKDNQVLIKVHACGVNPVDTYIRSGTHNMKPLL----PYTPGLDVAGIVEAVGEHVSSFKKGDRVFT----VSTLSGGYAEYALAADDTVYMLPEKLDFKQGAAIGIPYFTACLALLHSACVKAG-----EIVLIHGASGGVGIAACQIARAYGLKVLGTAGTEEGQNIVLQNGAHEVFNHR 201          
BLAST of CK939318 vs. ExPASy Swiss-Prot
Match: QOR_MOUSE (Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.559e-14
Identity = 61/211 (28.91%), Postives = 97/211 (45.97%), Query Frame = 2
Query:  122 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLPKLEATALNPVDWKVQKG--QLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RXXEFVKSLGADXVLDYK 745
            G+ LM A++   +GG        ++ VP P   +VL K+ A  +NPV+  ++ G    +P L    P  P +D              FK GD+V  +     T  GG AEFA+A + +    P  ++  +G+ L +   TA +AL  SA  +       +++LV  ASGGVG    Q+A+     V  + G+    + V   GA  V ++K
Sbjct:    4 GQKLMRAIRVFEFGGPEVLKLQSDVVVPVPQSHQVLIKVHACGVNPVETYIRSGAYSRKPAL----PYTPGSDVAGIIESVGDKVSAFKKGDRVFCY----STVSGGYAEFALAADDTIYPLPETLNFRQGAALGIPYFTACRALFHSARARAG-----ESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHK 201          
BLAST of CK939318 vs. ExPASy Swiss-Prot
Match: QOR_CAVPO (Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.559e-14
Identity = 61/211 (28.91%), Postives = 96/211 (45.50%), Query Frame = 2
Query:  122 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLPKLEATALNPVDWKVQKGQLR--PFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARXXE-FVKSLGADXVLDYK 745
            G+ LM A++   +GG        +++VP P   +VL K+ A  +NPV+  ++ G     P L    P  P TD              FK GD+V        T  GG AE+A+A + +    P ++   +G+ + +   TA +AL  SA  K       +++LV  ASGGVG  A Q+A+     V  + G    +  V   GA  V +++
Sbjct:    4 GQKLMRAIRVFEFGGPEVLKVQSDVAVPIPKDHQVLIKVHACGINPVETYIRSGTYTRIPLL----PYTPGTDVAGVVESIGNDVSAFKKGDRVFT----TSTISGGYAEYALASDHTVYRLPEKLDFRQGAAIGIPYFTACRALFHSARAKAG-----ESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKVVLQNGAHEVFNHR 201          
BLAST of CK939318 vs. ExPASy Swiss-Prot
Match: YBI2_SCHPO (Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe GN=SPBC16A3.02c PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.483e-14
Identity = 64/202 (31.68%), Postives = 92/202 (45.54%), Query Frame = 2
Query:  164 GGAADLKHVE--LSVPTPSK---DEVLPKLEATALNPVDWKVQKG-QLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNY--LVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARXXEFVKSLGADXVLDYK 745
            G   D+ ++E  L +P P++    +VL ++ AT++NP+D+K+    Q+      K P IP  D            K F A  +V    ++      GG  A   V  +      P  VS  EG+G  +AGLTA + L +   VK         +++  ASGGVG +AV LAK     VT        +  KSLGA   LDYK
Sbjct:   21 GKPKDVLYLEKGLHIPNPAELGPYDVLVEVVATSINPLDYKLMNTYQMIAKALFKLPNIPGYDFAGRVLAVGSEVKEFSATQRVWGCQSFPRAGRQGGSCATHIVTGDKDVWHLPDGVSFNEGAGFGIAGLTAWEVLVRQMKVK-----PGTKLVIEGASGGVGTFAVALAKALECEVTTISSTENLDLCKSLGATHTLDYK 217          
BLAST of CK939318 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAC (Zinc-type alcohol dehydrogenase-like protein SACOL2177 OS=Staphylococcus aureus (strain COL) GN=SACOL2177 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13
Identity = 52/190 (27.37%), Postives = 89/190 (46.84%), Query Frame = 2
Query:  182 KHVELSVPTPSKDEVLPKLEATALNPVDWKVQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLD-GSGQQKNILVTAASGGVGHYAVQLAK-LGNTHVTASCGARXXEFVKSLGADXVLDYK 745
            K  E   PTP  D++L K+ + ++NPVD K ++ ++      + P +   D             +F  GD  V F        G  A + +  E+     P  +SA E   LP+ G+TA++    +  +  +    + K++L+   +GGVG  A Q+AK  G T +T +      E+ + +GAD VL++K
Sbjct:   19 KVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEV-----TQAPRVLGFDAIGTVEAIGPDVTLFSPGD--VVFYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISTNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK 201          
BLAST of CK939318 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAW (Zinc-type alcohol dehydrogenase-like protein MW2112 OS=Staphylococcus aureus (strain MW2) GN=MW2112 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.027e-13
Identity = 52/190 (27.37%), Postives = 89/190 (46.84%), Query Frame = 2
Query:  182 KHVELSVPTPSKDEVLPKLEATALNPVDWKVQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLD-GSGQQKNILVTAASGGVGHYAVQLAK-LGNTHVTASCGARXXEFVKSLGADXVLDYK 745
            K  E   PTP  D++L K+ + ++NPVD K ++ ++      + P +   D             +F  GD  V F        G  A + +  E+     P  +SA E   LP+ G+TA++    +  +  +    + K++L+   +GGVG  A Q+AK  G T +T +      E+ + +GAD VL++K
Sbjct:   19 KVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEV-----TQAPRVLGFDAIGTVEAIGPDVTLFSPGD--VVFYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK 201          
BLAST of CK939318 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAS (Zinc-type alcohol dehydrogenase-like protein SAS2087 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2087 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.027e-13
Identity = 52/190 (27.37%), Postives = 89/190 (46.84%), Query Frame = 2
Query:  182 KHVELSVPTPSKDEVLPKLEATALNPVDWKVQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLD-GSGQQKNILVTAASGGVGHYAVQLAK-LGNTHVTASCGARXXEFVKSLGADXVLDYK 745
            K  E   PTP  D++L K+ + ++NPVD K ++ ++      + P +   D             +F  GD  V F        G  A + +  E+     P  +SA E   LP+ G+TA++    +  +  +    + K++L+   +GGVG  A Q+AK  G T +T +      E+ + +GAD VL++K
Sbjct:   19 KVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEV-----TQAPRVLGFDAIGTVEAIGPDVTLFSPGD--VVFYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK 201          
BLAST of CK939318 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAR (Zinc-type alcohol dehydrogenase-like protein SAR2277 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2277 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.369e-12
Identity = 53/190 (27.89%), Postives = 89/190 (46.84%), Query Frame = 2
Query:  182 KHVELSVPTPSKDEVLPKLEATALNPVDWKVQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQ-QKNILVTAASGGVGHYAVQLAK-LGNTHVTASCGARXXEFVKSLGADXVLDYK 745
            K  E   PTP  D++L K+ + ++NPVD K ++ ++      + P +   D             +F  GD  V F        G  A + +  E+     P  +SA E   LP+ G+TA++    +  +  + S    K++L+   +GGVG  A Q+AK  G T +T +      E+ + +GAD VL++K
Sbjct:   19 KVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEV-----TQAPRVLGFDAIGTVEAIGPNVTLFSPGD--VVFYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPSENIGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK 201          
The following BLAST results are available for this feature:
BLAST of CK939318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
QOR_RAT1.120e-1429.38Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]
QOR_PONAB1.463e-1428.91Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=... [more]
QOR_PIG2.495e-1428.44Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 ... [more]
QOR_MOUSE5.559e-1428.91Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=... [more]
QOR_CAVPO5.559e-1428.91Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ ... [more]
YBI2_SCHPO9.483e-1431.68Zinc-type alcohol dehydrogenase-like protein C16A3... [more]
ZDH1_STAAC4.706e-1327.37Zinc-type alcohol dehydrogenase-like protein SACOL... [more]
ZDH1_STAAW8.027e-1327.37Zinc-type alcohol dehydrogenase-like protein MW211... [more]
ZDH1_STAAS8.027e-1327.37Zinc-type alcohol dehydrogenase-like protein SAS20... [more]
ZDH1_STAAR1.369e-1227.89Zinc-type alcohol dehydrogenase-like protein SAR22... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004752_C04 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IVF_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939318 ID=CK939318; Name=CK939318; organism=Citrus sinensis; type=EST; length=763bp
GGGGACGCTGTCACTGCGTTACATACATATTATAATCGTATGCAGAGTGG
TCTCTTTGATTCTATCGATAGCACACTCGAAATCCCAGAAACGGCATCGT
GTATTAGCTGTGAAAATGGCAGGAAAGCCTCTTATGCACGCGGTTCAGTA
TAATTCTTATGGTGGAGGAGCTGCTGATTTGAAGCATGTTGAACTGTCGG
TTCCTACCCCAAGCAAAGATGAGGTTTTGCCTAAACTTGAAGCAACCGCT
CTAAATCCGGTTGACTGGAAAGTCCAGAAGGGCCAGTTACGCCCTTTTTT
GCCTCGCAAGTTTCCTTGCATACCTGCAACTGATGTAGCAGGAGAGGTCG
TAGGGGTAGGATCAGAAGTTAAAATTTTCAAAGCTGGTGACAAAGTTGTA
GCTTTTCTTAACTACCTCGTAACTAATGGAGGTGGACTAGCTGAGTTTGC
TGTGGCTAAGGAGAGCTCGACAGTTACCAGGCCACCAGAGGTTTCAGCAG
CTGAAGGTTCTGGCTTACCTGTTGCTGGTCTCACTGCTCACCAGGCCCTT
ACTCAATCTGCAGGTGTCAAGCTTGATGGAAGTGGGCAACAGAAAAACAT
TCTAGTAACTGCCGCCTCAGGGGGTGTAGGTCACTATGCTGTTCAGTTGG
CGAAGCTTGGAAACACGCACGTGACTGCCTCTTGTGGGGCTCGCAANNNN
GAATTTGTCAAGAGTTTAGGGGCTGATGNGGTTCTTGATTACAAGACACC
TGACGGGGCAGCT
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