CK939288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_YERP3 (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadJ PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 43/125 (34.40%), Postives = 63/125 (50.40%), Query Frame = 2 Query: 197 VMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 ++I S P F AGAD+ + + +S + + A +P +A I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 62 LVIVSGKPDSFIAGADITMIAACRTAHDARVLAQKGQSILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSKALDMILTGKQIRPRQA 186
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHEHH (Fatty acid oxidation complex subunit alpha OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadJ PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 45/137 (32.85%), Postives = 67/137 (48.91%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLRS----TFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I D+S +++ S F AGAD+ + E L F+ LE+L IP +A I+ C R+C ++G+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A Sbjct: 46 IKADTSIKGLVLVSGKKDSFVAGADIS---MLDACETATDAKQLSQQGHVVFNELESLPIPVVAAINGACLGGGLELALACHKRVCSLNPKTMMGVPEVQLGLLPGGGGTQRLPRLVGVTTALDMMLTGKQLRPKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SHEPW (Fatty acid oxidation complex subunit alpha OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=fadB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLRST---FSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGR 541 N + + L A ++I +++S +M+ S+ P F GAD+ E + E ++ L F+ LE L PTI+ I+ D R+ A +GLPET L IIPG GGT RLPR+VG A + I +G+ Sbjct: 29 NKFDRETIDSLNAALDSIKQNNSIKGLMLTSAKP-AFIVGADITEFLGLFAEEDAVLLSWLEEANVVFNKLEDLPFPTISAINGFALGAGCETILATDFRVADTTARIGLPETKLGIIPGFGGTVRLPRVVGTDNALEWITSGK 171
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SALTY (Fatty acid oxidation complex subunit alpha OS=Salmonella typhimurium GN=fadB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 45/151 (29.80%), Postives = 73/151 (48.34%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A E + + +++RS+ F GAD+ E + ++ +++ S F+ LE L +PT+A ++ D R+ +GLPET L I+PG GG+ RLPR++G A +II G+ V + A Sbjct: 29 NKLDTATVASLGQALEVLEKQHDLKGLLLRSN-KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SALTI (Fatty acid oxidation complex subunit alpha OS=Salmonella typhi GN=fadB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 45/151 (29.80%), Postives = 73/151 (48.34%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A E + + +++RS+ F GAD+ E + ++ +++ S F+ LE L +PT+A ++ D R+ +GLPET L I+PG GG+ RLPR++G A +II G+ V + A Sbjct: 29 NKLDTATVASLGQALEVLEKQHDLKGLLLRSN-KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SALPK (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A (strain AKU_12601) GN=fadB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 45/151 (29.80%), Postives = 73/151 (48.34%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A E + + +++RS+ F GAD+ E + ++ +++ S F+ LE L +PT+A ++ D R+ +GLPET L I+PG GG+ RLPR++G A +II G+ V + A Sbjct: 29 NKLDTATVASLGQALEVLEKQHDLKGLLLRSN-KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SALPB (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fadB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 45/151 (29.80%), Postives = 73/151 (48.34%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A E + + +++RS+ F GAD+ E + ++ +++ S F+ LE L +PT+A ++ D R+ +GLPET L I+PG GG+ RLPR++G A +II G+ V + A Sbjct: 29 NKLDTATVASLGQALEVLEKQHDLKGLLLRSN-KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SALPA (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A GN=fadB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 45/151 (29.80%), Postives = 73/151 (48.34%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A E + + +++RS+ F GAD+ E + ++ +++ S F+ LE L +PT+A ++ D R+ +GLPET L I+PG GG+ RLPR++G A +II G+ V + A Sbjct: 29 NKLDTATVASLGQALEVLEKQHDLKGLLLRSN-KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SALNS (Fatty acid oxidation complex subunit alpha OS=Salmonella newport (strain SL254) GN=fadB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 45/151 (29.80%), Postives = 73/151 (48.34%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A E + + +++RS+ F GAD+ E + ++ +++ S F+ LE L +PT+A ++ D R+ +GLPET L I+PG GG+ RLPR++G A +II G+ V + A Sbjct: 29 NKLDTATVASLGQALEVLEKQHDLKGLLLRSN-KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SALG2 (Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=fadB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 45/151 (29.80%), Postives = 73/151 (48.34%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A E + + +++RS+ F GAD+ E + ++ +++ S F+ LE L +PT+A ++ D R+ +GLPET L I+PG GG+ RLPR++G A +II G+ V + A Sbjct: 29 NKLDTATVASLGQALEVLEKQHDLKGLLLRSN-KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHA 178 The following BLAST results are available for this feature:
BLAST of CK939288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939288 ID=CK939288; Name=CK939288; organism=Citrus sinensis; type=EST; length=563bpback to top |