CK938954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.614e-36 Identity = 71/221 (32.13%), Postives = 134/221 (60.63%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673 ++LL+E+ + SCGYE ++WG+++G++Y S+ ED T FK +H +GW S+Y P RP F G++ NL+D L Q RW+ G V++ +S++CP+ YG R+ LLE +AY + ++P+ + +PL + +P +C+L + PE+ + + F+ +F S + + E+ +G I+ W ++ W+I + L+ ++ L + +F+ T+K +D++ Sbjct: 741 ASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK-MHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITS-IPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 959
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.614e-36 Identity = 71/221 (32.13%), Postives = 134/221 (60.63%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673 ++LL+E+ + SCGYE ++WG+++G++Y S+ ED T FK +H +GW S+Y P RP F G++ NL+D L Q RW+ G V++ +S++CP+ YG R+ LLE +AY + ++P+ + +PL + +P +C+L + PE+ + + F+ +F S + + E+ +G I+ W ++ W+I + L+ ++ L + +F+ T+K +D++ Sbjct: 741 ASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK-MHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITS-IPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 959
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.025e-36 Identity = 76/224 (33.93%), Postives = 132/224 (58.93%), Query Frame = 2 Query: 8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676 S ++LL+E+ + SCGYE + WG+++G++Y S+ ED T FK +HC GWRS+Y P+ P F G++ NL+D L Q RW+ G V++ S +CPL YG + LE +Y + ++P + +PL + T+P +C+L G + PE+ + +S F+ +F+ + + E+ +G I W ++ W+I V+ L+ ++ + + SF+ T+K DDE+ Sbjct: 757 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFK-MHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFTS-IPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSKGGDDEE 978
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 7.870e-36 Identity = 74/219 (33.79%), Postives = 130/219 (59.36%), Query Frame = 2 Query: 20 LLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673 LL+E+ + SCGYE S WG ++G++Y S+ ED T FK +H +GWRS+Y P+ P F G++ NL+D L Q RW+ G V++ S++CP+ YG R+ LE AY + ++P+ + +PL + T+P +C+ + P++ + +S F+ +FLS + + E+ +G I W ++ W+I V+ L+ I+ L + +F+ T+K +D++ Sbjct: 733 LLKEAIHVISCGYEDKSDWGMEIGWIYGSVTEDILTGFK-MHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITS-IPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 949
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35 Identity = 82/227 (36.12%), Postives = 136/227 (59.91%), Query Frame = 2 Query: 2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKI---WRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADD 670 N + ++LL+ES + SCGYE ++WG+++G++Y S+ ED T FK +HC GWRSVY P+R F G++ NL+D L Q RW+ G V++ +S++CP+ YG + LE +Y + ++P + LPL + ++P +C+L G + PE+ + + +F+ +F+S + E+ G I I WRNEQ W+I V+ L+ ++ L +F+ T+K ADD Sbjct: 750 NVNPASLLRESIQVISCGYEEKTEWGKEIGWIYGSVTEDILTGFK-MHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTS-LPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEM--QWGKIGIDDWWRNEQ-FWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADD 971
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.753e-35 Identity = 75/224 (33.48%), Postives = 132/224 (58.93%), Query Frame = 2 Query: 8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676 S ++LL+E+ + SCGYE + WG+++G++Y S+ ED T FK +HC GWRS+Y P+R F G++ NL+D L Q RW+ G +++ S +CPL YG + LE +Y + ++P + +PL + T+P +C+L G + PE+ + +S F+ +F+ + + E+ +G I W ++ W+I V+ L+ ++ + + SF+ T+K DDE+ Sbjct: 756 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFK-MHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTS-IPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEE 977
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.753e-35 Identity = 75/224 (33.48%), Postives = 132/224 (58.93%), Query Frame = 2 Query: 8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676 S ++LL+E+ + SCGYE + WG+++G++Y S+ ED T FK +HC GWRS+Y P+R F G++ NL+D L Q RW+ G +++ S +CPL YG + LE +Y + ++P + +PL + T+P +C+L G + PE+ + +S F+ +F+ + + E+ +G I W ++ W+I V+ L+ ++ + + SF+ T+K DDE+ Sbjct: 756 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFK-MHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTS-IPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEE 977
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35 Identity = 76/224 (33.93%), Postives = 131/224 (58.48%), Query Frame = 2 Query: 2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADD 670 N S + LL+E+ + SCGYE ++WG+++G++Y S+ ED T FK +HC GWRSVY P+R F G++ NL+D L Q RW+ G V++ +S++CP+ YG + LE +Y + ++P + LPL + ++P +C+L G + PE+ + + +F+ +F+S + E+ G I W ++ W+I + L+ ++ L +F+ T+K ADD Sbjct: 746 NASPACLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK-MHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTS-LPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADD 967
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 6.662e-35 Identity = 81/227 (35.68%), Postives = 137/227 (60.35%), Query Frame = 2 Query: 2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKI---WRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADD 670 N S ++LL+E+ + SCGYE ++WG+++G++Y S+ ED T FK +H GWRSVY P+ P F G++ NL+D L Q RW+ G V++ +S++CP+ YG + LE ++Y + ++P + +PL + ++P +C+L G + PE+ + +S +F+ +F S + E+ G + I WRNEQ W+I V+ L+ ++ L E +F+ T+K ADD Sbjct: 732 NASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK-MHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTS-IPLLVYCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEM--QWGKVGIDDWWRNEQ-FWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADD 953
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.136e-34 Identity = 68/220 (30.91%), Postives = 132/220 (60.00%), Query Frame = 2 Query: 17 TLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673 TLL+E+ + SCGYE+ + WG+++G++Y S+ ED T FK +H +GW S+Y P RP F G++ NL+D L Q RW+ G +++ +S++CP+ YG R+ LLE +AY + ++P+ + +PL + +P C++ + PE+ + +S F+ +F S + + E+ + +++ W ++ W+I + L+ ++ + +F+ T+K +D++ Sbjct: 734 TLLKEAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFK-MHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITS-IPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQGLLKVFAGIDTNFTVTSKASDED 951 The following BLAST results are available for this feature:
BLAST of CK938954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938954 ID=CK938954; Name=CK938954; organism=Citrus sinensis; type=EST; length=720bpback to top |