CK939231

Overview
NameCK939231
Unique NameCK939231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939231 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.892e-57
Identity = 98/152 (64.47%), Postives = 126/152 (82.89%), Query Frame = 2
Query:  161 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 616
            MSTPA++RLMRDFKR+QQD P+G+S +P  +++M WNAVI GP DTP++ GTF+L LQF E YPNKPP+V+F+S MFHPN+YA G +CLDILQN+WSP YDV++ILTSIQSLL DPN +SPAN EAA ++ +++ +Y +RVRE VE SW  D
Sbjct:    1 MSTPAKRRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVRETVENSWNED 152          
BLAST of CK939231 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3)

HSP 1 Score: 220.705 bits (561), Expect = 7.695e-57
Identity = 97/149 (65.10%), Postives = 124/149 (83.22%), Query Frame = 2
Query:  161 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 607
            MST AR+RLMRDFKR+Q DPPAG+S +P  +++M WNAVI GP DTP++ GTF+L + F E YPNKPP+V+F+S MFHPN+YA G +CLDILQN+WSP YDVAA+LTSIQSLL DPN  S AN EA+ ++ +N++EY++RVRE VE+SW
Sbjct:    1 MSTAARRRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRETVEKSW 149          
BLAST of CK939231 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.695e-57
Identity = 98/152 (64.47%), Postives = 124/152 (81.58%), Query Frame = 2
Query:  161 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 616
            MSTPAR+RLMRDFKR+QQDPP+G+S +P  +++M WNAVI GP DTP++ GTF+L L F E YPNKPP V+F+S MFHPN+YA G +CLDILQN+WSP YDV++ILTS+QSLL DPN +SPAN EAA ++ +++  Y +RVRE VE SW  D
Sbjct:    1 MSTPARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRETVENSWNDD 152          
BLAST of CK939231 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.695e-57
Identity = 98/149 (65.77%), Postives = 124/149 (83.22%), Query Frame = 2
Query:  161 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 607
            MST AR+RLMRDFKR+Q DPPAG+S +P  +++M WNAVI GP DTP++ GTF+L + F E YPNKPP V+F+S+MFHPN+Y  G +CLDILQN+WSP YDVAAILTSIQSLL DPN +SPAN EA+ ++ +N++EY +RVRE VE+SW
Sbjct:    1 MSTSARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRETVEKSW 149          
BLAST of CK939231 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.005e-56
Identity = 98/149 (65.77%), Postives = 124/149 (83.22%), Query Frame = 2
Query:  161 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 607
            MST AR+RLMRDFKR+Q DPPAG+S +P  +++M WNAVI GP DTP++ GTF+L + F E YPNKPP V+F+S+MFHPN+Y  G +CLDILQN+WSP YDVAAILTSIQSLL DPN +SPAN EA+ ++ +N++EY +RVRE VE+SW
Sbjct:    1 MSTSARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRETVEKSW 149          
BLAST of CK939231 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.313e-56
Identity = 97/152 (63.82%), Postives = 127/152 (83.55%), Query Frame = 2
Query:  161 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 616
            MSTPAR+RLMRDFKR+++D P G+S +P  +++M+WNA+I GP DTP++ GTF+L L+F E+YPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA +F ++K +Y +RV+E VE+SW  D
Sbjct:    1 MSTPARRRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKETVEKSWEDD 152          
BLAST of CK939231 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.313e-56
Identity = 97/149 (65.10%), Postives = 126/149 (84.56%), Query Frame = 2
Query:  161 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 607
            MSTPAR+RLMRDFKR+++D P G+S +P  +++M+WNA+I GP DTP++ GTF+L L+F EDYPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA +F ++K +Y +RV+E VE+SW
Sbjct:    1 MSTPARRRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKETVEKSW 149          
BLAST of CK939231 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.714e-56
Identity = 97/152 (63.82%), Postives = 127/152 (83.55%), Query Frame = 2
Query:  161 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 616
            MSTPAR+RLMRDFKR+++D P G+S +P  +++M+WNA+I GP DTP++ GTF+L L+F E+YPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA +F ++K +Y +RV+E VE+SW  D
Sbjct:    1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDD 152          
BLAST of CK939231 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.714e-56
Identity = 97/152 (63.82%), Postives = 127/152 (83.55%), Query Frame = 2
Query:  161 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 616
            MSTPAR+RLMRDFKR+++D P G+S +P  +++M+WNA+I GP DTP++ GTF+L L+F E+YPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA +F ++K +Y +RV+E VE+SW  D
Sbjct:    1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDD 152          
BLAST of CK939231 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.239e-56
Identity = 95/150 (63.33%), Postives = 126/150 (84.00%), Query Frame = 2
Query:  161 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 610
            MST AR+RLMRDFKR+QQDPP G+S +P  ++++ WNAVI GP +TP++ GTF++ LQF E YPNKPP V+FVS+MFHPN+Y+ G +CLDILQN+WSP YDVAAILTS+QSLL DPN +SPAN EA+ ++ +++++Y +RVR+ VE SWT
Sbjct:    1 MSTTARRRLMRDFKRMQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVRDTVEASWT 150          
The following BLAST results are available for this feature:
BLAST of CK939231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UBC2_DEBHA5.892e-5764.47Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces ... [more]
UBC2_NEUCR7.695e-5765.10Ubiquitin-conjugating enzyme E2 2 OS=Neurospora cr... [more]
UBC2_CANAL7.695e-5764.47Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]
UBC2_ASPFU7.695e-5765.77Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBC2_EMENI1.005e-5665.77Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_KLULA1.313e-5663.82Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces... [more]
UBC2_CANGA1.313e-5665.10Ubiquitin-conjugating enzyme E2 2 OS=Candida glabr... [more]
UBC2_YEAST1.714e-5663.82Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces... [more]
UBC2_ASHGO1.714e-5663.82Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossyp... [more]
UBC2_YARLI2.239e-5663.33Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004432_E01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IF_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939231 ID=CK939231; Name=CK939231; organism=Citrus sinensis; type=EST; length=816bp
GGGGCTCTCTCTCTCTTTTGTTTCTCTGATCAAATTGAGTACCATGGAAT
TCTTTCTCTGATACCGCCTGCTTTTCGATTGTTTCCCGAGAAAAATCTCG
CTGCGATTCTGAAGCTTTTACTGCAATCAACGCTACTTGCCGCGTCAGCT
CGCAGTGAGAATGTCGACTCCTGCAAGGAAGAGATTGATGAGGGATTTTA
AGAGGTTACAACAAGATCCTCCGGCTGGCATTAGTGGTGCTCCTCAGGAC
AACAGTATAATGCTTTGGAATGCTGTTATATTCGGGCCGGATGACACCCC
ATGGGATGGAGGTACGTTTAAATTGACACTTCAGTTCACAGAGGATTATC
CAAATAAGCCACCAACAGTGCGCTTTGTTTCTCGGATGTTCCATCCAAAT
ATTTATGCGGATGGAAGCATTTGCTTGGACATTCTACAAAATCAGTGGAG
TCCAATTTACGATGTAGCAGCAATACTCACGTCAATTCAGTCATTGCTTT
GTGACCCAAATCCAAACTCTCCTGCAAATTCGGAGGCAGCACGGATGTTT
AGCGAGAACAAGCGTGAATACAATAGGAGAGTACGGGAAATTGTTGAGCA
GAGTTGGACTGCTGACTAGTGGCAACTTGTTGGAATGTAGGGAACTTCAA
AAATAGTCCAATGGCTTGTTCTAAATAACATTTAAGATTCAAAAGGTTGG
TGGTGTGAACTCTTGACATGTTTTATGTTTGTTTCGCCTTATGAGGATGG
ATGGTTGGCCTCTTATTGTTAATTTCTCGTCTTTGGGAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
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