CK939311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939311 vs. ExPASy Swiss-Prot
Match: RS18_MOUSE (40S ribosomal protein S18 OS=Mus musculus GN=Rps18 PE=2 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 51/84 (60.71%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 3 NTNVHGKQRIMCALTSIKGIGRRXANIVCKKADIDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 254 NTN+ G+++I A+T+IKG+GRR A++V +KADID+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++ Sbjct: 17 NTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLA 100
BLAST of CK939311 vs. ExPASy Swiss-Prot
Match: RS18_HUMAN (40S ribosomal protein S18 OS=Homo sapiens GN=RPS18 PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 51/84 (60.71%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 3 NTNVHGKQRIMCALTSIKGIGRRXANIVCKKADIDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 254 NTN+ G+++I A+T+IKG+GRR A++V +KADID+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++ Sbjct: 17 NTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLA 100
BLAST of CK939311 vs. ExPASy Swiss-Prot
Match: RS18_CAPHI (40S ribosomal protein S18 OS=Capra hircus GN=RPS18 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 51/84 (60.71%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 3 NTNVHGKQRIMCALTSIKGIGRRXANIVCKKADIDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 254 NTN+ G+++I A+T+IKG+GRR A++V +KADID+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++ Sbjct: 17 NTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLA 100
BLAST of CK939311 vs. ExPASy Swiss-Prot
Match: RS18_CANFA (40S ribosomal protein S18 OS=Canis familiaris GN=RPS18 PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 51/84 (60.71%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 3 NTNVHGKQRIMCALTSIKGIGRRXANIVCKKADIDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 254 NTN+ G+++I A+T+IKG+GRR A++V +KADID+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++ Sbjct: 17 NTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLA 100
BLAST of CK939311 vs. ExPASy Swiss-Prot
Match: RS18_BOVIN (40S ribosomal protein S18 OS=Bos taurus GN=RPS18 PE=2 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 51/84 (60.71%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 3 NTNVHGKQRIMCALTSIKGIGRRXANIVCKKADIDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 254 NTN+ G+++I A+T+IKG+GRR A++V +KADID+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++ Sbjct: 17 NTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLA 100
BLAST of CK939311 vs. ExPASy Swiss-Prot
Match: RS18_DICDI (40S ribosomal protein S18 OS=Dictyostelium discoideum GN=rps18 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.061e-25 Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 3 Query: 3 NTNVHGKQRIMCALTSIKGIGRRXANIVCKKADIDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 254 NTNV G+++I ALT +KG+GRR AN+VCKKADID +KRAGELS E++ L ++ +PRQ+ IP WFLNRQKD KDGKYS ++ Sbjct: 19 NTNVDGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSKDEVERLTTIMNHPRQYNIPTWFLNRQKDIKDGKYSHCLA 102
BLAST of CK939311 vs. ExPASy Swiss-Prot
Match: RS18_DROME (40S ribosomal protein S18 OS=Drosophila melanogaster GN=RpS18 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.001e-24 Identity = 47/84 (55.95%), Postives = 68/84 (80.95%), Query Frame = 3 Query: 3 NTNVHGKQRIMCALTSIKGIGRRXANIVCKKADIDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 254 NTN+ GK+++ A+T+IKG+GRR +NIV KKAD+D+ KRAGE + E+D ++ +++NP Q+K+P+WFLNRQKD DGKY Q+ S Sbjct: 17 NTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTS 100
BLAST of CK939311 vs. ExPASy Swiss-Prot
Match: RS18_YEAST (40S ribosomal protein S18 OS=Saccharomyces cerevisiae GN=RPS18A PE=1 SV=4) HSP 1 Score: 104.375 bits (259), Expect = 1.873e-22 Identity = 46/78 (58.97%), Postives = 62/78 (79.49%), Query Frame = 3 Query: 3 NTNVHGKQRIMCALTSIKGIGRRXANIVCKKADIDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGK 236 NTNV G +I+ ALT+IKG+GRR +N+VCKKAD+D++KRAGEL+ EL+ ++ ++ NP +KIP WFLNRQ D DGK Sbjct: 19 NTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPTHYKIPAWFLNRQNDITDGK 96
BLAST of CK939311 vs. ExPASy Swiss-Prot
Match: RS18_ENTHI (40S ribosomal protein S18 OS=Entamoeba histolytica GN=RPS18 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.289e-20 Identity = 44/84 (52.38%), Postives = 64/84 (76.19%), Query Frame = 3 Query: 3 NTNVHGKQRIMCALTSIKGIGRRXANIVCKKADIDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 254 NTN+ G++++ ALT IKG GRR A +VCK+A ID+NKRAG ++ AE++ ++ ++ +KIP WFLNRQKD KDGK SQ+++ Sbjct: 18 NTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDILTTQLNYKIPVWFLNRQKDNKDGKDSQLIA 101
BLAST of CK939311 vs. ExPASy Swiss-Prot
Match: RS18_ENCCU (40S ribosomal protein S18 OS=Encephalitozoon cuniculi GN=RPS18 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.540e-13 Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 3 NTNVHGKQRIMCALTSIKGIGRRXANIVCKKADIDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVV 251 NTN+ G +RI ALT I+GIG R A +CK+ ID+ KRAGE+ E+ + + +P IP+ ++N Q+D DG S ++ Sbjct: 18 NTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMKRISDAILDPASVGIPESYMNHQRDIIDGTTSHLI 100 The following BLAST results are available for this feature:
BLAST of CK939311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939311 ID=CK939311; Name=CK939311; organism=Citrus sinensis; type=EST; length=255bpback to top |