CK939307

Overview
NameCK939307
Unique NameCK939307
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13395 contig Csv1_Contig13395:1..839. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939307 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.647e-36
Identity = 73/132 (55.30%), Postives = 93/132 (70.45%), Query Frame = 2
Query:  128 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPL 523
            ++LH + RVGDLDR+IKFY +  GM+LLR  + PE KY+ AFLG+   +S   +ELTYN+GV  Y+ GT +GH AI  +D+Y   E +RA GGNVTRE GPVKGG+T IAFV+DPDGY  E I+   T   L
Sbjct:    2 QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENKSTKSGL 133          

HSP 2 Score: 115.161 bits (287), Expect = 4.941e-25
Identity = 56/112 (50.00%), Postives = 73/112 (65.18%), Query Frame = 2
Query:  521 LCQVMLRVGDLGCSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGEITRQPGSIPGXNTKI 856
            +   MLRVGDL  SIKFY+  LGM+LLRT + PEYKYTLA LGY + +    +ELTYN+GV +Y  G AY  +AI  DD+Y + E V    +  GG +TR+ G + G +T I
Sbjct:    3 ILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAV----RASGGNVTREAGPVKGGSTVI 110          
BLAST of CK939307 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.409e-33
Identity = 62/125 (49.60%), Postives = 89/125 (71.20%), Query Frame = 2
Query:  128 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQR 502
            RLLH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          

HSP 2 Score: 97.8265 bits (242), Expect = 8.164e-20
Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 2
Query:  521 LCQVMLRVGDLGCSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGEITRQPGSIPGXNTKI 856
            L   MLRVG+L  S+ FY+  LGMKLLR  D PE ++TLA +GY +E  +TVLELT+N+    Y  GNAY  +A+  DD Y++ E V    +  GG + R+ G +    T I
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERV----KRQGGNVVREAGPMKHGTTVI 110          
BLAST of CK939307 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.409e-33
Identity = 62/125 (49.60%), Postives = 89/125 (71.20%), Query Frame = 2
Query:  128 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQR 502
            RLLH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          

HSP 2 Score: 97.8265 bits (242), Expect = 8.164e-20
Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 2
Query:  521 LCQVMLRVGDLGCSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGEITRQPGSIPGXNTKI 856
            L   MLRVG+L  S+ FY+  LGMKLLR  D PE ++TLA +GY +E  +TVLELT+N+    Y  GNAY  +A+  DD Y++ E V    +  GG + R+ G +    T I
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERV----KRQGGNVVREAGPMKHGTTVI 110          
BLAST of CK939307 vs. ExPASy Swiss-Prot
Match: LGUL_YEAST (Lactoylglutathione lyase OS=Saccharomyces cerevisiae GN=GLO1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.620e-26
Identity = 89/256 (34.77%), Postives = 120/256 (46.88%), Query Frame = 2
Query:  131 LLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE-------------QSHFVVELTYNYGV---TSYDIGT-------GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELI---------QRGPTPEPLCQVMLRVGDLGCSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYA--EEDQT----TVLELTYNYGVT-----EYTKGNA----YAQVAISTDD 757
            L H   RV D  RT+KFYTE FGMKLL ++D  E K+S  FL F  +              +H V+ELT+N+G      Y I         GFGH   +  D+ K  E + ++G    +     +G    IAF   PDGY  ELI          +G         M+R+ +   S++FY+  LGMKLLRT +    K+TL  LGY   + D      +VLELT+N+G        Y  GN+    Y  + IS DD
Sbjct:   23 LNHTCLRVKDPARTVKFYTEHFGMKLLSRKDFEEAKFSLYFLSFPKDDIPKNKNGEPDVFSAHGVLELTHNWGTEKNPDYKINNGNEEPHRGFGHICFSVSDINKTCEELESQGVKFKKRLS--EGRQKDIAFALGPDGYWIELITYSREGQEYPKGSVGNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNWGTENDPNFHYHNGNSEPQGYGHICISCDD 276          

HSP 2 Score: 73.559 bits (179), Expect = 1.649e-12
Identity = 46/139 (33.09%), Postives = 72/139 (51.80%), Query Frame = 2
Query:  137 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------HFVVELTYNYGVTS-----YDIGT----GFGHFAIATEDVYKLVENIRAK-GGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRG 505
            H + R+ +  R+++FY    GMKLLR  +    K++  FLG+G  ++        V+ELT+N+G  +     Y  G     G+GH  I+ +D   L + I  K G  +   P   +G   +IAF+KDPDGY  E++  G
Sbjct:  185 HTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNWGTENDPNFHYHNGNSEPQGYGHICISCDDAGALCKEIEVKYGDKIQWSPKFNQGRMKNIAFLKDPDGYSIEVVPHG 323          
BLAST of CK939307 vs. ExPASy Swiss-Prot
Match: LGUL_SCHPO (Lactoylglutathione lyase OS=Schizosaccharomyces pombe GN=glo1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.878e-24
Identity = 87/253 (34.39%), Postives = 125/253 (49.41%), Query Frame = 2
Query:  128 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--------GPEQS--HFVVELTYNYGVTS-----YDIGT-----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQV--------MLRVGDLGCSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE----DQTTVLELTYNYGVTE-----YTKGN-----AYAQVAISTDDV 760
            +L H + RV DLD+++KFYTE FGMKL+ +    E ++S +FL F        G E+S    ++ELTYN+G        Y  G      GFGH     +++      + +KG +  ++     G   HIAF  DPD Y  EL+ +  T +P   +        M+RV D   SI FYEK LGMK++   D P  K+T   L Y  +    D+  +LELT+N+G  +     Y  GN      Y  V IS D++
Sbjct:   11 KLNHTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAFDGPGALNHGVERSKREGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIESACAYLESKGVSFKKKLS--DGKMKHIAFALDPDNYWIELVSQSET-KPKANISNFRFNHTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAYPSDLPRHDREGLLELTHNWGTEKESGPVYHNGNDGDEKGYGHVCISVDNI 259          
BLAST of CK939307 vs. ExPASy Swiss-Prot
Match: GLOD4_RAT (Glyoxalase domain-containing protein 4 OS=Rattus norvegicus GN=Glod4 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.314e-21
Identity = 69/220 (31.36%), Postives = 107/220 (48.64%), Query Frame = 2
Query:  125 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGCSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS 748
            RR LH V++VG+  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFV ELTYNYG+  Y +G  F    +A+               N  R   P+      +   + P GY F L  R P+  +P+ +V L V DL  S+ ++   LGMK+    ++ ++    A+LGYA  D    LEL    G  +++   A+ ++A S
Sbjct:    4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGLTLASSQAV----------SNARRLEWPLSKVAEGVFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKKW----ALLGYA--DDQCKLELQGIQGAVDHSA--AFGRIAFS 205          
BLAST of CK939307 vs. ExPASy Swiss-Prot
Match: GLOD4_MOUSE (Glyoxalase domain-containing protein 4 OS=Mus musculus GN=Glod4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.392e-19
Identity = 68/220 (30.91%), Postives = 104/220 (47.27%), Query Frame = 2
Query:  125 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGCSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS 748
            RR LH V++V +  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFV ELTYNYG+  Y +G  F    +A+               N  +   P+      I   + P GY F L  R P+  +P+ +V L V DL  S+ ++   LGMK+    ++ +     A+LGYA  D    LEL    G  ++    A+ ++A S
Sbjct:    4 RRALHFVFKVKNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGITLASSQAV----------SNARKLEWPLSKVAEGIFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKQ----RALLGYA--DNQCKLELQGIQGAVDHAA--AFGRIAFS 205          
BLAST of CK939307 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEBR (Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.430e-18
Identity = 60/188 (31.91%), Postives = 96/188 (51.06%), Query Frame = 2
Query:  128 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGCSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE 658
            R LH V++V +  +TI FYT+   MK+LR  +             +E++S   +G+G E  HFV+ELTYNY +  Y++G  +    I ++ ++  +  I  +           K G   +A VKDPDG+ F++ +    P+ L +V L VGDL  S K++ + LGM ++      E K T   L + E
Sbjct:    4 RALHYVFKVANRAKTIDFYTKILEMKVLRHEEFDKGCEASCNGPYDERWSKTMIGYGSEDEHFVLELTYNYPIHKYELGNDYRAIVIDSDQLFDKISRIDHR-----------KSGCGRLA-VKDPDGHEFKIGKADHAPKVL-RVQLNVGDLEKSKKYWNELLGMGIV------EEKKTRVRLSFGE 172          
BLAST of CK939307 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEEL (Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.303e-17
Identity = 53/169 (31.36%), Postives = 91/169 (53.85%), Query Frame = 2
Query:  128 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGCSIKFYEKALGMKLL 601
            R LH V++V +  +TI F+T    MK+LR  +  +            ++S   +G+G E  HFV+E+TYNY +  Y++G  +    I ++ +++ VE I  +           K G   +A VKDPDG+ F++ +   +P+ L +V + VGDL  S K++ + LGM ++
Sbjct:    4 RALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYGSEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHR-----------KSGCGRLA-VKDPDGHEFKIGKADQSPKVL-RVQVNVGDLEKSKKYWNETLGMPIV 159          
BLAST of CK939307 vs. ExPASy Swiss-Prot
Match: GLOD4_HUMAN (Glyoxalase domain-containing protein 4 OS=Homo sapiens GN=GLOD4 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.193e-16
Identity = 72/235 (30.64%), Postives = 102/235 (43.40%), Query Frame = 2
Query:  125 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--------------------------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGCSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS 748
            RR LH V++VG+  +T +FY +  GMK+        E                          K+S   +GFGPE  HFV ELTYNYGV  Y +G  F    +A+               N  +   P+      +   + P GY F L  R  P  +P+ +V L V DL  S+ ++   LGMK+    +K E K   A+LGYA  D    LEL    G  ++    A+ ++A S
Sbjct:    4 RRALHFVFKVGNRFQTARFYRDVLGMKVESCSVARLECSGAISAHCSDYTRITEDSFSKPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAV----------SNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKI---YEKDEEKQR-ALLGYA--DNQCKLELQGVKGGVDHAA--AFGRIAFS 220          
The following BLAST results are available for this feature:
BLAST of CK939307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
LGUL_HAEIN3.647e-3655.30Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_NEIMB8.409e-3349.60Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA8.409e-3349.60Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_YEAST2.620e-2634.77Lactoylglutathione lyase OS=Saccharomyces cerevisi... [more]
LGUL_SCHPO1.878e-2434.39Lactoylglutathione lyase OS=Schizosaccharomyces po... [more]
GLOD4_RAT3.314e-2131.36Glyoxalase domain-containing protein 4 OS=Rattus n... [more]
GLOD4_MOUSE1.392e-1930.91Glyoxalase domain-containing protein 4 OS=Mus musc... [more]
GLOD4_CAEBR3.430e-1831.91Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 ... [more]
GLOD4_CAEEL1.303e-1731.36Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 P... [more]
GLOD4_HUMAN4.193e-1630.64Glyoxalase domain-containing protein 4 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004752_D12 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IVF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939307 ID=CK939307; Name=CK939307; organism=Citrus sinensis; type=EST; length=860bp
GGGGAGATCATATCTCACACTTGCGACTTCACTCCGACTTTCTGAGTGAT
TCCATATCAAAATGGCTGAGGCTTCTCCTGCTGCTGCTAATGCCGAGTTG
CTGGAATGGCCAAAGAAAGATAAGCGACGCCTCCTTCATGCTGTGTATCG
TGTTGGTGATCTTGATCGCACCATCAAATTTTACACCGAATGCTTTGGGA
TGAAGCTGTTGAGAAAGAGAGACGTCCCGGAAGAGAAATACTCAAATGCC
TTTCTTGGATTTGGCCCCGAACAGTCTCACTTTGTTGTGGAGTTAACGTA
CAACTATGGTGTAACTTCATATGATATTGGAACTGGTTTTGGCCATTTTG
CAATTGCAACTGAAGATGTTTACAAACTGGTTGAAAACATTCGTGCCAAG
GGTGGCAATGTCACTAGAGAGCCTGGTCCAGTTAAAGGTGGAACAACTCA
CATTGCCTTTGTGAAGGATCCCGATGGTTATATTTTTGAACTCATCCAGA
GAGGTCCAACTCCTGAACCACTCTGTCAAGTAATGCTTCGCGTTGGCGAT
CTTGGTTGCTCCATCAAGTTCTATGAAAAGGCTTTGGGGATGAAACTGTT
AAGGACAGTTGATAAACCTGAATACAAGTACACCCTGGCCATGCTTGGAT
ATGCTGAGGAAGATCAGACTACTGTTCTGGAGTTAACTTATAATTATGGT
GTGACTGAATATACCAAGGGAAATGCATATGCGCAGGTTGCTATTAGTAC
TGATGATGTATACAAAAGTGCTGAGGTTGTCAACCTGGTTACCCAAGAGC
TTGGAGGGGAGATAACTCGGCAACCCGGATCAATCCCTGGACNNAACACC
AAAATCACCT
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