CK939288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_YERPA (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15 Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A + + S +++RS+ + GAD+ E + P ++H ++ + F+ LE L +PTI+ I+ D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA Sbjct: 29 NKLDTKTVANLGEALNVLEKQSELKGLLLRSAKTALI-VGADITEFLSLFNAPPEKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_YERP3 (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15 Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A + + S +++RS+ + GAD+ E + P ++H ++ + F+ LE L +PTI+ I+ D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA Sbjct: 29 NKLDTKTVANLGEALNVLEKQSELKGLLLRSAKTALI-VGADITEFLSLFNAPPEKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SERP5 (Fatty acid oxidation complex subunit alpha OS=Serratia proteamaculans (strain 568) GN=fadB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15 Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM--SPSE-IHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A + + + +++RS+ F GAD+ E + +P+E + ++N + F+ LE L +PTI+ I+ D R+ A +GLPET L I+PG GG+ RLPRL+G A +II G+ VS KDA Sbjct: 29 NKLDTRTVASLGEALAVLEKQTELKGLLLRST-KAAFIVGADITEFLSLFAAPAEKLQEWLNFANAIFNRLEDLPVPTISAINGYALGGGCECILATDFRVASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDVSAKDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: ECHM_CAEEL (Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis elegans GN=ech-6 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.380e-14 Identity = 49/149 (32.89%), Postives = 75/149 (50.34%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHF-YVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 NAL ++ L A E + D S ++I S + F+AGAD+KE M+ +E + + S ++ + ++ P IA ++ CD+ GE A G PE + IPGAGGTQR R GKS A ++ TG V+ ++A Sbjct: 57 NALCAQLMTELADALEVLDTDKSVGAIVITGS-ERAFAAGADIKE---MTNNEFATTFSGSFLSNWTAVSDVKKPVIAAVNGFALGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRWARAAGKSFAMEVCLTGNHVTAQEA 201
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: ECHH_RHIME (Probable enoyl-CoA hydratase OS=Rhizobium meliloti GN=fadB1 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.380e-14 Identity = 49/148 (33.11%), Postives = 71/148 (47.97%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 NAL ++R L A + D + +++ S K F+AGAD+KE + + + Y+ + + R P IA + CD I E A G PE L +IPG GG+QRL R VGK+ A D+I TGR + +A Sbjct: 26 NALNAVLMRELDAALKAFDADRAVGAIVLAGS-EKAFAAGADIKEMQGLD--FVDGYLADFLGGWEHVANARKPMIAAVSGFALGGGCELAMMCDFIIASETAKFGQPEITLGVIPGMGGSQRLTRAVGKAKAMDLILTGRMMDAAEA 170
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_CITK8 (Fatty acid oxidation complex subunit alpha OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.926e-14 Identity = 49/134 (36.57%), Postives = 69/134 (51.49%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQM-SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ P F AGAD+ S E + + ++AL +P +A I C RIC + A +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ K A Sbjct: 46 IRENKALRGVVFISAKPDNFIAGADINMIGNCKSAQEAETLARQGQQIMAEIQALSVPVVAAIHGACLGGGLEMALACHRRICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRPKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_VIBVY (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus (strain YJ016) GN=fadJ PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.046e-14 Identity = 57/178 (32.02%), Postives = 83/178 (46.63%), Query Frame = 2 Query: 44 QPLLNLLISE-NIVXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLK--ERRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 Q NL I E NI + +E + N L + F + + S +++ S P F AGAD++ E + +P E + F L L P +A I CD R+C + A LGLPE L ++PG+GGTQRLPRL+G + D+I TG+++ K A Sbjct: 4 QKAFNLKIDEQNIAWLGIDVPNE-KMNTLQAAFADEMKAIFAQLKDSSGLKGLIVHSLKPDNFVAGADVRMLEACKTAP-EAEALARQGQELFQQLSDLPYPVVAAIHGPCLGGGLELALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHEFN (Fatty acid oxidation complex subunit alpha OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadJ PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.046e-14 Identity = 49/137 (35.77%), Postives = 68/137 (49.64%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSEIHFYVNTLRS----TFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I DSS +++ S F AGAD+ E TL F+ LE L IP +A I+ C LR+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A Sbjct: 46 IKADSSIKGLVVISGKADSFVAGADITMLAACKNEE---QAKTLSQQGHVVFAELEGLSIPVVAAINGACLGGGLELALACHLRVCSDDKKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_PHOLL (Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii GN=fadB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.181e-13 Identity = 50/151 (33.11%), Postives = 76/151 (50.33%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM--SPSE-IHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A ++ + + V++RS F GAD+ E + SP E + ++N S F+ +E L +PTI+ I+ D R+ +GLPET L I+PG GG+ RLPRL+G A DII G+ + ++A Sbjct: 29 NKLDTKTVASLDKAIASLEQQTGLKGVLLRSE-KTAFIVGADITEFLSLFDSPVEKLQEWLNFSNSIFNRIEDLPVPTISAINGYALGGGCECVLSTDFRVASPDIRIGLPETKLGIMPGFGGSVRLPRLIGTDNALDIIAAGKDIGAEEA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_ALISL (Fatty acid oxidation complex subunit alpha OS=Aliivibrio salmonicida (strain LFI1238) GN=fadB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.543e-13 Identity = 49/151 (32.45%), Postives = 74/151 (49.01%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS---EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L LR L A + + + +++ SS F GAD+ E + + E+ +++ FS LE L +PT++ I D R+ + A +GLPET L I+PG GG+ RLPRL+G A ++I TG+ KDA Sbjct: 29 NKLNIATLRSLGEAIDVLYKQKDLQALLL-SSGKSAFIVGADITEFLGLFDTPEEELSDWLHQANVIFSRLEDLPVPTLSAITGFALGGGCECVLATDFRLADDTASIGLPETQLGIMPGWGGSVRLPRLIGADPAMEVITTGKPKRAKDA 178 The following BLAST results are available for this feature:
BLAST of CK939288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939288 ID=CK939288; Name=CK939288; organism=Citrus sinensis; type=EST; length=563bpback to top |