FC921799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921799 vs. ExPASy Swiss-Prot
Match: RS5A_DROME (40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.564e-22 Identity = 53/71 (74.65%), Postives = 64/71 (90.14%), Query Frame = 3 Query: 3 VRRPALHVSPLRRVNQSISLLTIGAREASFPNIKSIAECLAEELIHAPKGSSHSYAIQEKDELERVAQSHR 215 VRR A+ VSPLRRVNQ+I LL GAREA+F NIK+IAECLA+ELI+A KGSS+SYAI++KDELERVA+S+R Sbjct: 158 VRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228
BLAST of FC921799 vs. ExPASy Swiss-Prot
Match: RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=2 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 1.249e-21 Identity = 53/71 (74.65%), Postives = 64/71 (90.14%), Query Frame = 3 Query: 3 VRRPALHVSPLRRVNQSISLLTIGAREASFPNIKSIAECLAEELIHAPKGSSHSYAIQEKDELERVAQSHR 215 VRR A+ VSPLRRVNQ+I LL GAREA+F NIK+IAECLA+ELI+A KGSS+SYAI++KDELERVA+S+R Sbjct: 134 VRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINARKGSSNSYAIKKKDELERVAKSNR 204
BLAST of FC921799 vs. ExPASy Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.249e-21 Identity = 50/71 (70.42%), Postives = 65/71 (91.55%), Query Frame = 3 Query: 3 VRRPALHVSPLRRVNQSISLLTIGAREASFPNIKSIAECLAEELIHAPKGSSHSYAIQEKDELERVAQSHR 215 VRR A+ +SPLRRVNQ+I L+T GAREA+F NIK+IAECLA+ELI+A KGSS+SYAI++KDE+ERVA+++R Sbjct: 137 VRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 207
BLAST of FC921799 vs. ExPASy Swiss-Prot
Match: RS5B_DROME (40S ribosomal protein S5b OS=Drosophila melanogaster GN=RpS5b PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.131e-21 Identity = 51/71 (71.83%), Postives = 64/71 (90.14%), Query Frame = 3 Query: 3 VRRPALHVSPLRRVNQSISLLTIGAREASFPNIKSIAECLAEELIHAPKGSSHSYAIQEKDELERVAQSHR 215 VRR A+ VSPLRRVNQ+I L+ GAREA+F NIK++AECLA+ELI+A KGSS+SYAI++KDELERVA+S+R Sbjct: 160 VRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 230
BLAST of FC921799 vs. ExPASy Swiss-Prot
Match: RS5_CAEEL (40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.783e-21 Identity = 51/71 (71.83%), Postives = 64/71 (90.14%), Query Frame = 3 Query: 3 VRRPALHVSPLRRVNQSISLLTIGAREASFPNIKSIAECLAEELIHAPKGSSHSYAIQEKDELERVAQSHR 215 VRR A+ V+PLRRVNQ+I LL GAREA+F N+K+IAECLA+ELI+A KGSS+SYAI++KDELERVA+S+R Sbjct: 140 VRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 210
BLAST of FC921799 vs. ExPASy Swiss-Prot
Match: RS5_NICPL (40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia GN=RPS5 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.199e-21 Identity = 49/71 (69.01%), Postives = 65/71 (91.55%), Query Frame = 3 Query: 3 VRRPALHVSPLRRVNQSISLLTIGAREASFPNIKSIAECLAEELIHAPKGSSHSYAIQEKDELERVAQSHR 215 VRR A+ +SPLRRV+Q+I LLT GARE++F NIK+IAECLA+ELI+A KGSS+SYAI++KDE+ERVA+++R Sbjct: 84 VRRQAVDISPLRRVSQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 154
BLAST of FC921799 vs. ExPASy Swiss-Prot
Match: RS5_DICDI (40S ribosomal protein S5 OS=Dictyostelium discoideum GN=rps5 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18 Identity = 44/71 (61.97%), Postives = 59/71 (83.10%), Query Frame = 3 Query: 3 VRRPALHVSPLRRVNQSISLLTIGAREASFPNIKSIAECLAEELIHAPKGSSHSYAIQEKDELERVAQSHR 215 VRR A+ VSP+RRVN ++ LLT G R A+F NI+++AECLA+ELI+A KGS +SY+I++KD LER A+SHR Sbjct: 120 VRRQAVDVSPMRRVNHAVYLLTQGTRAAAFRNIRTVAECLADELINASKGSPNSYSIKQKDALERTAKSHR 190
BLAST of FC921799 vs. ExPASy Swiss-Prot
Match: RS5_ENTHI (40S ribosomal protein S5 (Fragment) OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.340e-14 Identity = 37/71 (52.11%), Postives = 54/71 (76.06%), Query Frame = 3 Query: 3 VRRPALHVSPLRRVNQSISLLTIGAREASFPNIKSIAECLAEELIHAPKGSSHSYAIQEKDELERVAQSHR 215 VR A+ VSPLRR+N ++ LL +G R +F N KS+AECLA+E+++A K + S+AI +K++LERVA S+R Sbjct: 78 VRGQAVDVSPLRRINHALYLLIMGCRCGAFRNSKSLAECLADEIVNASKSYTGSFAIMKKEDLERVANSNR 148
BLAST of FC921799 vs. ExPASy Swiss-Prot
Match: RS7_AERPE (30S ribosomal protein S7P OS=Aeropyrum pernix GN=rps7p PE=3 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 1.384e-12 Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 3 Query: 9 RPALHVSPLRRVNQSISLLTIGAREASFPNIKSIAECLAEELIHAPKGSSHSYAIQEKDELERVAQSHR 215 R ++ V+P RRV+Q++ + GAR+ +F N K I ECLAEELI A +G SYAI++K+E+ER+A S R Sbjct: 137 RVSVDVAPQRRVDQALKFIADGARQCAFNNPKPIEECLAEELILAARGDPRSYAIRQKEEIERIALSSR 205
BLAST of FC921799 vs. ExPASy Swiss-Prot
Match: RS5_ENCCU (40S ribosomal protein S5 OS=Encephalitozoon cuniculi GN=RPS5 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.870e-12 Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 3 Query: 3 VRRPALHVSPLRRVNQSISLLTIGAREASFPNIKSIAECLAEELIHAPKGSSHSYAIQEKDELERVAQSHR 215 +RR ++ VSPL+R++ +IS L+ G R ASF N ++AE +A ELI A S +SYA+ +K E+ER+AQS+R Sbjct: 138 MRRTSVDVSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNKKKEIERIAQSNR 208 The following BLAST results are available for this feature:
BLAST of FC921799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921799 ID=FC921799; Name=FC921799; organism=Citrus sinensis; type=EST; length=323bpback to top |