CK939288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHEAM (Fatty acid oxidation complex subunit alpha OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadJ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.015e-13 Identity = 46/136 (33.82%), Postives = 68/136 (50.00%), Query Frame = 2 Query: 164 ETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSE-IHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + I DSS +++ S F AGAD+ +E F+ LE L IP +A I C R+C +++ +LG+PE L ++PG GGTQRLPRL+G + A D++ TG++V K A Sbjct: 42 QEIKADSSIKGLVLISGKADSFVAGADISMLDACETAEDARLLSRQGHHVFAELEGLNIPVVAAIHGACLGGGLELALACHQRVCSDSSKTMLGVPEVQLGLLPGGGGTQRLPRLIGIAKALDLMLTGKQVRPKQA 177
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_KLEP3 (Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae (strain 342) GN=fadJ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.015e-13 Identity = 51/146 (34.93%), Postives = 70/146 (47.95%), Query Frame = 2 Query: 134 DMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKE-RRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + +RGL + +D S V+ S+ F AGAD+ R S E + + + L IP IA I C RIC E LGLPE L ++PG+GGTQRLPRL+G S A D++ TGR++ + A Sbjct: 37 NQVRGL---IRQVRDDKSVRGVVFISAKTDNFIAGADINMIARCRSAQEAEALARQGQQIMAEIHGLSIPVIAAIHGACLGGGLELALACHGRICSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGRQLRARQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHESR (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-7) GN=fadJ PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13 Identity = 53/172 (30.81%), Postives = 77/172 (44.77%), Query Frame = 2 Query: 56 NLLISENIVXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 NL E+ + I T N L + + I DSS +++ S F AGAD+ + + F+ LEAL IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A Sbjct: 6 NLTRREDGIAILTMDVPGETMNTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQA 177
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHESM (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-4) GN=fadJ PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13 Identity = 53/172 (30.81%), Postives = 77/172 (44.77%), Query Frame = 2 Query: 56 NLLISENIVXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 NL E+ + I T N L + + I DSS +++ S F AGAD+ + + F+ LEAL IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A Sbjct: 6 NLTRREDGIAILTMDVPGETMNTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQA 177
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHEON (Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis GN=fadJ PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13 Identity = 53/172 (30.81%), Postives = 77/172 (44.77%), Query Frame = 2 Query: 56 NLLISENIVXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 NL E+ + I T N L + + I DSS +++ S F AGAD+ + + F+ LEAL IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A Sbjct: 8 NLTRREDGIAILTMDVPGETMNTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_VIBVU (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus GN=fadJ PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13 Identity = 56/178 (31.46%), Postives = 82/178 (46.07%), Query Frame = 2 Query: 44 QPLLNLLISE-NIVXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLK--ERRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 Q NL I E NI + +E + N L + F + + S +++ S P F AGAD++ E + +P E + F L L P +A I CD R+C + A LGLPE L ++PG+GGTQRLPRL+G + D+I TG+++ A Sbjct: 4 QKAFNLKIDEQNIAWLGIDVPNE-KMNTLQAAFADEMKAIFAQLKDSSGLKGLIVHSLKPDNFVAGADVRMLEACKTAP-EAEALARQGQELFQQLSDLPYPVVAAIHGPCLGGGLELALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRANKA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_VIBHB (Fatty acid oxidation complex subunit alpha OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=fadJ PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13 Identity = 46/137 (33.58%), Postives = 67/137 (48.91%), Query Frame = 2 Query: 161 FETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSP-SEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEA--ALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 F + + S ++I S P F AGAD++ + SE + F L L P +A I CD R+C ++ LGLPE L ++PG+GGTQRLPRL+G + D+I TG+++ K A Sbjct: 43 FAQLKDTSGVKGMVIHSLKPDNFVAGADVRMLEACTTASEAEALAKQGQELFQQLSDLPYPVVAAIHGPCLGGGLELALACDYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHEB8 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS185) GN=fadJ PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13 Identity = 47/134 (35.07%), Postives = 66/134 (49.25%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I DSS +++ S F AGAD+ + + F+ LEAL IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+K+ K A Sbjct: 44 IKSDSSIRGLVLISGKKDSFVAGADISMLDACKTAGDAKALSQQGHVVFNELEALTIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKKIRPKQA 177
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_ENTS8 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.489e-13 Identity = 47/151 (31.13%), Postives = 74/151 (49.01%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERR---QMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L HA + + + +++RS F GAD+ E Q+ ++ +++ S F+ LE L +PT+ I+ D R+ A +GLPET L I+PG GG+ RLPRL+G A +II G+ ++ A Sbjct: 29 NKLDTATVASLGHALDVLEKQHDLKALLLRSE-KAAFIVGADITEFLSLFQVPAEQLSQWLHFANSVFNRLEDLPVPTLCAINGYALGGGCECVLATDFRLATPDARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDITADAA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHESA (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain ANA-3) GN=fadJ PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.863e-13 Identity = 46/134 (34.33%), Postives = 66/134 (49.25%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I DSS +++ S F AGAD+ + + F+ LEAL IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A Sbjct: 44 IKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQA 177 The following BLAST results are available for this feature:
BLAST of CK939288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939288 ID=CK939288; Name=CK939288; organism=Citrus sinensis; type=EST; length=563bpback to top |