CK938954

Overview
NameCK938954
Unique NameCK938954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.614e-36
Identity = 71/221 (32.13%), Postives = 134/221 (60.63%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673
            ++LL+E+  + SCGYE  ++WG+++G++Y S+ ED  T FK +H +GW S+Y  P RP F G++  NL+D L Q  RW+ G V++ +S++CP+ YG   R+ LLE +AY +  ++P+ + +PL  +  +P +C+L    + PE+ + +   F+ +F S  +  + E+  +G  I+ W   ++ W+I   +  L+     ++  L   + +F+ T+K +D++
Sbjct:  741 ASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK-MHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITS-IPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 959          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.614e-36
Identity = 71/221 (32.13%), Postives = 134/221 (60.63%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673
            ++LL+E+  + SCGYE  ++WG+++G++Y S+ ED  T FK +H +GW S+Y  P RP F G++  NL+D L Q  RW+ G V++ +S++CP+ YG   R+ LLE +AY +  ++P+ + +PL  +  +P +C+L    + PE+ + +   F+ +F S  +  + E+  +G  I+ W   ++ W+I   +  L+     ++  L   + +F+ T+K +D++
Sbjct:  741 ASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK-MHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITS-IPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 959          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.025e-36
Identity = 76/224 (33.93%), Postives = 132/224 (58.93%), Query Frame = 2
Query:    8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676
            S ++LL+E+  + SCGYE  + WG+++G++Y S+ ED  T FK +HC GWRS+Y  P+ P F G++  NL+D L Q  RW+ G V++  S +CPL YG    +  LE  +Y +  ++P  + +PL  + T+P +C+L G  + PE+ + +S  F+ +F+   +  + E+  +G  I  W   ++ W+I  V+  L+     ++  +   + SF+ T+K  DDE+
Sbjct:  757 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFK-MHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFTS-IPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSKGGDDEE 978          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 7.870e-36
Identity = 74/219 (33.79%), Postives = 130/219 (59.36%), Query Frame = 2
Query:   20 LLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673
            LL+E+  + SCGYE  S WG ++G++Y S+ ED  T FK +H +GWRS+Y  P+ P F G++  NL+D L Q  RW+ G V++  S++CP+ YG   R+  LE  AY +  ++P+ + +PL  + T+P +C+     + P++ + +S  F+ +FLS  +  + E+  +G  I  W   ++ W+I  V+  L+     I+  L   + +F+ T+K +D++
Sbjct:  733 LLKEAIHVISCGYEDKSDWGMEIGWIYGSVTEDILTGFK-MHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITS-IPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 949          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 82/227 (36.12%), Postives = 136/227 (59.91%), Query Frame = 2
Query:    2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKI---WRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADD 670
            N + ++LL+ES  + SCGYE  ++WG+++G++Y S+ ED  T FK +HC GWRSVY  P+R  F G++  NL+D L Q  RW+ G V++ +S++CP+ YG    +  LE  +Y +  ++P  + LPL  + ++P +C+L G  + PE+ + +  +F+ +F+S     + E+    G I I   WRNEQ  W+I  V+  L+     ++  L     +F+ T+K ADD
Sbjct:  750 NVNPASLLRESIQVISCGYEEKTEWGKEIGWIYGSVTEDILTGFK-MHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTS-LPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEM--QWGKIGIDDWWRNEQ-FWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADD 971          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.753e-35
Identity = 75/224 (33.48%), Postives = 132/224 (58.93%), Query Frame = 2
Query:    8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676
            S ++LL+E+  + SCGYE  + WG+++G++Y S+ ED  T FK +HC GWRS+Y  P+R  F G++  NL+D L Q  RW+ G +++  S +CPL YG    +  LE  +Y +  ++P  + +PL  + T+P +C+L G  + PE+ + +S  F+ +F+   +  + E+  +G  I  W   ++ W+I  V+  L+     ++  +   + SF+ T+K  DDE+
Sbjct:  756 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFK-MHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTS-IPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEE 977          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.753e-35
Identity = 75/224 (33.48%), Postives = 132/224 (58.93%), Query Frame = 2
Query:    8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676
            S ++LL+E+  + SCGYE  + WG+++G++Y S+ ED  T FK +HC GWRS+Y  P+R  F G++  NL+D L Q  RW+ G +++  S +CPL YG    +  LE  +Y +  ++P  + +PL  + T+P +C+L G  + PE+ + +S  F+ +F+   +  + E+  +G  I  W   ++ W+I  V+  L+     ++  +   + SF+ T+K  DDE+
Sbjct:  756 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFK-MHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTS-IPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEE 977          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35
Identity = 76/224 (33.93%), Postives = 131/224 (58.48%), Query Frame = 2
Query:    2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADD 670
            N S + LL+E+  + SCGYE  ++WG+++G++Y S+ ED  T FK +HC GWRSVY  P+R  F G++  NL+D L Q  RW+ G V++ +S++CP+ YG    +  LE  +Y +  ++P  + LPL  + ++P +C+L G  + PE+ + +  +F+ +F+S     + E+   G  I  W   ++ W+I   +  L+     ++  L     +F+ T+K ADD
Sbjct:  746 NASPACLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK-MHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTS-LPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADD 967          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.662e-35
Identity = 81/227 (35.68%), Postives = 137/227 (60.35%), Query Frame = 2
Query:    2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKI---WRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADD 670
            N S ++LL+E+  + SCGYE  ++WG+++G++Y S+ ED  T FK +H  GWRSVY  P+ P F G++  NL+D L Q  RW+ G V++ +S++CP+ YG    +  LE ++Y +  ++P  + +PL  + ++P +C+L G  + PE+ + +S +F+ +F S     + E+    G + I   WRNEQ  W+I  V+  L+     ++  L   E +F+ T+K ADD
Sbjct:  732 NASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK-MHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTS-IPLLVYCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEM--QWGKVGIDDWWRNEQ-FWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADD 953          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.136e-34
Identity = 68/220 (30.91%), Postives = 132/220 (60.00%), Query Frame = 2
Query:   17 TLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673
            TLL+E+  + SCGYE+ + WG+++G++Y S+ ED  T FK +H +GW S+Y  P RP F G++  NL+D L Q  RW+ G +++ +S++CP+ YG   R+ LLE +AY +  ++P+ + +PL  +  +P  C++    + PE+ + +S  F+ +F S  +  + E+  +  +++ W   ++ W+I   +  L+     ++      + +F+ T+K +D++
Sbjct:  734 TLLKEAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFK-MHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITS-IPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQGLLKVFAGIDTNFTVTSKASDED 951          
The following BLAST results are available for this feature:
BLAST of CK938954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA1_ORYSJ4.614e-3632.13Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI4.614e-3632.13Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA3_ORYSJ6.025e-3633.93Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA3_ARATH7.870e-3633.79Cellulose synthase A catalytic subunit 3 [UDP-form... [more]
CESA9_ARATH1.342e-3536.12Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA5_ORYSJ1.753e-3533.48Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ORYSI1.753e-3533.48Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA2_ARATH2.290e-3533.93Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CESA5_ARATH6.662e-3535.68Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CESAA_ARATH1.136e-3430.91Probable cellulose synthase A catalytic subunit 10... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_B05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938954 ID=CK938954; Name=CK938954; organism=Citrus sinensis; type=EST; length=720bp
TAATGATTCATCAAGCACTTTGCTACAAGAGAGCAAATTTTTGGCCTCAT
GTGGCTATGAAAGTAACTCAAAATGGGGTGAAAAGGTTGGTTTTATGTAT
CATTCTCTTGTTGAAGATTACTTCACGNGATTTAAACAACTACACTGCAA
AGGATGGAGATCGGTGTATCTTAACCCGGAAAGGCCGCAATTTTTGGGCA
CTTCTACAACAAACTTAAATGACTCGTTGGTTCAAGGCACGAGATGGAGT
TCGGGATTGGTTCAAGTAGCAATCTCAAAGTATTGCCCTCTGATATATGG
ACCACCGAGGATGTCTTTGCTTGAAAGCATGGCCTATGCTGACCTTGGAA
TGTTCCCTCTTCTTAATTGCTTGCCTCTGTGGTGCTTTGCCACTGTCCCT
CATCTCTGCGTATTGCATGGCATCCCATTGTACCCTGAGGTTTTAAGTTC
ATCTTCCCCCATATTCGTATTCGTTTTCCTATCGGCGCTTTCTAAACATC
TATACGAGGTTCTTTCAACTGGTGGATCAATCAAGATATGGAGAAATGAA
CAGAGAATATGGATGATAAGGGCAGTCACATGCCAACTTTATGGAAGCTT
AAATGCCATTATGCACAAGCTTGGCTTAGCTGAAGCCAGTTTCTCGGCCA
CAAATAAAGTCGCGGATGATGAACAAGTGAAGCTCTACGGAATGGGCAAG
TTCGATTTCCGAACATCAAA
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