CK939309

Overview
NameCK939309
Unique NameCK939309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length385
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9908 contig Csv1_Contig9908:222..606. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.344e-34
Identity = 65/122 (53.28%), Postives = 81/122 (66.39%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEELV +YL  +   R      I   D+Y+ +PWDLP ++    R  EWYFF+  D+KY NGSR NRA   GYWK TG D+PV HN RT G+KK LV++ G+ P G +T W+MH
Sbjct:   19 PGFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLPHRALFGRR--EWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMH 138          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.344e-34
Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEEL+ YYL+RK  ++ ++   I   DIYK +PWDLP  SS+   +KEWYFF M  +KY N  R NR T  G+WK TG D+PV+ N   VG+KK+LVY++G A  G +T+W+MH
Sbjct:   20 PGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVG--EKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMH 139          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.082e-33
Identity = 60/123 (48.78%), Postives = 90/123 (73.17%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDK-EWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPT+EEL++YYL++K  +  +  + I   D+ K EPWD+ +   + T  + +WYF+S  DKKY  G+RTNRAT  G+WK TG+D+ ++ N   +GM+KTLV++ GRAPHG++++W+MH
Sbjct:   13 PGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMH 135          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.413e-33
Identity = 62/122 (50.82%), Postives = 82/122 (67.21%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEEL+ YYL+ +   +P   + I   DIYK +PW LP+K+     + EWYFFS  ++KY NG R NRA   GYWK TG D+ +H  +  VG+KK LV++ GR P G +T+W+MH
Sbjct:   11 PGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFG--ENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMH 130          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 2.411e-33
Identity = 74/138 (53.62%), Postives = 87/138 (63.04%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDR-----PVHHNT-----------RTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTD E++  YL +K  +      PI   D+ K EPWDLP K+  K  +KEWYFFS  D KY  G RTNRAT++GYWK TGKDR     P   NT           + VGMKKTLV++MGRAP G +TNWVMH
Sbjct:   21 PGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKA--KMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMH 156          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.411e-33
Identity = 64/121 (52.89%), Postives = 84/121 (69.42%), Query Frame = 3
Query:   21 GFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            GFRFHPTDEELV++YL R+    P+    I   D+YK  PW+LP+ +     +KEWYFFS  D+KY NGSR NRA   GYWK TG D+P+    +T+G+KK LV++ G+AP G +TNW+MH
Sbjct:   53 GFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYG--EKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMH 170          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.148e-33
Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTD+ELV YYL RK    PL    I   D+YK  PWDLP+++     +KEWYFFS  D+KY NG R NRA   GYWK TG D+PV  + R V +KK LV++ G+ P G +TNW+MH
Sbjct:   11 PGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERA--MGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPV-GSPRAVAIKKALVFYAGKPPKGVKTNWIMH 129          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.148e-33
Identity = 60/123 (48.78%), Postives = 88/123 (71.54%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSL-KTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPT+EEL+ YYL++K   + +  + I   D+ K EPWD+ ++  +  T   +WYFFS  DKKY  G+RTNRAT  G+WK TG+D+ +    R +G++KTLV++ GRAPHG++++W+MH
Sbjct:   18 PGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRAPHGQKSDWIMH 140          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 7.014e-33
Identity = 66/122 (54.10%), Postives = 83/122 (68.03%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEELV +YL R+    P+    I   D+YK +PW LP  +     +KEWYFFS  D+KY NGSR NRA   GYWK TG D+PV  + + V +KK LV++ G+AP GE+TNW+MH
Sbjct:   11 PGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYG--EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV-GSPKPVAIKKALVFYAGKAPKGEKTNWIMH 129          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 7.014e-33
Identity = 67/124 (54.03%), Postives = 84/124 (67.74%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHH--NTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEEL+ +YL  K  H  L    I   D+ + EPW+LP+ +  K  ++EWYF+S+ D+KY  G RTNRAT  GYWK TGKD+ V      + VGMKKTLV++ GRAP G +T WVMH
Sbjct:   24 PGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMA--KMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMH 145          
The following BLAST results are available for this feature:
BLAST of CK939309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC67_ORYSJ6.344e-3453.28NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC42_ARATH6.344e-3454.10NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC66_ARATH1.082e-3348.78NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC29_ARATH1.413e-3350.82NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC77_ORYSJ2.411e-3353.62NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NA102_ARATH2.411e-3352.89NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC71_ORYSJ3.148e-3354.92NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC12_ARATH3.148e-3348.78NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC48_ORYSJ7.014e-3354.10NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC31_ARATH7.014e-3354.03Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004752_E02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IVF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939309 ID=CK939309; Name=CK939309; organism=Citrus sinensis; type=EST; length=385bp
CATCGACGTCGTAAGCTCCGGGGTTCCGATTTCACCCCACCGATGAGGAA
CTCGTTCGGTATTATTTGAAACGGAAGGATTGCCATAGACCGCTCCGGTT
CAACCCAATCTGCGTCACCGATATTTACAAGTCCGAGCCTTGGGACCTAC
CCGATAAGTCGAGTTTGAAAACTAGGGACAAGGAGTGGTATTTTTTTAGT
ATGTTGGATAAGAAGTATGGCAATGGGTCGAGGACCAATAGGGCCACTGA
AAAAGGATACTGGAAGACCACTGGGAAGGATCGCCCTGTTCATCATAATA
CGCGGACTGTTGGGATGAAGAAGACCCTTGTCTATCACATGGGGAGGGCT
CCTCATGGTGAACGTACCAATTGGGTGATGCATGA
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