CX675591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.307e-13 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = -2 Query: 331 ASVGQPMPITALST-ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 567 A G+ P L+ +LA A QQ+ +LGE+LYP ++ + + A K+TGMLLEMD TE+L LLE EAL+AKV EA+ V Sbjct: 639 AGRGEEAPAAGLTAQSLAAAPAPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLSLLEDDEALRAKVDEALSV 718
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.216e-12 Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = -2 Query: 289 PITALST-ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN--PAD 546 P AL+ AL A+P QQ+ +LGE+LYP ++ + + A K+TGMLLEMD TE+L LLE +AL+AKV EA+ V + + PAD Sbjct: 648 PAGALTAQALNAAAPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLGLLEDDDALRAKVDEALSVYDEYMKNKGEGEAPAD 736
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.073e-12 Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = -2 Query: 331 GIPRRDASVGQP-----------MPITALSTA--LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 585 G PR GQP +P T TA L P QQ+ +LGE+LYP ++ + + A K+TGMLLEMD TE+L LLE EAL+AKV EA+ V Sbjct: 620 GGPRPQGGRGQPAAAPPAAGREEVPATGGLTAQTLNAVPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLGLLEDEEALRAKVDEALSV 717
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.073e-12 Identity = 49/130 (37.69%), Postives = 66/130 (50.77%), Query Frame = -2 Query: 259 GIPRRDASVGQP-----------MPITALSTA--LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL--------RSVAQQQANNPADQLASLSLNEN 585 G PR GQP +P T TA L+ P QQ+ +LGE+LYP ++ + + A K+TGMLLEMD E+L LLE EAL+AKV EA+ V A ++ P + A + EN Sbjct: 622 GGPRPQGGRGQPAAAPPAAGREEVPATGGLTAQTLSAVPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNNELLGLLEDEEALRAKVDEALSVYDEYMKNKGEGEAPAESAKPKEDAAETATEEN 751
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.708e-12 Identity = 39/104 (37.50%), Postives = 62/104 (59.62%), Query Frame = -2 Query: 277 AGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLAS 588 AG P G P + A+A+ +P QQ+ +LGE+++P ++ + + A K+TGMLLEMD TE++ L+E+ AL++KV EA+ V +QQ + Q S Sbjct: 651 AGAPAGARGAGAPEGLQGQLAAVAD-NPGQQKQILGEAIFPKIQAIHPELAGKITGMLLEMDNTELVALVENDGALRSKVDEALAVYDDYVRQQGDGEGAQAPS 753
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.033e-12 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = -2 Query: 307 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 531 S A +P+QQ+ +LGE+L+P ++ L+ D A K+TGMLLEMD E+++LLE AL AKV EAM V + Q Sbjct: 681 SQLTATNNPQQQKQILGENLFPKIQALQPDLAGKITGMLLEMDNAELVNLLEDEAALVAKVNEAMAVYDEYVKSQ 755
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12 Identity = 36/75 (48.00%), Postives = 54/75 (72.00%), Query Frame = -2 Query: 322 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 546 P+TA + LA A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+ EA+ VL++ Sbjct: 530 PLTA--SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVLQA 602
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.292e-11 Identity = 32/66 (48.48%), Postives = 49/66 (74.24%), Query Frame = -2 Query: 331 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 528 + L+ A+P QQ+ +LGE+LYP + +++ + A K+TGMLLEMD +E+++L AL+AKV EAM V Sbjct: 653 SVLSAAAPGQQKQMLGEALYPKIHEMQPELAGKITGMLLEMDNSELINLTADESALRAKVDEAMSV 718
BLAST of CX675591 vs. ExPASy Swiss-Prot
Match: PABPX_ARATH (Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11 Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = -2 Query: 322 LLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 489 LLGE L+PLVE+LE A K+TGMLLEMD++E+L LL+SPE L +V EA EVL+S Sbjct: 528 LLGELLHPLVEKLEPQLANKITGMLLEMDKSELLLLLKSPEDLAVRVDEAFEVLKS 583 The following BLAST results are available for this feature:
BLAST of CX675591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675591 ID=CX675591; Name=CX675591; organism=Citrus sinensis; type=EST; length=835bpback to top |