CK939031

Overview
NameCK939031
Unique NameCK939031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939031 vs. ExPASy Swiss-Prot
Match: RASZ_DICDI (Ras-like protein rasZ OS=Dictyostelium discoideum GN=rasZ PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.393e-21
Identity = 55/169 (32.54%), Postives = 94/169 (55.62%), Query Frame = 1
Query:  172 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMAS 675
            L +L ++GD GVGK+ + ++F  + ++  Y  TI   ++ + V  D +   L I DTAGQ+    +   + R   G ++VY +T + SF+ V+ +  +I R    ++V  +++GNK DL D++ V+Y+  K  A  +G+ FME SAK   N+E+ F      +K R  S
Sbjct:    9 LVRLCIMGDGGVGKTAVTIQFISNHFVYYYDPTIEDSYRKQCVIDD-QVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSITSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNKSDLDDERQVTYQEGKDLARCLGMSFMEVSAKSRANIEEVFNETVRSVKRREES 176          
BLAST of CK939031 vs. ExPASy Swiss-Prot
Match: RASX_DICDI (Ras-like protein rasX OS=Dictyostelium discoideum GN=rasX PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.393e-21
Identity = 55/166 (33.13%), Postives = 93/166 (56.02%), Query Frame = 1
Query:  172 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNR 666
            L KL ++GD GVGK+ + ++F  + ++  Y  TI   ++ + V  D +   L I DTAGQ+    +   + R   G ++VY VT + SF+ +  +  +I+R   S++V  +++GNK DL D++ V+Y+  K  A   G+ FME SAK   N+E+ F      +K +
Sbjct:    9 LVKLCIMGDGGVGKTAVTIQFISNHFVHYYDPTIEDSYRKQCVIDD-QVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSVTSRSSFDQIAFFKEQINRVLDSDDVPIMMIGNKSDLDDERQVTYQEGKDLARCFGMSFMEVSAKTRSNIEEVFNETVRCVKRK 173          
BLAST of CK939031 vs. ExPASy Swiss-Prot
Match: RANL_DROME (GTP-binding nuclear protein Ran-like OS=Drosophila melanogaster GN=ran-like PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.393e-21
Identity = 56/185 (30.27%), Postives = 99/185 (53.51%), Query Frame = 1
Query:  160 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAVNNARPPTVQ 714
            E   +FKL+LIGD G GK+ L+ R     +   Y +T+GV+ +      +    ++ +WDTAGQER+  +   Y+  +   II++DV    ++NNVK+W  ++ R    N+  ++ GNK D+  KK  +++    F  +  I  +E SAK + NVE+ F+ +      ++   P++   + P +Q
Sbjct:    6 EVKAIFKLILIGDGGTGKTTLVKRHLTGEFKMQYNATLGVEVEQLLFNTNRGVFRIDVWDTAGQERYGGLRDGYFVQSQCAIIMFDVASSNTYNNVKRWHRDLVRVCG-NIPIVICGNKVDIMHKK--TWKKGVDFDRKTNIYLIEMSAKSNYNVEKPFVYLL----RKLVGDPSLQLVQSPAIQ 183          
BLAST of CK939031 vs. ExPASy Swiss-Prot
Match: RB32D_DICDI (Ras-related protein Rab-32D OS=Dictyostelium discoideum GN=rab32D PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21
Identity = 54/165 (32.73%), Postives = 94/165 (56.97%), Query Frame = 1
Query:  178 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNK---------LLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAM 645
            KL+LIGD  VGK+ +L R     + + Y STIG DF  +T  Q+     +Q+WDTAGQE++  +TS+++R +  +I+V+D++++ SF N+  W  +   + S+++N          LL+ NK D   + V   E  +   D     + E SAK S+N++++ + +
Sbjct:   11 KLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQLWDTAGQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQ---FKSKSINPDGTEKQLPILLLANKSDSLTRAVDQSEINQWCTDHKVNLYYEVSAKSSINIKESILKL 172          
BLAST of CK939031 vs. ExPASy Swiss-Prot
Match: RAS_LENED (Ras-like protein OS=Lentinula edodes PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21
Identity = 54/163 (33.13%), Postives = 89/163 (54.60%), Query Frame = 1
Query:  175 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLV-GNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIK 660
            +KL+++G  GVGKS L ++F    ++D Y  TI   ++ + V  D +   L + DTAGQE +  +   Y R   G ++VY +T + SF  +  +  +I R   ++   ++V  NKCDL  ++ V     +  A   G  F+ETSAK  +NV+QAF  +  +I+
Sbjct:   11 YKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCVIDD-EVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKDQDTFPVVVVANKCDLEYERQVGMNEGRDLARHFGCKFVETSAKVRINVDQAFQDLVREIR 172          
BLAST of CK939031 vs. ExPASy Swiss-Prot
Match: RAS_ARTSA (Ras-like protein (Fragment) OS=Artemia salina PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21
Identity = 61/175 (34.86%), Postives = 95/175 (54.29%), Query Frame = 1
Query:  202 GVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADI-KNRMASQPAVNNARPPTVQIK 720
            GVGKS L ++   + ++D Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G ++V+ V + +SF ++  +  +I R   +E V  +LVGNKCDL   + V    A+  A + GIPF+ETSAK  + V+  F  +  +I K++M    +    R    Q+K
Sbjct:    2 GVGKSALTIQLIQNHFVDEYDPTIEDSYRQQVVI-DGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNNAKSFEDISAYREQIKRVKDAEEVPMVLVGNKCDL-PTRAVDMSQAREVARQYGIPFVETSAKTRMGVDDGFYTLVREIKKDKMKKGNSSRRGRSGRKQLK 174          
BLAST of CK939031 vs. ExPASy Swiss-Prot
Match: RASN_DANRE (GTPase NRas OS=Danio rerio GN=nras PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21
Identity = 59/164 (35.98%), Postives = 93/164 (56.71%), Query Frame = 1
Query:  175 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKN 663
            +KL+++G  GVGKS L ++   + ++D Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G + V+ + + +SF +V  +  +I R   S++V  +LVGN CDL   + V  + A+  A   GI F+ETSAK    VE AF  +  +I++
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADVHLYREQIKRVKDSDDVPMVLVGNICDLA--RTVDTKQAQELARSYGIEFVETSAKTRQGVEDAFYTLVREIRH 164          
BLAST of CK939031 vs. ExPASy Swiss-Prot
Match: RAS2_DROME (Ras-like protein 2 OS=Drosophila melanogaster GN=Ras64B PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21
Identity = 59/173 (34.10%), Postives = 96/173 (55.49%), Query Frame = 1
Query:  175 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADI-KNRMASQPAV 687
            +KL+++G  GVGKS + ++F    ++  Y  TI  D   +    D    KL I DTAGQE F  +   Y R   G ++V+ + D  SF+ + ++  +I R    +    L+VGNKCDL  ++ VS E A+  +  + IP++E SAK  +NV+QAF  +   + K ++A +P +
Sbjct:    6 YKLVVVGGGGVGKSAITIQFIQSYFVTDYDPTIE-DSYTKQCNIDDVPAKLDILDTAGQEEFSAMREQYMRSGEGFLLVFALNDHSSFDEIPKFQRQILRVKDRDEFPMLMVGNKCDLKHQQQVSLEEAQNTSRNLMIPYIECSAKLRVNVDQAFHELVRIVRKFQIAERPFI 177          
BLAST of CK939031 vs. ExPASy Swiss-Prot
Match: RBL2B_HUMAN (Rab-like protein 2B OS=Homo sapiens GN=RABL2B PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.494e-21
Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  178 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAF 636
            K++ +GDS VGKS L+ RF  D +    +ST  +     T   DG+T+ +  WDTAGQERF+++ +SYY  AH  I+V+DV  + ++ N+  W  E+  +  E +  ++V NK D  +    S+  AK F+    +P    SA D  NV + F
Sbjct:   23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFRPE-IPCIVVANKIDDINVTQKSFNFAKKFS----LPLYFVSAADGTNVVKLF 170          
BLAST of CK939031 vs. ExPASy Swiss-Prot
Match: RBL2A_PONAB (Rab-like protein 2A OS=Pongo abelii GN=RABL2A PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.494e-21
Identity = 57/153 (37.25%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  178 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAF 636
            K++ +GDS VGKS L+ RF  D +    +ST  +     T   DGKT+ +  WDTAGQERF+++ +SYY  AH  I+V+DV  + ++ N+  W  E+  +  E +  L+V NK D  D  V   + +  FA +  +P    SA D  NV + F
Sbjct:   23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYKNLSAWYTELREFRPE-IPCLVVANKID-ADINVT--QKSFNFAKKFSLPLYFVSAADGTNVVKLF 171          
The following BLAST results are available for this feature:
BLAST of CK939031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASZ_DICDI4.393e-2132.54Ras-like protein rasZ OS=Dictyostelium discoideum ... [more]
RASX_DICDI4.393e-2133.13Ras-like protein rasX OS=Dictyostelium discoideum ... [more]
RANL_DROME4.393e-2130.27GTP-binding nuclear protein Ran-like OS=Drosophila... [more]
RB32D_DICDI5.738e-2132.73Ras-related protein Rab-32D OS=Dictyostelium disco... [more]
RAS_LENED5.738e-2133.13Ras-like protein OS=Lentinula edodes PE=3 SV=1[more]
RAS_ARTSA5.738e-2134.86Ras-like protein (Fragment) OS=Artemia salina PE=3... [more]
RASN_DANRE5.738e-2135.98GTPase NRas OS=Danio rerio GN=nras PE=2 SV=1[more]
RAS2_DROME5.738e-2134.10Ras-like protein 2 OS=Drosophila melanogaster GN=R... [more]
RBL2B_HUMAN7.494e-2135.95Rab-like protein 2B OS=Homo sapiens GN=RABL2B PE=2... [more]
RBL2A_PONAB7.494e-2137.25Rab-like protein 2A OS=Pongo abelii GN=RABL2A PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004435_A09 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IVF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939031 ID=CK939031; Name=CK939031; organism=Citrus sinensis; type=EST; length=737bp
GGGGATCATCANNNTCATCGACATTTTGCTTTCTTCGTCAAATTCTCTCT
CAATCTCACATCCTTAGCTTGTCTGTGCCAAACTCCCGGTCCAATCTCCA
GCTGGACCGGTTCGATTCTGCGCGAACCCCCTCAACATCTTATTGCAGTC
ATGAATCCTGAATATGACTACTTGTTCAAGCTTTTGCTGATTGGAGATTC
TGGAGTTGGCAAATCATGTCTTCTTCTGAGATTTGCTGATGATTCGTACC
TGGACAGTTACATTAGCACTATTGGGGTTGACTTTAAAATTCGCACAGTG
GAGCAAGACGGGAAGACTGTAAAACTCCAAATTTGGGACACTGCAGGGCA
AGAACGATTCAGGACAATCACTAGCAGCTACTACCGTGGAGCACATGGCA
TTATTATTGTTTATGATGTTACAGACCAAGAGAGCTTCAACAACGTTAAG
CAGTGGTTGAATGAAATTGATCGCTATGCAAGTGAAAATGTAAACAAGCT
TCTGGTTGGAAACAAGTGTGATCTCACTGATAAGAAAGTTGTCTCTTATG
AAACAGCGAAGGCATTTGCTGATGAAATTGGCATCCCGTTCATGGAGACC
AGCGCAAAGGATTCTTTGAACGTGGAACAAGCTTTTATGGCTATGACTGC
TGACATTAAGAACAGGATGGCAAGTCAACCTGCAGTGAACAATGCAAGGC
CACCAACTGTGCAGATAAAAGGACAACCGGTGAACCA
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