CX675648

Overview
NameCX675648
Unique NameCX675648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIPG_MOUSE (Gastric triacylglycerol lipase OS=Mus musculus GN=Lipf PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.517e-15
Identity = 48/152 (31.58%), Postives = 82/152 (53.95%), Query Frame = -2
Query:  160 ICQKPGVD--CTNLLNSFTG-QNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 606
            +C +  +D  C+N L  F G     LN S  DV+L H P  TST+++ H AQ+ + G +  Y++ +  +N  HY Q  PP Y+++++   +P+ +  GG D L+D  DV +LL  L +    K ++ Y     H D++   +A Q +Y  ++
Sbjct:  244 VCSRELLDLLCSNALFIFCGFDKKNLNVSRFDVYLGHNPAGTSTQDLFHWAQLAKSGKLQAYNWGSPLQNMLHYNQKTPPYYDVSAM--TVPIAVWNGGHDILADPQDVAMLLPKLPNLLYHKEILPYN----HLDFIWAMDAPQEVYNEIV 389          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LICH_RAT (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus GN=Lipa PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.227e-14
Identity = 52/171 (30.41%), Postives = 86/171 (50.29%), Query Frame = -2
Query:  148 EFDPRGEAVVKLLKNICQKPGVD--CTNLLNSFTGQN-CCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 651
            +F P+   V  L  +IC    +   C N+     G N   LN S VDV+  H P  TS +NM+H  Q+++   +  +D+ + ++N  HY Q  PPLY++  +   LP  L  GG D L+D +D+ +LL  +      K +     ++ H D++ G +A   LY  +++  K
Sbjct:  230 QFLPQSAMVKWLSTHICTHVIMKELCANIFFLICGFNEKNLNMSRVDVYTTHCPAGTSVQNMVHWTQVVKYHKLQAFDWGSSDKNYFHYNQSYPPLYSIKDM--QLPTALWSGGKDWLADTSDINILLTEIPTLVYHKNI----PEWDHLDFIWGLDAPWRLYNEVVSLMK 394          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LICH_MOUSE (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Mus musculus GN=Lipa PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.230e-13
Identity = 50/149 (33.56%), Postives = 78/149 (52.35%), Query Frame = -2
Query:  148 CTN---LLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYR-QDYAHADYVMGENAGQVLYEPLMAFFK 582
            C N   LL  F  +N  LN S VDV+  H P     +NM+H  Q+ +   +  +D+ + E+N  HY Q  PP YN+ ++   LP  L  GG D L+D+ND+ +LL  +      KLV      ++ H D++ G +A   LY+ +++  K
Sbjct:  255 CANVFFLLCGFNEKN--LNMSRVDVYTTHCPAELLVQNMLHWGQVFKYRKLQAFDWGSSEKNYFHYNQSFPPSYNIKNM--RLPTALWSGGRDWLADINDITILLTQI-----PKLVYHKNIPEWDHLDFIWGLDAPWKLYDEIISLMK 394          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LICH_MACFA (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Macaca fascicularis GN=LIPA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12
Identity = 51/160 (31.87%), Postives = 80/160 (50.00%), Query Frame = -2
Query:  148 LLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLND---HEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 618
            +LK +C   G  C  LL  F  +N  LN S VDV+  H P  TS +NM+H +Q ++      +D+ +  +N  HY Q  PP YN+  +   +P  +  GG D L+DV D+ +LL  + +   HE          ++ H D++ G +A   LY  ++   K
Sbjct:  252 ILKELC---GNLCF-LLCGFNERN--LNMSRVDVYTTHSPAGTSVQNMLHWSQAVKFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDML--VPTAVWSGGHDWLADVYDINILLTQITNLVFHES-------IPEWEHLDFIWGLDAPWRLYNKIINLMK 396          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIPJ_HUMAN (Lipase member J OS=Homo sapiens GN=LIPJ PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.776e-12
Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = -2
Query:  160 CTNLLNSFTGQNCC-LNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 582
            C N+L    G +   LN S +DV+  H P  TS +NM+H +Q++    +  YD+ + + N  HY Q   PLYNMT++  ++   +  G +D L+D  DV +L   + +H   K +  Y     H D + G +    +Y  ++
Sbjct:  224 CLNILFMMFGYDPKNLNMSRLDVYFSHNPAGTSVQNMLHWSQLLNSTHLKAYDWGSPDLNLVHYNQTTSPLYNMTNM--NVATAIWNGKSDLLADPEDVNILHSEITNHIYYKTISYYN----HIDSLFGLDVYDQVYHEII 359          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LICH_HUMAN (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Homo sapiens GN=LIPA PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 51/156 (32.69%), Postives = 79/156 (50.64%), Query Frame = -2
Query:  160 LLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLND---HEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 618
            +LK +C   G  C  LL  F  +N  LN S VDV+  H P  TS +NM+H +Q ++      +D+ +  +N  HY Q  PP YN+  +   +P  +  GG D L+DV DV +LL  + +   HE          ++ H D++ G +A   LY  ++
Sbjct:  252 ILKELC---GNLCF-LLCGFNERN--LNMSRVDVYTTHSPAGTSVQNMLHWSQAVKFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDML--VPTAVWSGGHDWLADVYDVNILLTQITNLVFHES-------IPEWEHLDFIWGLDAPWRLYNKII 392          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIPM_MOUSE (Lipase member M OS=Mus musculus GN=Lipm PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.167e-12
Identity = 43/148 (29.05%), Postives = 78/148 (52.70%), Query Frame = -2
Query:  148 CTN---LLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 582
            C+N   LL  F   N  +N S  +V++ H P  TS +N++H +Q +  G +  +D+ ++ +N++   QP P  Y +  +   +P  +  GG D LS+ +DVK LL  + +    K +     ++AH D++ G +A Q +Y  ++   K
Sbjct:  269 CSNIILLLGGFNTNN--MNMSRANVYVAHTPAGTSVQNILHWSQAVNSGELRAFDWGSETKNQEKCNQPTPIRYKVRDMM--VPTAMWTGGQDWLSNPDDVKTLLSEVTNLIYHKNI----PEWAHVDFIWGLDAPQRVYNEIIHLMK 408          
The following BLAST results are available for this feature:
BLAST of CX675648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
LIPG_MOUSE8.517e-1531.58Gastric triacylglycerol lipase OS=Mus musculus GN=... [more]
LICH_RAT4.227e-1430.41Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LICH_MOUSE1.230e-1333.56Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LICH_MACFA1.360e-1231.88Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LIPJ_HUMAN1.776e-1230.28Lipase member J OS=Homo sapiens GN=LIPJ PE=2 SV=2[more]
LICH_HUMAN2.319e-1232.69Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LIPM_MOUSE5.167e-1229.05Lipase member M OS=Mus musculus GN=Lipm PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_63G06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63G06-M11-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675648 ID=CX675648; Name=CX675648; organism=Citrus sinensis; type=EST; length=658bp
TTTTTTTACAATTAAGTGATATTTGCATTAACATAAAAGTCATTTAATAA
AAAAAGGGTACATCTTTAGAGAACCAACGCAAATGATTCGAGCAGACTCT
CTCTCTTTGTCTTTCTGTGAGTTGTCTCATTTACATTTTCATTGTAGCTT
AAAGAAAGCCATGAGAGGCTCATACAGAACTTGCCCAGCATTTTCACCCA
TAACATAGTCTGCATGAGCATAATCCTGTCTGTACTGAACTACAAGCTTA
TCTCCCTCATGATCGTTGAGGCTCTCCAGCAGCAGTTTCACATCATTGAC
ATCCGAAAGAGCGTCGGCTCCTCCGTAACTGAGAAAGAGAGGAAGATCAT
GCGGAATGCTTGTCATGTTGTATAGAGGCGGATTCGGCTGCCCATAGTGT
TTCTTGTTCTCTTCTTTATTGTTGTAATCGTACATTGCAATGGTTCCTTC
TCTAATCATTTGAGCTACGTGGATCATGTTCTTAGTTGAAGTTGCCTGAG
GCTCGTGTTCTAGAAATACATCTACTATCGAAGAGTTTAGGCAGCAGTTT
TGGCCTGTGAAAGAGTTCAATAAGTTGGTACAATCAACTCCNGGTTTTTG
GCAAATGTTTTTAAGAAGTTTGACTACNGCCTCCCCTCTTGGATCAAATT
CATCAAGG
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