CK939122

Overview
NameCK939122
Unique NameCK939122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939122 vs. ExPASy Swiss-Prot
Match: H90B2_HUMAN (Putative heat shock protein HSP 90-beta 2 OS=Homo sapiens GN=HSP90AB2P PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 3.971e-34
Identity = 75/108 (69.44%), Postives = 91/108 (84.26%), Query Frame = 2
Query:  185 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIAR-SGTKEFMEAL 505
            E ETFAFQAEI QL+SLIINTFYSNKEIFL ELISN+SDALDKIR+ESLTD SKLD+  EL I IIP+   ++L+++D+GIGMTKADL+NNLGTIA+     E++E +
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNTQEHTLTLVDTGIGMTKADLINNLGTIAKFQDQTEYLEEM 118          
BLAST of CK939122 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 8.280e-32
Identity = 68/113 (60.18%), Postives = 90/113 (79.65%), Query Frame = 2
Query:  170 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 508
            V  A + ET AFQAEINQLLSL+IN+ YS+KEIFLREL+SN+SDALDK+RF ++T+   L  +P L + +IPD+   +L+I D+GIGM+  +LV NLGTIA SG++EF+EALA
Sbjct:    3 VENAPQRETHAFQAEINQLLSLVINSLYSHKEIFLRELVSNASDALDKLRFRAITEPELLADEPALELRLIPDEAKGTLTIEDTGIGMSHDELVKNLGTIAHSGSREFIEALA 115          
BLAST of CK939122 vs. ExPASy Swiss-Prot
Match: H90B4_HUMAN (Putative heat shock protein HSP 90-beta 4 OS=Homo sapiens GN=HSP90AB4P PE=5 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.109e-31
Identity = 68/100 (68.00%), Postives = 84/100 (84.00%), Query Frame = 2
Query:  227 LSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 526
            +SLIINTFYSNKEIFL+ELISN+SDALDKIR+ESLTD SKLD   EL I IIP+     L+++++GIGMTKADL+NNLG IA+SGT+ FMEA  + A++S
Sbjct:    1 MSLIINTFYSNKEIFLQELISNASDALDKIRYESLTDPSKLDGGKELKIDIIPNPRECILTLVNTGIGMTKADLINNLGAIAKSGTEAFMEAFQSCAEIS 100          
BLAST of CK939122 vs. ExPASy Swiss-Prot
Match: ENPL_CHICK (Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.196e-30
Identity = 67/121 (55.37%), Postives = 87/121 (71.90%), Query Frame = 2
Query:  164 QVVSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 526
            Q+  +  ++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+GIGMTK +L+ NLGTIA+SGT EF+  +    D S
Sbjct:   64 QIKEIREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNMLHVTDTGIGMTKEELIKNLGTIAKSGTSEFLNKMTEMQDDS 184          
BLAST of CK939122 vs. ExPASy Swiss-Prot
Match: ENPL_PIG (Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 2.039e-30
Identity = 65/115 (56.52%), Postives = 86/115 (74.78%), Query Frame = 2
Query:  164 QVVSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 508
            Q+  +  ++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +A
Sbjct:   65 QIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMA 179          
BLAST of CK939122 vs. ExPASy Swiss-Prot
Match: ENPL_PONAB (Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.479e-30
Identity = 64/114 (56.14%), Postives = 85/114 (74.56%), Query Frame = 2
Query:  164 QVVSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 505
            Q+  +  ++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   65 QIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178          
BLAST of CK939122 vs. ExPASy Swiss-Prot
Match: ENPL_MACFA (Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.479e-30
Identity = 64/114 (56.14%), Postives = 85/114 (74.56%), Query Frame = 2
Query:  164 QVVSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 505
            Q+  +  ++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   65 QIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178          
BLAST of CK939122 vs. ExPASy Swiss-Prot
Match: ENPL_HUMAN (Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.479e-30
Identity = 64/114 (56.14%), Postives = 85/114 (74.56%), Query Frame = 2
Query:  164 QVVSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 505
            Q+  +  ++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   65 QIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178          
BLAST of CK939122 vs. ExPASy Swiss-Prot
Match: ENPL_MOUSE (Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 5.934e-30
Identity = 64/114 (56.14%), Postives = 85/114 (74.56%), Query Frame = 2
Query:  164 QVVSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 505
            Q+  +  ++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   65 QIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178          
BLAST of CK939122 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.934e-30
Identity = 64/114 (56.14%), Postives = 85/114 (74.56%), Query Frame = 2
Query:  164 QVVSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 505
            Q+  +  ++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   65 QIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178          
The following BLAST results are available for this feature:
BLAST of CK939122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
H90B2_HUMAN3.971e-3469.44Putative heat shock protein HSP 90-beta 2 OS=Homo ... [more]
HTPG_MYXXD8.280e-3260.18Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]
H90B4_HUMAN4.109e-3168.00Putative heat shock protein HSP 90-beta 4 OS=Homo ... [more]
ENPL_CHICK1.196e-3055.37Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1[more]
ENPL_PIG2.039e-3056.52Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3[more]
ENPL_PONAB3.479e-3056.14Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1[more]
ENPL_MACFA3.479e-3056.14Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2... [more]
ENPL_HUMAN3.479e-3056.14Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1[more]
ENPL_MOUSE5.934e-3056.14Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2[more]
ENPL_CANFA5.934e-3056.14Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004433_H06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IIF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939122 ID=CK939122; Name=CK939122; organism=Citrus sinensis; type=EST; length=526bp
GGGGGTAGAAACCCTAACCCAAAGGCTTCTATATAACGCTCGCTTTCACG
GGCTCTTCAGCCTCACTAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTGT
CTCTCGTTCGCTTCCAAAAACCCTTGTTTATAACTCAGAAGAGATCGTTT
TTTGGTTGAACGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTG
CCTTTCAGGCTGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTT
TACAGTAACAAGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGA
TGCATTGGATAAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAG
ATGCCCAACCAGAGCTTTTCATTCACATTATCCCTGATAAGACCAACAAC
TCATTGTCTATTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGT
GAACAACCTTGGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGG
CATTGGCTGCTGGGGCGGATGTGAGC
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