CK938954

Overview
NameCK938954
Unique NameCK938954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.366e-34
Identity = 80/227 (35.24%), Postives = 135/227 (59.47%), Query Frame = 2
Query:    2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKI---WRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADD 670
            N S + LL+E+  + SCGYE  ++WG+++G++Y S+ ED  T FK +H  GWRSVY  P+   F G++  NL+D L Q  RW+ G V++ +S++CP+ YG    +  LE ++Y +  ++P  + LPL  + ++P +C+L G  + PE+ + +S +F+ +F S     + E+    G + I   WRNEQ  W+I  V+  L+     ++  L   + +F+ T+K ADD
Sbjct:  747 NASPACLLKEAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK-MHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTS-LPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEM--QWGKVGIDDWWRNEQ-FWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADD 968          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25
Identity = 63/221 (28.51%), Postives = 123/221 (55.66%), Query Frame = 2
Query:   29 ESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNC-LPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLY 688
            E+  + SC YE  ++WG++VG++Y S+ ED  T ++ +H +GWRSVY   +R  FLGT+  NL D L Q  RW++G V++  S+    +    ++ LL+ ++Y ++G++P  +  L ++CF  +P L +  G  +  ++  +     + + ++ ++  + EV  +G  ++ W   ++ W+I   +  LY  +  ++  +   E SF+ T K A D+   +Y
Sbjct:  818 EAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYR-MHNRGWRSVYCITKRDAFLGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFL-ASRKLMLLQRISYLNVGIYPFTSIFLLVYCF--IPALSLFSGFFIVQKLDIAFLCYLLTMTITLVALGILEVKWSGIELEDWWRNEQFWLISGTSAHLYAVVQGLLKVMAGIEISFTLTAKAAADDNEDIY 1034          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25
Identity = 75/230 (32.61%), Postives = 122/230 (53.04%), Query Frame = 2
Query:   23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPL-WCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVF-LSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVA------DDEQVKLY 688
            + E+  + SC YE  ++WG  VG++Y S+ ED  T F+ +H KGWRS Y   E   F G++  NL D L Q  RW++G V++  S+    I+  P++ LL+ +AY ++G++P  +   L +CF  +P L +  G     E L+ S  I++ +  LS     + EV  +G S++ W   ++ W+I   +  L   L  I+  +   E SF+ T+K +      DDE   LY
Sbjct:  652 VNEAVNVISCWYEDKTEWGFNVGWIYGSVTEDVVTGFR-MHEKGWRSFYCVTEPDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRN-NAIFAGPKLKLLQRIAYLNVGIYPFTSIFILTYCF--LPPLSLFSG-HFVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWRNEQFWLIGGTSAHLVAVLQGILKVIAGVEISFTLTSKSSTGGDDEDDEFADLY 876          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25
Identity = 65/226 (28.76%), Postives = 119/226 (52.65%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNC-LPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLY 688
            +T + ES  + SC YE  ++WG++VG++Y S+ ED  T ++ +H +GWRSVY   +R  F G++  NL D L Q  RW++G V++  S+    I    R+  L+ +AY ++G++P  +  L L+CF  +P   +  G  +   +  S     + + +  +   + EV  +G  ++ W   ++ W+I   +  LY  +  ++  +   E SF+ T K   D+   +Y
Sbjct:  775 ATTVAESVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYR-MHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVLRWATGSVEIFFSRN-NAILASKRLKFLQRLAYLNVGIYPFTSLFLILYCF--LPAFSLFSGQFIVRTLSISFLVYLLMITICLIGLAVLEVKWSGIGLEEWWRNEQWWLISGTSSHLYAVVQGVLKVIAGIEISFTLTTKSGGDDNEDIY 996          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25
Identity = 67/223 (30.04%), Postives = 126/223 (56.50%), Query Frame = 2
Query:   29 ESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNC-LPLWCFATVPHLCVLHG--IPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLY 688
            E+  + SC YE N++WG+++G++Y S+ ED  T ++ +H +GWRSVY   +R  F GT+  NL D L Q  RW++G V++  SK    ++   R+  L+ +AY ++G++P  +  L ++CF  +P LC+  G  I    ++   S  + + V L+ +S  L EV  +G  ++ W   ++ W+I   +  L   +  ++  +   E SF+ T+K + +++  ++
Sbjct:  712 EAIAVISCWYEDNTEWGDRIGWIYGSVTEDVVTGYR-MHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKN-NAMFATRRLKFLQRVAYLNVGIYPFTSIFLVVYCF--LPALCLFSGKFIVQSLDIHFLSYLLCITVTLTLIS--LLEVKWSGIGLEEWWRNEQFWLIGGTSAHLAAVVQGLLKVIAGIEISFTLTSKASGEDEDDIF 928          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 69/224 (30.80%), Postives = 117/224 (52.23%), Query Frame = 2
Query:   29 ESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVA----DDEQVKLY 688
            ES  + SC YE N++WG++VG++Y S+ ED  T ++ +H +GWRSVY    R  F GT+  NL D L Q  RW++G V++  SK    +    R+  L+ MAY ++G++P  + L L  +  +P L +  G  +   +  +     + + ++ +   L EV  +G  ++ W   ++ W+I   +  L   L  ++  +   E SF+ T K A    DD   +LY
Sbjct:  688 ESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYR-MHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKN-NAVLASRRLKFLQRMAYLNVGIYPFTS-LFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPFAELY 908          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 69/224 (30.80%), Postives = 117/224 (52.23%), Query Frame = 2
Query:   29 ESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVA----DDEQVKLY 688
            ES  + SC YE N++WG++VG++Y S+ ED  T ++ +H +GWRSVY    R  F GT+  NL D L Q  RW++G V++  SK    +    R+  L+ MAY ++G++P  + L L  +  +P L +  G  +   +  +     + + ++ +   L EV  +G  ++ W   ++ W+I   +  L   L  ++  +   E SF+ T K A    DD   +LY
Sbjct:  688 ESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYR-MHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKN-NAVLASRRLKFLQRMAYLNVGIYPFTS-LFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPFAELY 908          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24
Identity = 65/230 (28.26%), Postives = 123/230 (53.48%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLN-CLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKV----ADDEQVKLY 688
            ++ + E+  + SC YE  ++WG ++G++Y S+ ED  T ++ +H +GW+SVY   +R  F GT+  NL D L Q  RW++G V++  S+     +  PRM +L+ +AY ++G++P  +  L ++CF  +P L +  G  +   +  +     + + ++     L E+  +G S++ W   ++ W+I   +  L   +  ++  +   E SF+ T+K      DDE   LY
Sbjct:  814 ASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYR-MHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN-NAFFASPRMKILQRIAYLNVGIYPFTSFFLIVYCF--LPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVIQGLLKVVAGIEISFTLTSKSGGEDVDDEFADLY 1039          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24
Identity = 67/230 (29.13%), Postives = 124/230 (53.91%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNC-LPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK----VADDEQVKLY 688
            ++ + E+  + SC YE  ++WG++VG++Y S+ ED  T ++ +H +GW+SVY   +R  F GT+  NL D L Q  RW++G V++  S+   L+    +M  L+ +AY ++G++P  +  L ++CF  +P L +  G  +   +  +     + + L+     + E+  +G S++ W   ++ W+I   +  L   L  ++  +   E SF+ T+K     ADDE   LY
Sbjct:  839 ASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYR-MHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL-ASRKMKFLQRIAYLNVGIYPFTSIFLIVYCF--LPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLY 1064          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24
Identity = 67/230 (29.13%), Postives = 124/230 (53.91%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNC-LPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK----VADDEQVKLY 688
            ++ + E+  + SC YE  ++WG++VG++Y S+ ED  T ++ +H +GW+SVY   +R  F GT+  NL D L Q  RW++G V++  S+   L+    +M  L+ +AY ++G++P  +  L ++CF  +P L +  G  +   +  +     + + L+     + E+  +G S++ W   ++ W+I   +  L   L  ++  +   E SF+ T+K     ADDE   LY
Sbjct:  839 ASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYR-MHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL-ASRKMKFLQRIAYLNVGIYPFTSIFLIVYCF--LPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLY 1064          
The following BLAST results are available for this feature:
BLAST of CK938954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA6_ARATH7.366e-3435.24Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CSLD3_ORYSJ2.805e-2528.51Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLD6_ARATH4.785e-2532.61Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLD4_ARATH4.785e-2528.76Cellulose synthase-like protein D4 OS=Arabidopsis ... [more]
CSLD1_ARATH4.785e-2530.04Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLD5_ORYSJ1.818e-2430.80Cellulose synthase-like protein D5 OS=Oryza sativa... [more]
CSLD5_ORYSI1.818e-2430.80Putative cellulose synthase-like protein D5 OS=Ory... [more]
CSLD3_ARATH5.291e-2428.26Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLD2_ORYSJ9.025e-2429.13Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ORYSI9.025e-2429.13Cellulose synthase-like protein D2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_B05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938954 ID=CK938954; Name=CK938954; organism=Citrus sinensis; type=EST; length=720bp
TAATGATTCATCAAGCACTTTGCTACAAGAGAGCAAATTTTTGGCCTCAT
GTGGCTATGAAAGTAACTCAAAATGGGGTGAAAAGGTTGGTTTTATGTAT
CATTCTCTTGTTGAAGATTACTTCACGNGATTTAAACAACTACACTGCAA
AGGATGGAGATCGGTGTATCTTAACCCGGAAAGGCCGCAATTTTTGGGCA
CTTCTACAACAAACTTAAATGACTCGTTGGTTCAAGGCACGAGATGGAGT
TCGGGATTGGTTCAAGTAGCAATCTCAAAGTATTGCCCTCTGATATATGG
ACCACCGAGGATGTCTTTGCTTGAAAGCATGGCCTATGCTGACCTTGGAA
TGTTCCCTCTTCTTAATTGCTTGCCTCTGTGGTGCTTTGCCACTGTCCCT
CATCTCTGCGTATTGCATGGCATCCCATTGTACCCTGAGGTTTTAAGTTC
ATCTTCCCCCATATTCGTATTCGTTTTCCTATCGGCGCTTTCTAAACATC
TATACGAGGTTCTTTCAACTGGTGGATCAATCAAGATATGGAGAAATGAA
CAGAGAATATGGATGATAAGGGCAGTCACATGCCAACTTTATGGAAGCTT
AAATGCCATTATGCACAAGCTTGGCTTAGCTGAAGCCAGTTTCTCGGCCA
CAAATAAAGTCGCGGATGATGAACAAGTGAAGCTCTACGGAATGGGCAAG
TTCGATTTCCGAACATCAAA
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