CX675593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_RAT (60S ribosomal protein L7a OS=Rattus norvegicus GN=Rpl7a PE=1 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 3.484e-48 Identity = 91/159 (57.23%), Postives = 122/159 (76.73%), Query Frame = -1 Query: 298 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 771 D+ A+ L KL KYRPE + KK+RLL RA+ +A GK V K+P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 88 DRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_MOUSE (60S ribosomal protein L7a OS=Mus musculus GN=Rpl7a PE=2 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 3.484e-48 Identity = 91/159 (57.23%), Postives = 122/159 (76.73%), Query Frame = -1 Query: 298 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 771 D+ A+ L KL KYRPE + KK+RLL RA+ +A GK V K+P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 88 DRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGHLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_MACFA (60S ribosomal protein L7a OS=Macaca fascicularis GN=RPL7A PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.484e-48 Identity = 91/159 (57.23%), Postives = 122/159 (76.73%), Query Frame = -1 Query: 298 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 771 D+ A+ L KL KYRPE + KK+RLL RA+ +A GK V K+P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 88 DRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_HUMAN (60S ribosomal protein L7a OS=Homo sapiens GN=RPL7A PE=1 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 3.484e-48 Identity = 91/159 (57.23%), Postives = 122/159 (76.73%), Query Frame = -1 Query: 298 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 771 D+ A+ L KL KYRPE + KK+RLL RA+ +A GK V K+P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 88 DRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_CHICK (60S ribosomal protein L7a OS=Gallus gallus GN=RPL7A PE=2 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 8.583e-47 Identity = 89/159 (55.97%), Postives = 119/159 (74.84%), Query Frame = -1 Query: 298 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 771 D+ A+ L KL KYRPE + KK+RLL RA+ +A GK K+P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+K K+RLG +VH+KT + + T V EDK +K++EA+K N+ND+Y+E+R+ WGG ++G KS Sbjct: 88 DRQTATQLLKLAHKYRPETKQEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKSKARLGRLVHRKTCTCVAFTQVNPEDKGALAKLVEAVKTNYNDRYDEIRRHWGGNVLGPKS 246
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_ANOGA (60S ribosomal protein L7a OS=Anopheles gambiae GN=RpL7A PE=3 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 6.151e-45 Identity = 84/159 (52.83%), Postives = 122/159 (76.73%), Query Frame = -1 Query: 298 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVE-AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 771 DK A + K+L KYRPE+ A+ +RL +A+A+A GK +K+ ++ G+N V ++EQ KAQLV+IAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG++V++KT + + LT V+N DK +K++E IK NFND+++++R+ WGGG++G KS Sbjct: 94 DKPTAQQVMKMLEKYRPENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQGINSVVKMVEQKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLGTLVYRKTCTCVALTQVENADKPNLAKLVETIKTNFNDRFDDIRRHWGGGLLGPKS 252
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_CAEEL (60S ribosomal protein L7a OS=Caenorhabditis elegans GN=rpl-7A PE=1 SV=3) HSP 1 Score: 170.244 bits (430), Expect = 1.086e-41 Identity = 81/159 (50.94%), Postives = 113/159 (71.07%), Query Frame = -1 Query: 298 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVEA-KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 771 D A FKLL KYRPE AKK RL RA+A A GK E K+P V++G+N +T L+E +AQLV+IAHDV+P+E+V+ LPALCRK +PY I+KGK+ LG++V +KT + + L V EDK +K++E + NF++++EE+RK WGGG+M +KS Sbjct: 89 DSQSARQAFKLLDKYRPESTEAKKNRLRARAEARAAGKKEEVTKRPNTVRHGVNTITRLVETRRAQLVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKGKASLGTVVRRKTTAAVALVDVNPEDKSALNKLVETVNNNFSERHEEIRKHWGGGVMSAKS 247
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_DICDI (60S ribosomal protein L7a OS=Dictyostelium discoideum GN=rpl7a PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.269e-38 Identity = 84/164 (51.22%), Postives = 117/164 (71.34%), Query Frame = -1 Query: 295 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEA---EGKTV-EAKKPIV-VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 771 DKN A LFKLL KYRPE+ + KK RLLK A+A A +G+ +A+KP+ +++G++ VT LIE+ KA+LVVIAHDVDP+ELV++LP LCR+M++PYCIVK KSRLG +VH + AS + LT V + D E + ++E+ K FN+ E RK WGG + ++ Sbjct: 103 DKNTAVHLFKLLDKYRPEEASVKKARLLKIAEARAATPKGQAAPKAEKPVQHLRFGIDSVTKLIEKKKAKLVVIAHDVDPVELVLYLPTLCRRMDVPYCIVKSKSRLGELVHMRNASCVALTGVNSADSNELALLVESAKQMFNNNSEH-RKTWGGNTLSGPAR 265
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_PIG (60S ribosomal protein L7a (Fragment) OS=Sus scrofa GN=RPL7A PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.983e-35 Identity = 75/130 (57.69%), Postives = 98/130 (75.38%), Query Frame = -1 Query: 373 ASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEA 759 A+ L K+ KYRPE + KK+RLL RA+ +A K V K+P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EA Sbjct: 3 ATQLLKVAHKYRPETKQEKKQRLLARAEKKAAXKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEA 132
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_ENCCU (60S ribosomal protein L7a OS=Encephalitozoon cuniculi GN=RPL7A PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.165e-27 Identity = 67/142 (47.18%), Postives = 91/142 (64.08%), Query Frame = -1 Query: 319 KLLLKYRPEDRAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGG 744 +L +KYRPE++ K+ RL Q+E K KPI+VK+GL HVT LIE KA+LV+I+ VDPIE+V++LP LCRKM + Y IV+ + LG +V+ KT S +CL V+ ED+ F ++L A F D YE WGG Sbjct: 49 ELFMKYRPENKQEKRIRL----QSEDPKK---GPKPILVKFGLKHVTNLIETKKAKLVLISASVDPIEVVIFLPTLCRKMGVSYAIVENSTLLGKLVNLKTTSCVCLCDVRPEDEGSFKEMLRTADAIFLDNYETHLSTWGG 183 The following BLAST results are available for this feature:
BLAST of CX675593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675593 ID=CX675593; Name=CX675593; organism=Citrus sinensis; type=EST; length=771bpback to top |