CK939209
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.289e-23 Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 3 Query: 210 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 +++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL IWDTAGQERF T+T+SYYRGA GI++ Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIML 87
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.289e-23 Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 3 Query: 210 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 +++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL IWDTAGQERF T+T+SYYRGA GI++ Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIML 87
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.289e-23 Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 3 Query: 210 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 +++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL IWDTAGQERF T+T+SYYRGA GI++ Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIML 87
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.289e-23 Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 3 Query: 210 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 +++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL IWDTAGQERF T+T+SYYRGA GI++ Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIML 87
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.289e-23 Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 3 Query: 210 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 +++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL IWDTAGQERF T+T+SYYRGA GI++ Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIML 87
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.073e-22 Identity = 51/88 (57.95%), Postives = 68/88 (77.27%), Query Frame = 3 Query: 204 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 S S E+D L K+L+IGDSGVGKS +LL F + F + TIGVDF ++ +++ GKK+KL IWDTAGQERF+T+T+SYYRGA G+I+ Sbjct: 24 SESHPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLII 111
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.401e-22 Identity = 49/82 (59.76%), Postives = 67/82 (81.71%), Query Frame = 3 Query: 222 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 +D+L KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWDTAGQERFRT+T++YYRGA GI++ Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILL 93
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 3 Query: 222 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 +D LFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTAGQERF T+TSSYYRGA G ++ Sbjct: 5 YDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLV 86
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22 Identity = 50/86 (58.14%), Postives = 67/86 (77.91%), Query Frame = 3 Query: 210 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 +++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+D K+K V++ GKK+KL IWDTAGQERF T+T+SYYRGA GI++ Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIML 87 HSP 2 Score: 67.781 bits (164), Expect = 9.473e-11 Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 640 LIQIYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREXGCPFIECSAKTRVNVQQCF 882 ++ +YD+T +F N+S W + ID ++ N+D ++L+GNK D E +RVV K +G ARE G F E SAK +N+++ F Sbjct: 85 IMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAF 163
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.324e-22 Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 198 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 +S SQ+E+DYL+K+++IGDSGVGKS+LL FT + F E TIGV+F + + GK +K +WDTAGQER+R +TS+YYRGA G ++ Sbjct: 2 TSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALL 91 The following BLAST results are available for this feature:
BLAST of CK939209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 358
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939209 ID=CK939209; Name=CK939209; organism=Citrus sinensis; type=EST; length=882bpback to top |