CK939288

Overview
NameCK939288
Unique NameCK939288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCLE (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae GN=echA8 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.924e-17
Identity = 51/148 (34.46%), Postives = 78/148 (52.70%), Query Frame = 2
Query:  119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562
            NAL + M+  + +A + +  D     ++I  S PKVF+AGAD+KE   ++ ++   +     S +  L A+R P IA +              CDL I  + A  G PE  L ++PG GG+QRL R +GK+ A D+I TGR +   +A
Sbjct:   26 NALNSQMMNEITNAAKELDIDPDVGAILITGS-PKVFAAGADIKEMASLTFTDA--FDADFFSAWGKLAAVRTPMIAAVAGYALGGGCELAMMCDLLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTIDAAEA 170          
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: ECHM_DICDI (Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.947e-16
Identity = 51/148 (34.46%), Postives = 77/148 (52.03%), Query Frame = 2
Query:  119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562
            NAL   ++  +  A +   ED     ++I  S  K F+AGAD+KE  +++  +   Y N L + +  L  +R P IA ++             CD+ I GE A+ G PE  L  IPG GGTQRL R +GKS A +++ TG  ++  +A
Sbjct:   46 NALSDGLISEINSAVKLFQEDKDVGSIIITGS-EKAFAAGADIKEMEKVTLPDA--YNNDLLAQWHDLTKIRKPIIAAVNGYALGGGCELAMMCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNLTAVEA 190          
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: ECHM_BOVIN (Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.947e-16
Identity = 51/148 (34.46%), Postives = 77/148 (52.03%), Query Frame = 2
Query:  119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562
            NAL   ++  L  A +   ED +   +++     KVF+AGAD+KE + ++      Y     S +  L  ++ P IA ++             CD+   GE A  G PE  +  IPGAGGTQRL R VGKS+A +++ TG ++S +DA
Sbjct:   59 NALCNGLIVELNQALQAFEEDPAVGAIVLTGG-EKVFAAGADIKEMQSLTFQNC--YSGGFLSHWDQLTRVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDA 203          
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: ECHM_HUMAN (Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1 SV=4)

HSP 1 Score: 85.1149 bits (209), Expect = 2.543e-16
Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = 2
Query:  119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562
            NAL   ++  L  A +T  ED +   +++     K F+AGAD+KE + +S  +   Y +     +  L  ++ P IA ++             CD+   GE A    PE  +  IPGAGGTQRL R VGKS+A +++ TG ++S +DA
Sbjct:   59 NALCDGLIDELNQALKTFEEDPAVGAIVLTGG-DKAFAAGADIKEMQNLSFQDC--YSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDA 203          
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: PAAF_ECOLI (Probable enoyl-CoA hydratase paaF OS=Escherichia coli (strain K12) GN=paaF PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.322e-16
Identity = 53/150 (35.33%), Postives = 82/150 (54.67%), Query Frame = 2
Query:  116 KNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLR-STFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562
            +NAL   +L  L +  E  + D+S +V +I  +  + F+AGADL E   M+  ++   +N  R   ++ L+A   P IA ++             CD+ + GE A  GLPE  L I+PGAGGTQRL R VGKS+A  ++ +G  ++ + A
Sbjct:   23 RNALNNALLMQLVNELEAAATDTSISVCVITGNA-RFFAAGADLNE---MAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQA 168          
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_PECCP (Fatty acid oxidation complex subunit alpha OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.666e-16
Identity = 51/151 (33.77%), Postives = 74/151 (49.01%), Query Frame = 2
Query:  119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM-SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562
            N L ++  + +   FE   + ++   +++ SS P  F AGAD+    Q  S  +        + TF  + AL  P +A I              CD R+C   E  +LGLPE  L ++PG+GGTQRLPRL+G   A D+I TGR +    A
Sbjct:   39 NTLKSEFAQQILSVFEQARQHATLRGLILISSKPDSFIAGADITMLNQCRSAEQAENLAKQGQETFEQIAALPFPVVAAIHGACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGLLPGSGGTQRLPRLIGLDSALDLILTGRHLRANQA 189          
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCTU (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis GN=echA8 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.400e-16
Identity = 48/148 (32.43%), Postives = 77/148 (52.03%), Query Frame = 2
Query:  119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562
            NAL + ++  +  A   + +D     ++I  S  K F+AGAD+KE   ++ ++   +     +T+  L A+R PTIA +              CD+ I  + A  G PE  L ++PG GG+QRL R +GK+ A D+I TGR +   +A
Sbjct:   26 NALNSQVMNEVTSAATELDDDPDIGAIIITGSA-KAFAAGADIKEMADLTFADA--FTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEA 170          
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCBO (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis GN=echA8 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.400e-16
Identity = 48/148 (32.43%), Postives = 77/148 (52.03%), Query Frame = 2
Query:  119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562
            NAL + ++  +  A   + +D     ++I  S  K F+AGAD+KE   ++ ++   +     +T+  L A+R PTIA +              CD+ I  + A  G PE  L ++PG GG+QRL R +GK+ A D+I TGR +   +A
Sbjct:   26 NALNSQVMNEVTSAATELDDDPDIGAIIITGSA-KAFAAGADIKEMADLTFADA--FTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEA 170          
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: ECHM_PONAB (Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.664e-16
Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 2
Query:  119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562
            NAL   ++  L  A +   ED +   +++     K F+AGAD+KE + +S  +   Y +     +  L  ++ P IA ++             CD+   GE A    PE  +  IPGAGGTQRL R VGKS+A +++ TG ++S +DA
Sbjct:   59 NALCDGLIDELNQALKIFEEDPAVGAIVLTGG-DKAFAAGADIKEMQNLSFQDC--YSSKFLKHWDHLTQIKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRTVGKSLAMEMVLTGDRISAQDA 203          
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_ERWCT (Fatty acid oxidation complex subunit alpha OS=Erwinia carotovora subsp. atroseptica GN=fadB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.262e-15
Identity = 54/151 (35.76%), Postives = 80/151 (52.98%), Query Frame = 2
Query:  119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM--SPSE-IHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562
            N L T  +  L  A + ++E  +   +++RS  P  F  GAD+ E   +  +P+E +H ++    S F+ LE L +PT++ I+              D R+    A +GLPET L I+PG GGT RLPRL+G   A +II  G+ VS  DA
Sbjct:   29 NTLDTRTVASLGKALDVLAEQPNLKGLLLRSDKP-AFIVGADITEFLSLFAAPAEKLHEWLVFANSIFNRLEDLPVPTLSAINSYALGGGCECVLATDFRLATPDARIGLPETKLGIMPGFGGTVRLPRLLGADSALEIIAAGKDVSAADA 178          
The following BLAST results are available for this feature:
BLAST of CK939288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
ECHA8_MYCLE3.924e-1734.46Probable enoyl-CoA hydratase echA8 OS=Mycobacteriu... [more]
ECHM_DICDI1.947e-1634.46Probable enoyl-CoA hydratase, mitochondrial OS=Dic... [more]
ECHM_BOVIN1.947e-1634.46Enoyl-CoA hydratase, mitochondrial OS=Bos taurus G... [more]
ECHM_HUMAN2.543e-1633.78Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens... [more]
PAAF_ECOLI3.322e-1635.33Probable enoyl-CoA hydratase paaF OS=Escherichia c... [more]
FADJ_PECCP5.666e-1633.77Fatty acid oxidation complex subunit alpha OS=Pect... [more]
ECHA8_MYCTU7.400e-1632.43Probable enoyl-CoA hydratase echA8 OS=Mycobacteriu... [more]
ECHA8_MYCBO7.400e-1632.43Probable enoyl-CoA hydratase echA8 OS=Mycobacteriu... [more]
ECHM_PONAB9.664e-1633.11Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii... [more]
FADB_ERWCT1.262e-1535.76Fatty acid oxidation complex subunit alpha OS=Erwi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004752_F11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IVF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939288 ID=CK939288; Name=CK939288; organism=Citrus sinensis; type=EST; length=563bp
TGCCCTCCCAAATAACGAAAAAACCCATTGGGGCAAACCTTCCCAGCCAC
TTTTAAATTTATTAATCTCTGAAAATATTGTNNNNATCAACACTTCTCAG
TTTCATGAGTACCAAAAAAATGCGCTTGGAACGGATATGTTGAGAGGCTT
ATAGCATGCATTTGAAACTATCAGTGAGGATTCCTCTGCTAATGTTGTCA
TGATACGTAGCTCGGTTCCTAAAGTGTTCAGTGCTGGAGCTGATTTGAAG
GAACGCAGGCAAATGAGTCCATCTGAGATTCATTTTTATGTCAACACATT
GCGATCTACATTCTCCTTCTTAGAGGCACTTCGTATTCCAACCATTGCTG
TTATTGATGGAGCAGCATTGGGTGGTGGACTTGAAATGGCACTAGCATGT
GATCTTCGCATCTGTGGAGAAGCAGCACTATTGGGCTTGCCTGAAACAGG
ACTTGCTATAATTCCTGGGGCGGGTGGGACACAGCGGCTTCCAAGATTAG
TTGGAAAATCAGTAGCAAAAGATATTATATTTACTGGCCGCAAAGTTAGT
GGCAAAGATGCAA
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