CK939288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_ECOHS (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O9:H4 (strain HS) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 49/164 (29.88%), Postives = 76/164 (46.34%), Query Frame = 2 Query: 80 VXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + I T + + N L + + + + E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 16 IAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_ECO7I (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 45/134 (33.58%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + E+ V+ S+ P F AGAD+ + E + + + AL +P IA I C R+C + A +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 46 LRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_ECO45 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 46/134 (34.33%), Postives = 66/134 (49.25%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 46 IRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_ECO27 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 46/134 (34.33%), Postives = 66/134 (49.25%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 46 IRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHEPC (Fatty acid oxidation complex subunit alpha OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 2 Query: 311 FSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 F+ LEAL+IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A Sbjct: 92 FNELEALKIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQA 177
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SALTY (Fatty acid oxidation complex subunit alpha OS=Salmonella typhimurium GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ F AGAD+ + E + + ++AL +P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SALTI (Fatty acid oxidation complex subunit alpha OS=Salmonella typhi GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ F AGAD+ + E + + ++AL +P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SALSV (Fatty acid oxidation complex subunit alpha OS=Salmonella schwarzengrund (strain CVM19633) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ F AGAD+ + E + + ++AL +P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SALPB (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ F AGAD+ + E + + ++AL +P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SALNS (Fatty acid oxidation complex subunit alpha OS=Salmonella newport (strain SL254) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ F AGAD+ + E + + ++AL +P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQA 179 The following BLAST results are available for this feature:
BLAST of CK939288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939288 ID=CK939288; Name=CK939288; organism=Citrus sinensis; type=EST; length=563bpback to top |