CK939288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SALHS (Fatty acid oxidation complex subunit alpha OS=Salmonella heidelberg (strain SL476) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ F AGAD+ + E + + ++AL +P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SALG2 (Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ F AGAD+ + E + + ++AL +P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SALEP (Fatty acid oxidation complex subunit alpha OS=Salmonella enteritidis PT4 (strain P125109) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ F AGAD+ + E + + ++AL +P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SALDC (Fatty acid oxidation complex subunit alpha OS=Salmonella dublin (strain CT_02021853) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ F AGAD+ + E + + ++AL +P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SALCH (Fatty acid oxidation complex subunit alpha OS=Salmonella choleraesuis GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ F AGAD+ + E + + ++AL +P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SALA4 (Fatty acid oxidation complex subunit alpha OS=Salmonella agona (strain SL483) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ + V+ S+ F AGAD+ + E + + ++AL +P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_KLEP3 (Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae (strain 342) GN=fadB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12 Identity = 46/151 (30.46%), Postives = 73/151 (48.34%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L HA + + + + +++RS F GAD+ E + ++ +++ S F+ LE L +PTI+ ++ D R+ +GLPET L I+PG GG+ RLPRL+G A +II G+ V A Sbjct: 29 NKLDTATVASLGHALDVLEKQNDLKGLLLRSE-KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVGADQA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_ECOL5 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12 Identity = 45/134 (33.58%), Postives = 66/134 (49.25%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 46 LRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_ECO81 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81 (strain ED1a) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12 Identity = 45/134 (33.58%), Postives = 66/134 (49.25%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 46 LRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_VIBVY (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus (strain YJ016) GN=fadB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12 Identity = 49/151 (32.45%), Postives = 72/151 (47.68%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L L L A + ++ S VM+ S + F GAD+ E + E+ ++ S F+ LE L +PT+AV+ DLRI + +GLPET L I+PG GG RLPR++G A +II G+ ++A Sbjct: 29 NKLDLATLASLDKALDALTAHSGLKGVMLTSD-KEAFIVGADITEFLGLFAKPEEELDQWLQFANSIFNKLEDLPVPTVAVVKGHTLGGGCECVLATDLRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRAEEA 178 The following BLAST results are available for this feature:
BLAST of CK939288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939288 ID=CK939288; Name=CK939288; organism=Citrus sinensis; type=EST; length=563bpback to top |