CX675591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.464e-15 Identity = 40/85 (47.06%), Postives = 64/85 (75.29%), Query Frame = -2 Query: 292 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 546 P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A A Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 626
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.464e-15 Identity = 40/85 (47.06%), Postives = 64/85 (75.29%), Query Frame = -2 Query: 292 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 546 P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A A Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 626
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.830e-15 Identity = 43/93 (46.24%), Postives = 65/93 (69.89%), Query Frame = -2 Query: 268 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSL 546 P+TA + LA A P++Q+ +LGE +YP++ ++ A K+TGMLLE+D +E+LH+LESPE+L +KV EA+ VL++ QA A + A SL Sbjct: 541 PLTA--SLLAGAPPQEQKQMLGERIYPVIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAVLQA---HQAKENAQKSAQPSL 628
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.614e-15 Identity = 42/90 (46.67%), Postives = 65/90 (72.22%), Query Frame = -2 Query: 277 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLAS 546 P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ QA A ++ S Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQA---HQAKEAAQKVVS 626
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.944e-15 Identity = 38/75 (50.67%), Postives = 60/75 (80.00%), Query Frame = -2 Query: 322 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 546 P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQA 625
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.299e-14 Identity = 39/81 (48.15%), Postives = 62/81 (76.54%), Query Frame = -2 Query: 304 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQA 546 P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEA 620
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.215e-14 Identity = 37/83 (44.58%), Postives = 62/83 (74.70%), Query Frame = -2 Query: 292 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 540 T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L++KV EA+ VL++ ++A A Sbjct: 539 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAKEATQKA 621
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.445e-14 Identity = 43/93 (46.24%), Postives = 64/93 (68.82%), Query Frame = -2 Query: 268 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSL 546 P+TA + LA A ++Q+ +LGE +YPL+ ++ A K+TGMLLE+D +E+LH+LESPE+L +KV EA+ VL++ QA A + A SL Sbjct: 541 PLTA--SLLAAAPLQEQKQILGERIYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAVLQA---HQAKESAPKSAPQSL 628
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.418e-14 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = -2 Query: 328 IPRRDASVGQPMPITALSTA--LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 582 +P R P P A LA A+P +Q+ +LGE+LYPL+ + + + A K+TGMLLEMD E+LHL+ES AL+ KV EA+ VL Sbjct: 555 MPARPHEQAAPAPQAGRLDAQSLARAAPAEQKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLVESQPALQEKVDEALRVL 641
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.199e-13 Identity = 47/115 (40.87%), Postives = 64/115 (55.65%), Query Frame = -2 Query: 259 ASVGQPMPITA---LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL---------RSVAQQQANNPADQLASLSLNEN 567 A G+P A + AL+ A P QQ+ +LGE+LYP ++ + + A K+TGMLLEM+ TE+L LLE EAL+AKV EA+ V S A +A P + S EN Sbjct: 649 APAGRPEEAVAGGLTAQALSAAPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMENTELLSLLEDEEALRAKVDEALNVYDEYMKNKGGESEATGEAAKPKEAAKETSTEEN 763 The following BLAST results are available for this feature:
BLAST of CX675591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675591 ID=CX675591; Name=CX675591; organism=Citrus sinensis; type=EST; length=835bpback to top |