CK939005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939005 vs. ExPASy Swiss-Prot
Match: CLPC_ODOSI (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Odontella sinensis GN=clpC PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.751e-49 Identity = 109/262 (41.60%), Postives = 163/262 (62.21%), Query Frame = 1 Query: 4 GLRXKYEAHXXCKFTLEAINAAVHLSARYISDRYLPDKAIDLVDEAGSRAHIE-------LFKRKKEQQTCILSKPPD--DYWQEIRTVQAMHEVVQGSRLKYDDVVASMGDTSEIVVESSLPSASDDDEPAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPNRPTAAMLFCGPTGVGKTELAKSLAACYFGSESSMLRLDMSEYMERHTVSKLIGSPPGYVGV*RG 762 GLR K+E H + +A+ A L+ ++I+DR+LPDKAID++DEAGSR +E + + KE Q + K ++ +I HE+ + ++ I+ +L A + + + G D+A V + W+GIPV +I+ E L+ +EE L +R+IGQ A+ ++S+A++R+RVGL++P+RP A+ +F GPTGVGKTEL K+L+ FG+E SM+RLDMSEYME+HTV+KLIGSPPGYVG G Sbjct: 363 GLRSKFEEHHTLSYHDKAVEQAAILADKFIADRFLPDKAIDVLDEAGSRVRLENRRLPRGMKRLLKELQDTLRDKEESIKEHDFDIAKQLVDHEMEVRTHIRIMK--------QSILTNETLGLARKEIDTVLEG--DVAEVIAGWTGIPVNKISDSESKRLLTMEETLHERLIGQHHAIVSVSKAIRRARVGLRNPDRPIASFIFAGPTGVGKTELTKALSEYMFGNEDSMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEG 614
BLAST of CK939005 vs. ExPASy Swiss-Prot
Match: CLPC_MYCTU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium tuberculosis GN=clpC PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.751e-49 Identity = 107/258 (41.47%), Postives = 156/258 (60.47%), Query Frame = 1 Query: 4 GLRXKYEAHXXCKFTLEAINAAVHLSARYISDRYLPDKAIDLVDEAGSRAHIELFKRKKEQQTCILSKPPDDYWQEIRTVQAMHEVVQGSRLKYDDVVASMGDTSEIVVESSLPS-----ASDDDEPAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPNRPTAAMLFCGPTGVGKTELAKSLAACYFGSESSMLRLDMSEYMERHTVSKLIGSPPGYVGV*RG 762 GLR +YEAH T A+ AA L+ RYI+DR+LPDKAIDL+DEAG+R I ++ PPD + + +A E + + AS+ D + +V + D D A V + IA V W+GIPV ++T E L+ +EE+L KR+IGQ++AV A+S+A++R+R GLKDP RP+ + +F GP+GVGKTEL+K+LA FG + +++++DM E+ +R T S+L G+PPGYVG G Sbjct: 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRR-----------MTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEG 607
BLAST of CK939005 vs. ExPASy Swiss-Prot
Match: CLPC_MYCBO (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium bovis GN=clpC PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.751e-49 Identity = 107/258 (41.47%), Postives = 156/258 (60.47%), Query Frame = 1 Query: 4 GLRXKYEAHXXCKFTLEAINAAVHLSARYISDRYLPDKAIDLVDEAGSRAHIELFKRKKEQQTCILSKPPDDYWQEIRTVQAMHEVVQGSRLKYDDVVASMGDTSEIVVESSLPS-----ASDDDEPAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPNRPTAAMLFCGPTGVGKTELAKSLAACYFGSESSMLRLDMSEYMERHTVSKLIGSPPGYVGV*RG 762 GLR +YEAH T A+ AA L+ RYI+DR+LPDKAIDL+DEAG+R I ++ PPD + + +A E + + AS+ D + +V + D D A V + IA V W+GIPV ++T E L+ +EE+L KR+IGQ++AV A+S+A++R+R GLKDP RP+ + +F GP+GVGKTEL+K+LA FG + +++++DM E+ +R T S+L G+PPGYVG G Sbjct: 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRR-----------MTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEG 607
BLAST of CK939005 vs. ExPASy Swiss-Prot
Match: CLPC_CHLMU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia muridarum GN=clpC PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.240e-48 Identity = 110/256 (42.97%), Postives = 153/256 (59.77%), Query Frame = 1 Query: 4 GLRXKYEAHXXCKFTLEAINAAVHLSARYISDRYLPDKAIDLVDEAGSRAHI-------ELFKRKKEQQTCILSKPPDDYWQEIRTVQAMHEVVQGSRLKYDDVVASMGDTSEIVVESSLPSASDDDEPAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPNRPTAAMLFCGPTGVGKTELAKSLAACYFGSESSMLRLDMSEYMERHTVSKLIGSPPGYVG 750 GL+ KYE H T EA+ AA LS +Y+ R+LPDKAIDL+DEAG+R + EL + + E ++ +K QE ++ + + R K ++ E E +P DE AV A V S+ +GIP ++T E L+ LE L+K+VIGQD+AVA+I RA++RSR G+KDPNRP + LF GPTGVGKT LA+ +A FG E S++++DMSEYME+ +K++GSPPGYVG Sbjct: 396 GLKKKYEEHHNVFITDEALVAAAKLSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPSELLRLEAEIESTKQAKEQAIGTQEYEKAASLRDEEKKLREKLSNMKQQWESNKE---EHQVPV----DEEAV------AQVVSVQTGIPAARLTEAESEKLLMLENTLQKKVIGQDQAVASICRAIRRSRTGIKDPNRPMGSFLFLGPTGVGKTLLAQQIAVEMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVG 638 HSP 2 Score: 30.4166 bits (67), Expect = 1.240e-48 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 734 PQVMLGYEEGGLLTEAIRRQPF 799 P +G+EEGG LTE +RR+P+ Sbjct: 633 PPGYVGHEEGGHLTEQVRRRPY 654
BLAST of CK939005 vs. ExPASy Swiss-Prot
Match: CLPB_STAAW (Chaperone protein clpB OS=Staphylococcus aureus (strain MW2) GN=clpB PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.240e-48 Identity = 113/309 (36.57%), Postives = 157/309 (50.81%), Query Frame = 1 Query: 4 GLRXKYEAHXXCKFTLEAINAAVHLSARYISDRYLPDKAIDLVDEAGSRAHIEL------------------------------------------FKRKKEQQTCILSKPP----------------DDYWQEIRTVQAMHEVVQGSRLKYDDVVASMGDTSEIVVESSLPSASDDDEPA--VVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPNRPTAAMLFCGPTGVGKTELAKSLAACYFGSESSMLRLDMSEYMERHTVSKLIGSPPGYVG 750 GL+ +YE + + A+ AA LS RYI+DR+LPDKAIDLVD+A + E+ +KE+Q + S+ D+ Q + Q + + + + L+Y + + E+ D D VV ++I + S W+GIPV ++ ER L+ L + L KRV+GQD+AV +S AV R+R G+KDPNRP + LF GPTGVGKTELAKSLAA F SE M+R+DMSEYME+H VS+LIG+PPGY+G Sbjct: 351 GLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDTDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIG 659 HSP 2 Score: 31.5722 bits (70), Expect = 1.240e-48 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 734 PQVMLGYEEGGLLTEAIRRQPF 799 P +G++EGG LTEA+RR P+ Sbjct: 654 PPGYIGHDEGGQLTEAVRRNPY 675
BLAST of CK939005 vs. ExPASy Swiss-Prot
Match: CLPB_STAAS (Chaperone protein clpB OS=Staphylococcus aureus (strain MSSA476) GN=clpB PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.240e-48 Identity = 113/309 (36.57%), Postives = 157/309 (50.81%), Query Frame = 1 Query: 4 GLRXKYEAHXXCKFTLEAINAAVHLSARYISDRYLPDKAIDLVDEAGSRAHIEL------------------------------------------FKRKKEQQTCILSKPP----------------DDYWQEIRTVQAMHEVVQGSRLKYDDVVASMGDTSEIVVESSLPSASDDDEPA--VVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPNRPTAAMLFCGPTGVGKTELAKSLAACYFGSESSMLRLDMSEYMERHTVSKLIGSPPGYVG 750 GL+ +YE + + A+ AA LS RYI+DR+LPDKAIDLVD+A + E+ +KE+Q + S+ D+ Q + Q + + + + L+Y + + E+ D D VV ++I + S W+GIPV ++ ER L+ L + L KRV+GQD+AV +S AV R+R G+KDPNRP + LF GPTGVGKTELAKSLAA F SE M+R+DMSEYME+H VS+LIG+PPGY+G Sbjct: 351 GLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDTDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIG 659 HSP 2 Score: 31.5722 bits (70), Expect = 1.240e-48 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 734 PQVMLGYEEGGLLTEAIRRQPF 799 P +G++EGG LTEA+RR P+ Sbjct: 654 PPGYIGHDEGGQLTEAVRRNPY 675
BLAST of CK939005 vs. ExPASy Swiss-Prot
Match: CLPB_STAAN (Chaperone protein clpB OS=Staphylococcus aureus (strain N315) GN=clpB PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.240e-48 Identity = 113/309 (36.57%), Postives = 157/309 (50.81%), Query Frame = 1 Query: 4 GLRXKYEAHXXCKFTLEAINAAVHLSARYISDRYLPDKAIDLVDEAGSRAHIEL------------------------------------------FKRKKEQQTCILSKPP----------------DDYWQEIRTVQAMHEVVQGSRLKYDDVVASMGDTSEIVVESSLPSASDDDEPA--VVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPNRPTAAMLFCGPTGVGKTELAKSLAACYFGSESSMLRLDMSEYMERHTVSKLIGSPPGYVG 750 GL+ +YE + + A+ AA LS RYI+DR+LPDKAIDLVD+A + E+ +KE+Q + S+ D+ Q + Q + + + + L+Y + + E+ D D VV ++I + S W+GIPV ++ ER L+ L + L KRV+GQD+AV +S AV R+R G+KDPNRP + LF GPTGVGKTELAKSLAA F SE M+R+DMSEYME+H VS+LIG+PPGY+G Sbjct: 351 GLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDTDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIG 659 HSP 2 Score: 31.5722 bits (70), Expect = 1.240e-48 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 734 PQVMLGYEEGGLLTEAIRRQPF 799 P +G++EGG LTEA+RR P+ Sbjct: 654 PPGYIGHDEGGQLTEAVRRNPY 675
BLAST of CK939005 vs. ExPASy Swiss-Prot
Match: CLPB_STAAM (Chaperone protein clpB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpB PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.240e-48 Identity = 113/309 (36.57%), Postives = 157/309 (50.81%), Query Frame = 1 Query: 4 GLRXKYEAHXXCKFTLEAINAAVHLSARYISDRYLPDKAIDLVDEAGSRAHIEL------------------------------------------FKRKKEQQTCILSKPP----------------DDYWQEIRTVQAMHEVVQGSRLKYDDVVASMGDTSEIVVESSLPSASDDDEPA--VVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPNRPTAAMLFCGPTGVGKTELAKSLAACYFGSESSMLRLDMSEYMERHTVSKLIGSPPGYVG 750 GL+ +YE + + A+ AA LS RYI+DR+LPDKAIDLVD+A + E+ +KE+Q + S+ D+ Q + Q + + + + L+Y + + E+ D D VV ++I + S W+GIPV ++ ER L+ L + L KRV+GQD+AV +S AV R+R G+KDPNRP + LF GPTGVGKTELAKSLAA F SE M+R+DMSEYME+H VS+LIG+PPGY+G Sbjct: 351 GLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDTDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIG 659 HSP 2 Score: 31.5722 bits (70), Expect = 1.240e-48 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 734 PQVMLGYEEGGLLTEAIRRQPF 799 P +G++EGG LTEA+RR P+ Sbjct: 654 PPGYIGHDEGGQLTEAVRRNPY 675
BLAST of CK939005 vs. ExPASy Swiss-Prot
Match: CLPB_STAAC (Chaperone protein clpB OS=Staphylococcus aureus (strain COL) GN=clpB PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.240e-48 Identity = 113/309 (36.57%), Postives = 157/309 (50.81%), Query Frame = 1 Query: 4 GLRXKYEAHXXCKFTLEAINAAVHLSARYISDRYLPDKAIDLVDEAGSRAHIEL------------------------------------------FKRKKEQQTCILSKPP----------------DDYWQEIRTVQAMHEVVQGSRLKYDDVVASMGDTSEIVVESSLPSASDDDEPA--VVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPNRPTAAMLFCGPTGVGKTELAKSLAACYFGSESSMLRLDMSEYMERHTVSKLIGSPPGYVG 750 GL+ +YE + + A+ AA LS RYI+DR+LPDKAIDLVD+A + E+ +KE+Q + S+ D+ Q + Q + + + + L+Y + + E+ D D VV ++I + S W+GIPV ++ ER L+ L + L KRV+GQD+AV +S AV R+R G+KDPNRP + LF GPTGVGKTELAKSLAA F SE M+R+DMSEYME+H VS+LIG+PPGY+G Sbjct: 351 GLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDTDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIG 659 HSP 2 Score: 31.5722 bits (70), Expect = 1.240e-48 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 734 PQVMLGYEEGGLLTEAIRRQPF 799 P +G++EGG LTEA+RR P+ Sbjct: 654 PPGYIGHDEGGQLTEAVRRNPY 675
BLAST of CK939005 vs. ExPASy Swiss-Prot
Match: HS101_ARATH (Heat shock protein 101 OS=Arabidopsis thaliana GN=HSP101 PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 1.615e-48 Identity = 119/304 (39.14%), Postives = 165/304 (54.28%), Query Frame = 1 Query: 4 GLRXKYEAHXXCKFTLEAINAAVHLSARYISDRYLPDKAIDLVDEAGSRAHIEL---------FKRKKEQQTCILS------------------KPPDDYWQ-----------------EIRTVQAMHEVV----QGSRLKYDDVVAS---MGDTSEIVVESSLPSASDDDEPAV----VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPNRPTAAMLFCGPTGVGKTELAKSLAACYFGSESSMLRLDMSEYMERHTVSKLIGSPPGYVG 750 GL+ KYE H + A+ A LSARYI+ R+LPDKAIDLVDEA + ++L +RK+ Q L K DD EIR ++ E + Q + +YD A+ G E+ + + +E + VGP+ IA V S W+GIPV ++ +E+ L+GL ++L KRV+GQ++AV A+S A+ RSR GL P +PT + LF GPTGVGKTELAK+LA F E+ ++R+DMSEYME+H+VS+LIG+PPGYVG Sbjct: 353 GLKEKYEGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQKREELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEHIAEVVSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 656 HSP 2 Score: 32.7278 bits (73), Expect = 1.615e-48 Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 2 Query: 734 PQVMLGYEEGGLLTEAIRRQPF 799 P +G+EEGG LTEA+RR+P+ Sbjct: 651 PPGYVGHEEGGQLTEAVRRRPY 672 The following BLAST results are available for this feature:
BLAST of CK939005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939005 ID=CK939005; Name=CK939005; organism=Citrus sinensis; type=EST; length=799bpback to top |