CK939309

Overview
NameCK939309
Unique NameCK939309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length385
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9908 contig Csv1_Contig9908:222..606. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 9.160e-33
Identity = 65/122 (53.28%), Postives = 84/122 (68.85%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEELV +YL RK   + +    I   D+YK +PW+LP  +     +KEWYFFS  D+KY NGSR NR+   GYWK TG D+P+    + VG+KK LV++ G+AP GE+TNW+MH
Sbjct:    9 PGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYG--EKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI-GLPKPVGIKKALVFYAGKAPKGEKTNWIMH 127          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.196e-32
Identity = 66/126 (52.38%), Postives = 86/126 (68.25%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPV----HHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEELV +YLKRK    PL    I   D+YK +PW+LP K+S    ++EWYFFS  D+KY NG+R NRA   GYWK TG D+PV       ++ VG+KK LV++ G+ P G +++W+MH
Sbjct:   19 PGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASF--GEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMH 142          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 2.665e-32
Identity = 64/123 (52.03%), Postives = 82/123 (66.67%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICV-TDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHP D+ELV  YL R+  H   R   + +  D+ K EPWD+P  + +  +D  WYF+S  D+KY  G RTNRAT  GYWK TGKDR +    + VGM+KTLV++ GRAP G +T+WVMH
Sbjct:   21 PGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGKD--WYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMH 141          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.013e-31
Identity = 64/122 (52.46%), Postives = 80/122 (65.57%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRF+PTDEEL+  YL RK          I   D+YK +PWDLP K+     +KEWYFFS  D+KY NGSR NR    GYWK TG D+ +  + R VG+KK LV++ G+AP G +TNW+MH
Sbjct:   16 PGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFG--EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMH 135          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.013e-31
Identity = 63/122 (51.64%), Postives = 79/122 (64.75%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP K+     +KEWYFFS  D+KY NGSR NR    GYWK TG D+ +    R VG+KK LV+++G+AP G +TNW+MH
Sbjct:   16 PGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFG--EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMH 135          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.849e-31
Identity = 62/122 (50.82%), Postives = 80/122 (65.57%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP+K+     +KEWYFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV+++G+AP G +TNW+MH
Sbjct:   16 PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMH 135          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.914e-22
Identity = 54/126 (42.86%), Postives = 70/126 (55.56%), Query Frame = 3
Query:   21 GFRFHPTDEELVRYYLKRKDCHRPLRF--NPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPV---HHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            GFRF P DEE+V +YL+ K+           I   DI   EPWDLP KS +K+RD  WYFFS+ + KY  G +  R T  G+WK TGK   V     N   +G K+ LV+   +   G +T+WVMH
Sbjct:    6 GFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVF---KNRDGSKTDWVMH 128          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.117e-21
Identity = 54/126 (42.86%), Postives = 74/126 (58.73%), Query Frame = 3
Query:   21 GFRFHPTDEELVRYYLKRKDCHRP-LRFNPICVTDIYKSEPW-DLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHH---NTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            G+RF PT EE++ +YLK K   +  L    I   +I   +P  DLP  + +++ D EWYFFS ++    N  +  R T  G+WK TG DR +     N   +G+KKTLVYH G++PHG RT WVMH
Sbjct:    7 GYRFSPTGEEVINHYLKNKLLGKYWLVDEAISEINILSHKPSKDLPKLARIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMH 132          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC5_ARATH (NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 5.214e-20
Identity = 50/126 (39.68%), Postives = 67/126 (53.17%), Query Frame = 3
Query:   21 GFRFHPTDEELVRYYLKRKDCHRPLRF--NPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNT---RTVGMKKTLVYHMGRAPHGERTNWVMH 383
            GFRF PTD E+V  YL+ K+           I   DI   +PWDLP  S +KTRD+ WYFF   + KYG G R  R T+ G+WK TG    +   T     +G K+ LV+   +   G +++W MH
Sbjct:    6 GFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRDQVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVF---KNHGGSKSDWAMH 128          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.809e-20
Identity = 53/125 (42.40%), Postives = 67/125 (53.60%), Query Frame = 3
Query:   21 GFRFHPTDEELVRYYLKRKDCHRP-LRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPV---HHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            G+RF+PT EEL+ +YLK K   +  L    I   +I   +P  LP  S +K+ D  WYFF   +        T R T  GYWK TG DR +     N   +G+KKTLVY+ GR P G  T WVMH
Sbjct:    7 GYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMH 131          
The following BLAST results are available for this feature:
BLAST of CK939309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC2_ARATH9.160e-3353.28NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC18_ARATH1.196e-3252.38NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC22_ARATH2.665e-3252.03NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC72_ARATH1.013e-3152.46NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC55_ARATH1.013e-3151.64NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC19_ARATH3.849e-3150.82NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC4_ARATH1.914e-2242.86NAC domain-containing protein 4 OS=Arabidopsis tha... [more]
NAC68_ARATH2.117e-2142.86NAC domain-containing protein 68 OS=Arabidopsis th... [more]
NAC5_ARATH5.214e-2039.68NAC domain-containing protein 5 OS=Arabidopsis tha... [more]
NAC69_ARATH6.809e-2042.40NAC domain-containing protein 69 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004752_E02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IVF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939309 ID=CK939309; Name=CK939309; organism=Citrus sinensis; type=EST; length=385bp
CATCGACGTCGTAAGCTCCGGGGTTCCGATTTCACCCCACCGATGAGGAA
CTCGTTCGGTATTATTTGAAACGGAAGGATTGCCATAGACCGCTCCGGTT
CAACCCAATCTGCGTCACCGATATTTACAAGTCCGAGCCTTGGGACCTAC
CCGATAAGTCGAGTTTGAAAACTAGGGACAAGGAGTGGTATTTTTTTAGT
ATGTTGGATAAGAAGTATGGCAATGGGTCGAGGACCAATAGGGCCACTGA
AAAAGGATACTGGAAGACCACTGGGAAGGATCGCCCTGTTCATCATAATA
CGCGGACTGTTGGGATGAAGAAGACCCTTGTCTATCACATGGGGAGGGCT
CCTCATGGTGAACGTACCAATTGGGTGATGCATGA
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