CK939284

Overview
NameCK939284
Unique NameCK939284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2171 contig Csv1_Contig2171:1..650. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939284 vs. ExPASy Swiss-Prot
Match: CYC_SESIN (Cytochrome c OS=Sesamum indicum PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.332e-54
Identity = 99/111 (89.19%), Postives = 106/111 (95.50%), Query Frame = 2
Query:   32 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 364
            ASF++APPG+ K+GEKIFKTKCAQCHTV KGAGHKQGPNLNGLFGRQSGTTPGYSYSAANK MAVIW E TLY+YLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKE+TA
Sbjct:    1 ASFBZAPPGBVKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATA 111          
BLAST of CK939284 vs. ExPASy Swiss-Prot
Match: CYC_CANSA (Cytochrome c OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.740e-54
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 2
Query:   32 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 364
            ASF++APPG+ KAGEKIFKTKCA+CHTV +GAGHKQGPNLNGLFGRQSGTT GYSYSAANK MAV W++KTLY+YLLNPKKYIPGTKMVFPGLKKP++RADLIAYLKESTA
Sbjct:    1 ASFBZAPPGBSKAGEKIFKTKCAECHTVGRGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVTWZZKTLYDYLLNPKKYIPGTKMVFPGLKKPZBRADLIAYLKESTA 111          
BLAST of CK939284 vs. ExPASy Swiss-Prot
Match: CYC2_ARATH (Probable cytochrome c At1g22840 OS=Arabidopsis thaliana GN=At1g22840 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.273e-54
Identity = 101/112 (90.18%), Postives = 104/112 (92.86%), Query Frame = 2
Query:   29 MASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 364
            MASF+EAPPGN KAGEKIF+TKCAQCHTV  GAGHKQGPNLNGLFGRQSGTT GYSYSAANK  AV WEEK LY+YLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct:    1 MASFDEAPPGNAKAGEKIFRTKCAQCHTVEAGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVEWEEKALYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112          
BLAST of CK939284 vs. ExPASy Swiss-Prot
Match: CYC_SOLLC (Cytochrome c OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.968e-54
Identity = 100/111 (90.09%), Postives = 104/111 (93.69%), Query Frame = 2
Query:   32 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 364
            ASF EAPPGNPKAGEKIFKTKCAQCHTV KGAGHK+GPNLNGLFGRQSGTT GYSYSAANK MAV W E TLY+YLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKE+TA
Sbjct:    1 ASFNEAPPGNPKAGEKIFKTKCAQCHTVEKGAGHKEGPNLNGLFGRQSGTTAGYSYSAANKNMAVNWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATA 111          
BLAST of CK939284 vs. ExPASy Swiss-Prot
Match: CYC_GOSBA (Cytochrome c OS=Gossypium barbadense PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.877e-54
Identity = 99/111 (89.19%), Postives = 104/111 (93.69%), Query Frame = 2
Query:   32 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 364
            ASF++APPG+ KAGEKIFKTKCAQCHTV KGAGHKQGPNLNGLFGRQSGTT GYSYSAANK MAV W E TLY+YLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK+STA
Sbjct:    1 ASFQZAPPGBAKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVQWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKZSTA 111          
BLAST of CK939284 vs. ExPASy Swiss-Prot
Match: CYC_MAIZE (Cytochrome c OS=Zea mays PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.063e-54
Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 2
Query:   32 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 364
            ASF EAPPGNPKAGEKIFKTKCAQCHTV KGAGHKQGPNLNGLFGRQSGTT GYSYSAANK  AV+WEE TLY+YLLNP KYIPGTKMVFPGL KPQ+RADLIAYLKE+TA
Sbjct:    1 ASFSEAPPGNPKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVVWEENTLYDYLLNPXKYIPGTKMVFPGLXKPQERADLIAYLKEATA 111          
BLAST of CK939284 vs. ExPASy Swiss-Prot
Match: CYC_RICCO (Cytochrome c OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.128e-53
Identity = 98/111 (88.29%), Postives = 104/111 (93.69%), Query Frame = 2
Query:   32 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 364
            ASF++APPG+ KAGEKIFKTKCAQCHTV KGAGHKQGPNLNGLFGRQSGTT GYSYSAANK MAV W E TLY+YLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK++TA
Sbjct:    1 ASFBZAPPGBVKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVQWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKZATA 111          
BLAST of CK939284 vs. ExPASy Swiss-Prot
Match: CYC_SOLTU (Cytochrome c OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.924e-53
Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 2
Query:   32 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 364
            ASF EAPPGNPKAGEKIFKTKCAQCHTV KGAGHK+GPNLNGLFGRQSGTT GYSYS ANK MAV W E TLY+YLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKE+TA
Sbjct:    1 ASFGEAPPGNPKAGEKIFKTKCAQCHTVDKGAGHKEGPNLNGLFGRQSGTTAGYSYSNANKNMAVTWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATA 111          
BLAST of CK939284 vs. ExPASy Swiss-Prot
Match: CYC_ALLPO (Cytochrome c OS=Allium porrum PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.924e-53
Identity = 95/111 (85.59%), Postives = 103/111 (92.79%), Query Frame = 2
Query:   32 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 364
            A+F +APPG+ KAG+KIFK KCAQCHTV KGAGHKQGPNLNGLFGRQSGT  GYSYSAANK MAV+W++ TLY+YLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct:    1 ATFSZAPPGBZKAGQKIFKLKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTAAGYSYSAANKNMAVVWZZBTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 111          
BLAST of CK939284 vs. ExPASy Swiss-Prot
Match: CYC_ACENE (Cytochrome c OS=Acer negundo PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.513e-53
Identity = 100/111 (90.09%), Postives = 102/111 (91.89%), Query Frame = 2
Query:   32 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 364
            ASF EAPPGNP AGEKIFKTKCAQCHTV KGAGHKQGPNLNGLFGRQSGTT GYSYSAANK MAV W   TLY+YLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK+STA
Sbjct:    1 ASFAEAPPGNPAAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVNWGYNTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 111          
The following BLAST results are available for this feature:
BLAST of CK939284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
CYC_SESIN1.332e-5489.19Cytochrome c OS=Sesamum indicum PE=1 SV=1[more]
CYC_CANSA1.740e-5486.49Cytochrome c OS=Cannabis sativa PE=1 SV=1[more]
CYC2_ARATH2.273e-5490.18Probable cytochrome c At1g22840 OS=Arabidopsis tha... [more]
CYC_SOLLC2.968e-5490.09Cytochrome c OS=Solanum lycopersicum PE=1 SV=2[more]
CYC_GOSBA3.877e-5489.19Cytochrome c OS=Gossypium barbadense PE=1 SV=1[more]
CYC_MAIZE5.063e-5489.19Cytochrome c OS=Zea mays PE=1 SV=1[more]
CYC_RICCO1.128e-5388.29Cytochrome c OS=Ricinus communis PE=1 SV=1[more]
CYC_SOLTU1.924e-5389.19Cytochrome c OS=Solanum tuberosum PE=1 SV=1[more]
CYC_ALLPO1.924e-5385.59Cytochrome c OS=Allium porrum PE=1 SV=1[more]
CYC_ACENE2.513e-5390.09Cytochrome c OS=Acer negundo PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004752_G05 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IVF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939284 ID=CK939284; Name=CK939284; organism=Citrus sinensis; type=EST; length=730bp
GGGGAATTCGATTTTAACCACAATCAAAATGGCGTCGTTTGAGGAAGCTC
CACCTGGTAATCCAAAGGCCGGGGAGAAAATCTTCAAGACCAAGTGCGCT
CAGTGCCACACCGTCGTGAAAGGCGCTGGTCACAAACAAGGACCAAATTT
GAATGGACTTTTCGGGAGACAGTCCGGGACAACTCCCGGGTACTCCTATT
CAGCTGCTAACAAGGGTATGGCTGTTATTTGGGAAGAGAAAACGTTGTAC
AATTACTTGCTTAACCCCAAGAAGTATATTCCTGGAACAAAGATGGTCTT
CCCTGGATTGAAGAAGCCTCAGGATCGTGCAGACCTCATTGCCTATTTGA
AGGAGTCAACAGCCTGATTTTTGCTTAGTGTGGGCTATTTTGCAACCATG
GGAAGAGTATGGTCCCTGATGATTCAATAATTTTTTGTTTTTGGAAGAAA
AAATGTTGTTCAAATGAGAATGTTCAAAATGTTTTACTCTTTTTAGCCAT
AGACAATTGGATAAAATGTTCTTCCAAAGAAACTTTTCTTTGAGAGGCAT
TTCGCANATTTTGATGATTNNNAAGCGCTATGTATCCTAATTTTGCCACT
TAATTTGTTATAATGGAATTTTAAGTTGCATATTCTTCTTTGAGTGGACT
TTCTTGGATTCAAAGATGTCATTACATTTGGATATGAAATTTAAGTTTTT
TGTGTAAAAAAAAAAAAAAAAAAAAAAAAN
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