CX046984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046984 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.586e-17 Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 3 Query: 42 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 269 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76 HSP 2 Score: 67.3958 bits (163), Expect = 2.898e-11 Identity = 29/54 (53.70%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 270 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDXR 431 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDK 54
BLAST of CX046984 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.908e-16 Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 3 Query: 42 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 269 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76 HSP 2 Score: 66.2402 bits (160), Expect = 6.456e-11 Identity = 30/56 (53.57%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 270 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDXRTL 437 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTV 56
BLAST of CX046984 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4) HSP 1 Score: 68.5514 bits (166), Expect = 1.301e-11 Identity = 43/129 (33.33%), Postives = 66/129 (51.16%), Query Frame = 3 Query: 54 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDXRTL 437 VK L G + V +S T+ +K +I K G+P QQRL L+DG TL+ + ST+ LV++ + I V+ G + EV + T+D +K K+ +E + DQ L F G+ +ED L Sbjct: 7 VKMLGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELL 135
BLAST of CX046984 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.699e-11 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 42 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 269 M++F++TLTG L V +T+ +VKAKI+ EGIP +Q LI+ +LE+ L DYNI + TL LVL +RGG Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGG 103 The following BLAST results are available for this feature:
BLAST of CX046984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046984 ID=CX046984; Name=CX046984; organism=Citrus sinensis; type=EST; length=440bpback to top |