CK939182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_RICPR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia prowazekii GN=petA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 7.776e-44 Identity = 79/135 (58.52%), Postives = 102/135 (75.56%), Query Frame = 1 Query: 217 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKL 615 S + S DVLAL+S+EVDLS+I G TVTVKW+GKP+FI RT ++I A +V ++ L DP+ D VRVK + WLV +G+CTHLGC+PL + G++ GWFCPCHGS YD SGR+RKGPAP NL VP Y F+ + K+ Sbjct: 40 SFNPSADVLALSSIEVDLSNIAIGQTVTVKWQGKPIFITNRTHDEIAAARAVKMSELIDPERDEVRVKAGHDNWLVTIGICTHLGCVPLSHKGEYNGWFCPCHGSQYDSSGRVRKGPAPLNLAVPPYIFISDKKI 174
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_RICTY (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia typhi GN=petA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.732e-43 Identity = 80/135 (59.26%), Postives = 102/135 (75.56%), Query Frame = 1 Query: 217 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKL 615 S++ S DVLAL+S+EVDLSSI G TVTVKW+GKP+FI RT + I A +V ++ L DP++D VRVK + WLV +G+CTHLGC+PL N G++ GWFCPCHGS YD SGR+RKGPA NL VP Y F+ + K+ Sbjct: 40 SLNPSTDVLALSSIEVDLSSIAIGQTVTVKWQGKPIFITNRTPDGIASARAVKMSELIDPEKDEVRVKAGHDNWLVTIGICTHLGCVPLSNQGEYNGWFCPCHGSQYDSSGRVRKGPASLNLVVPPYIFISDTKI 174
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_RICFE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia felis GN=petA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.732e-43 Identity = 79/135 (58.52%), Postives = 101/135 (74.81%), Query Frame = 1 Query: 217 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKL 615 S++ S DVLAL+S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V ++ L DP+ D RVK + WLV +G+CTHLGC+PL N G++ GWFCPCHGS YD SGR+R+GPAP NL VP Y F+ + K+ Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTHLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKI 174
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_RICCN (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia conorii GN=petA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.732e-43 Identity = 79/135 (58.52%), Postives = 101/135 (74.81%), Query Frame = 1 Query: 217 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKL 615 S++ S DVLAL+S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V ++ L DP+ D RVK + WLV +G+CTHLGC+PL N G++ GWFCPCHGS YD SGR+R+GPAP NL VP Y F+ + K+ Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTHLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKI 174
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_RHOCA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter capsulatus GN=petA PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.501e-42 Identity = 82/151 (54.30%), Postives = 106/151 (70.20%), Query Frame = 1 Query: 220 MSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVR------------------VKNPEWLVVVGVCTHLGCIPL-PNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKL 615 M+AS DV A+AS+ VD+S++E GT +TVKWRGKPVFIRRR E+DI+LA SV + +LRD ++ EWLV++GVCTHLGC+P+ +GDFGGWFCPCHGSHYD +GRIRKGPAP NL++P+ F+DE + Sbjct: 38 MNASADVKAMASIFVDVSAVEVGTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRDTSAENANKPGAEATDENRTLPAFDGTNTGEWLVMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFVDETTI 188
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_RHOVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 8.047e-41 Identity = 83/168 (49.40%), Postives = 107/168 (63.69%), Query Frame = 1 Query: 121 DASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLAL-ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKL 615 +A++R F Y V A+ + + F+ M+ +A A +++D+S + G V V WRGKP+FIR RT ++IQ + DV +L DPQ DS RVK EWLVV CTHLGCIPL + GD+GGWFCPCHGS YD SGR+RKGPAP NL VP Y F+D K+ Sbjct: 8 EATRRDFLYVATAA---VGAAGVAAVAWPFITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGALIDPQPDSARVKPGKAEWLVVYASCTHLGCIPLGHQGDWGGWFCPCHGSQYDASGRVRKGPAPTNLPVPPYEFVDNTKI 172
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_RHOSH (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter sphaeroides GN=petA PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.341e-40 Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1 Query: 127 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRV--------------KNPEWLVVVGVCTHLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKL 615 ++R F Y+ G V + + M+ S DV ALAS+ VD+SS+EPG +TVK+ GKP+FIRRRTE DI+L SV + L D + + + EWLV+ GVCTHLGC+P+ +GDFGGWFCPCHGSHYD +GRIRKGPAP NL +P+ F+DE + Sbjct: 10 TRRDFLYYATAGAGAVATGAA---VWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTI 184
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_BRAJA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Bradyrhizobium japonicum GN=petA PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.862e-38 Identity = 74/139 (53.24%), Postives = 98/139 (70.50%), Query Frame = 1 Query: 208 FVLSMSASKDVLAL-ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKN--PEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKL 615 F+ M+ +A A +EVDLS I G + V WRGKP++I RT++ I A +V+VASL DPQ D RVK+ +WLVV+G+CTHLGCIP+ + G++ G+FCPCHGS YD SGRIR+GPAP NL VP Y F+ + K+ Sbjct: 35 FISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVASLPDPQSDEARVKSGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQGPAPANLPVPPYQFVSDTKI 173
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_CHRVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Chromatium vinosum GN=petA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.427e-21 Identity = 59/160 (36.88%), Postives = 88/160 (55.00%), Query Frame = 1 Query: 199 ILKFVLSMSASKDVLAL-ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVD---------VASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPL---------PNAGDFGGWFCPCHGSHYDISGRIRKG-PAPFNLEVPMYNFLDENKLL 618 ++ FV SM+ S A A +E D+S +EPG + VKWRG PV++ R+ E + +S D V D ++ R PE+LV +G+CTHLGC P +G GG+ CPCHGS +D++ R+ K PAP NL +P + +L++ +L Sbjct: 40 LVPFVASMNPSARARAAGAPVEADISKLEPGALLRVKWRGMPVWVVHRSSEMLAALSSNDPKLVDPTSEVPQQPDYCKNPTRSIKPEYLVAIGICTHLGCSPTYRPEFGPDDLGSGWKGGFHCPCHGSRFDLAARVFKNVPAPTNLVIPKHVYLNDTTIL 199 The following BLAST results are available for this feature:
BLAST of CK939182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939182 ID=CK939182; Name=CK939182; organism=Citrus sinensis; type=EST; length=620bpback to top |