CK939288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_KLEP7 (Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12 Identity = 50/144 (34.72%), Postives = 69/144 (47.92%), Query Frame = 2 Query: 140 LRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKE-RRQMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 +RGL + +D S V+ S+ F AGAD+ R S E + + + L IP IA I C RIC E LGLPE L ++PG+GGTQRLPRL+G S A D++ TG+++ + A Sbjct: 39 VRGL---IRQLRDDKSVRGVVFISAKADNFIAGADINMIARCRSAQEAEALARQGQQIMAEIHGLSIPVIAAIHGACLGGGLELALACHGRICSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SHEB8 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS185) GN=fadB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12 Identity = 50/151 (33.11%), Postives = 72/151 (47.68%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSE---IHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N + L L A ++I +DS+ +++ SS F GAD+ E + + + +V + F+ LE L PT + I D RI A +GLPET L IIPG GGT RLPR++G A + I TG+ +DA Sbjct: 29 NKFDRETLASLDAALDSIKQDSNIKALVLTSS-KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRAEDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SHEB5 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12 Identity = 50/151 (33.11%), Postives = 72/151 (47.68%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSE---IHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N + L L A ++I +DS+ +++ SS F GAD+ E + + + +V + F+ LE L PT + I D RI A +GLPET L IIPG GGT RLPR++G A + I TG+ +DA Sbjct: 29 NKFDRETLTSLDAALDSIKQDSNIKALVLTSS-KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRAEDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SHEB2 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS223) GN=fadB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12 Identity = 50/151 (33.11%), Postives = 72/151 (47.68%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSE---IHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N + L L A ++I +DS+ +++ SS F GAD+ E + + + +V + F+ LE L PT + I D RI A +GLPET L IIPG GGT RLPR++G A + I TG+ +DA Sbjct: 29 NKFDRETLASLDAALDSIKQDSNIKALVLTSS-KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILTTDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRAEDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_KLEP7 (Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12 Identity = 47/151 (31.13%), Postives = 73/151 (48.34%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L HA + + + S +++RS F GAD+ E + ++ +++ S F+ LE L +PTI+ ++ D R+ +GLPET L I+PG GG+ RLPRL+G A +II G+ V A Sbjct: 29 NKLDTATVASLGHALDVLEKQSDLKGLLLRSE-KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVGADQA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_ENT38 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sp. (strain 638) GN=fadB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12 Identity = 46/151 (30.46%), Postives = 74/151 (49.01%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERR---QMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L HA + + + S +++RS F GAD+ E Q+ ++ +++ S F+ LE L +PTI+ ++ D R+ +GLPET L I+PG GG+ R+PR++G A +II G+ V A Sbjct: 29 NKLDTATVASLGHALDVLEKQSDLKGLLLRSE-KAAFIVGADITEFLSLFQVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHESW (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain W3-18-1) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12 Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 2 Query: 311 FSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 F+ LEAL+IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A Sbjct: 92 FNELEALKIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRSKQA 177
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SERP5 (Fatty acid oxidation complex subunit alpha OS=Serratia proteamaculans (strain 568) GN=fadJ PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12 Identity = 43/125 (34.40%), Postives = 64/125 (51.20%), Query Frame = 2 Query: 197 VMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 ++I S P F AGAD+ + + E +ST + + A ++P +A I C R+C + LGLPE L ++PG+GGTQRLPRL+G S A D+I TG+ + + A Sbjct: 59 LVIVSGKPDSFIAGADITMIAACTTAKEAETLAKKGQSTLAQIAAFQVPVVAAIHGACLGGGLELALACHGRVCSLDDKTALGLPEVQLGLLPGSGGTQRLPRLIGASKALDMILTGKHIRARQA 183
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_VIBFM (Fatty acid oxidation complex subunit alpha OS=Vibrio fischeri (strain MJ11) GN=fadB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12 Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 2 Query: 200 MIRSSVPKVFSAGADLKERR---QMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 ++ SS F GAD+ E + E+ +++ + F+ LE + +PT++ I D R+ E A +GLPET L I+PG GG+ RLPRL+G A ++I TG+ KDA Sbjct: 55 LLLSSDKSAFIVGADITEFLGLFDIPTEELSDWLHQANAIFNRLEDIPVPTLSAITGFALGGGCECVLATDFRLADETASIGLPETQLGIMPGWGGSVRLPRLIGADPAMEVITTGKPKRAKDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_VIBF1 (Fatty acid oxidation complex subunit alpha OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12 Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 2 Query: 200 MIRSSVPKVFSAGADLKERR---QMSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 ++ SS F GAD+ E + E+ +++ + F+ LE + +PT++ I D R+ E A +GLPET L I+PG GG+ RLPRL+G A ++I TG+ KDA Sbjct: 55 LLLSSDKSAFIVGADITEFLGLFDIPTEELSDWLHQANAIFNRLEDIPVPTLSAITGFALGGGCECVLATDFRLADETASIGLPETQLGIMPGWGGSVRLPRLIGADPAMEVITTGKPKRAKDA 178 The following BLAST results are available for this feature:
BLAST of CK939288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939288 ID=CK939288; Name=CK939288; organism=Citrus sinensis; type=EST; length=563bpback to top |