CK938954

Overview
NameCK938954
Unique NameCK938954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23
Identity = 64/232 (27.59%), Postives = 125/232 (53.88%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNC-LPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKV----ADDEQVKLYGM 694
            ++++ E+  + SC YE  ++WG +VG++Y S+ ED  T ++ +H +GW+SVY    R  F GT+  NL D L Q  RW++G V++  S+   L +   +M +L+ +AY ++G++P  +  L ++CF  +P L +  G  +   +  +     + + ++     + E+  +G +++ W   ++ W+I   +  L   L  ++  +   E SF+ T+K      DDE  +LY +
Sbjct:  794 ASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYR-MHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL-FASSKMKVLQRIAYLNVGIYPFTSVFLIVYCF--LPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAV 1021          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23
Identity = 64/232 (27.59%), Postives = 125/232 (53.88%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNC-LPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKV----ADDEQVKLYGM 694
            ++++ E+  + SC YE  ++WG +VG++Y S+ ED  T ++ +H +GW+SVY    R  F GT+  NL D L Q  RW++G V++  S+   L +   +M +L+ +AY ++G++P  +  L ++CF  +P L +  G  +   +  +     + + ++     + E+  +G +++ W   ++ W+I   +  L   L  ++  +   E SF+ T+K      DDE  +LY +
Sbjct:  794 ASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYR-MHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL-FASSKMKVLQRIAYLNVGIYPFTSVFLIVYCF--LPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAV 1021          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23
Identity = 65/230 (28.26%), Postives = 123/230 (53.48%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNC-LPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVA----DDEQVKLY 688
            ++ + E+  + SC YE  ++WG ++G++Y S+ ED  T ++ +H +GW+SVY   +R  F GT+  NL D L Q  RW++G V++  S+   L+    +M +L+ +AY ++G++P  +  L ++CF  +P L +  G  +   +  +     + + ++     L E+  +G S++ W   ++ W+I   +  L   L  ++  +   E SF+ T+K      DDE   LY
Sbjct:  814 ASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYR-MHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL-ASSKMKILQRIAYLNVGIYPFTSIFLIVYCF--LPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGVEISFTLTSKSGGDDIDDEFADLY 1039          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 60/205 (29.27%), Postives = 109/205 (53.17%), Query Frame = 2
Query:   47 SCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVY-LNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658
            SC YE  ++WG ++G++Y S+ ED  T ++ +H +GWRSVY + P R  F GT+  NL D L Q  RW++G V++  S+   L +  PRM LL+ +AY + GM+P  +   L  +  +P + +  G  +   + ++     + + L+     L E+  +G ++  W   ++ W+I   +      L  ++  +   + SF+ T+K
Sbjct:  882 SCFYEEKTEWGRRIGWIYGSVTEDVVTGYR-MHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL-FASPRMKLLQRVAYFNAGMYPFTSVF-LLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSK 1083          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.303e-22
Identity = 59/217 (27.19%), Postives = 113/217 (52.07%), Query Frame = 2
Query:   23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI-YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKH----LYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658
            ++ ++ +  C YE  + WG  +G++Y S+ ED  T    +H +GW S Y++P+ P FLG+    + ++L+Q  RW++G +++  +K  PL      ++   + +AY  L +   L  +P   +  +P  C+LH   L+P+ L      ++ + ++ +  H    L+E +S G S++ W   Q +W I A +  L+   +  +  LG++E  F  T K
Sbjct:  431 IEAAREVGHCQYEYQTSWGNTIGWLYDSVAEDLNTSIG-IHSRGWTSSYISPDTPAFLGSMPAGVPEALLQQRRWATGWIEILFNKQSPLRGLFSKKIRFRQRLAY--LCIITCLRSIPELIYCLLPAYCLLHNSTLFPKGL------YLGITVTLVGIHCLYTLWEFMSLGYSVQSWLVSQSVWRIVATSSWLFSIFDITLKLLGISETVFIITKK 638          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22
Identity = 68/231 (29.44%), Postives = 120/231 (51.95%), Query Frame = 2
Query:   29 ESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYP-EVLSSSSPIFVFVFLSALS-----KHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVA-----DDEQVKLY 688
            E+  + SC YE  ++WG++VG++Y S+ ED  T ++ +H +GWRS+Y   +R  F GT+  NL D L Q  RW++G V++  S+    I+   RM  L+ +AY ++GM+P  +      F  V   C+L  I L+  + +  S  I   ++L +++       L E+  +G ++  W   ++ W+I   +      L  ++  +   + SF+ T+K +     DDE   LY
Sbjct:  855 EAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYR-MHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN-NAIFATRRMKFLQRVAYFNVGMYPFTS-----LFLIV--YCILPAISLFSGQFIVQSLDITFLIYLLSITLTLCMLSLLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSSAPEDGDDEFADLY 1076          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21
Identity = 59/217 (27.19%), Postives = 113/217 (52.07%), Query Frame = 2
Query:   23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI-YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKH----LYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658
            L+ ++ +  C +E  + WG+ +G++Y S  ED  T    +H +GW S Y++P+ P FLG       ++++Q  RW++GL++V  +K  PLI     ++   +S+AY  +  +  L  +P   +  +P  C+LH   L+P+       +++ + ++ +  H    L+E +S G S++ W   Q  W I+     L+   + I+  LG+++  F  T K
Sbjct:  430 LEAAQEVGHCHFEYQTSWGKTIGWLYESTAEDANTSIG-IHSRGWTSSYISPKPPAFLGAMPPGGPEAMLQQRRWATGLLEVLFNKQSPLIGMFCRKIRFRQSLAYLYIFTWG-LRSIPELIYCLLPAYCLLHNAALFPK------GVYLGIVVTLVGMHCLYSLWEFMSLGFSVQSWFASQSFWRIKTTCSWLFSIPDIILKLLGISKTVFIVTKK 638          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21
Identity = 62/216 (28.70%), Postives = 109/216 (50.46%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGP-PRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658
            S+ ++ +K ++SC YES + WG +VG+ Y S+ ED  T  +++H  GWRS  L  E P FLG + T     L Q  RW++GL ++ IS+  PL+      +   + +AY  L ++ +   + L C+  +   C+L       +   +   I + +FL+  + +  E +  G S++ W N  R+  I + +  L      ++  +GL+E  F  T K
Sbjct:  467 SSHIEVAKEVSSCNYESGTHWGLEVGWAYGSMTEDILTG-QRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWATGLFEILISQNNPLLLSIFKHLQFRQCLAYLTLYVWAVRGFVEL-CYELLVPYCLLTNQSFLSKASENCFNITLALFLTYNTYNFVEYMECGLSVRAWWNNHRMQRIISASAWLLAFFTVLLKTIGLSETVFEVTRK 680          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21
Identity = 65/237 (27.43%), Postives = 118/237 (49.79%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGP-PRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK----VADDEQVKLYGMGKFDF 709
            S+ ++ +K +++C Y+  + WG++VG++Y SL ED  T  +++H  GWRSV +  E P F+G++       L Q  RW++G  ++ IS+  P++     R+   + +AY  +  +PL     L C+  +   C+L      P+       + + +F+S  + +  E ++ G S + W N  R+  I +V+      L  ++  LGL+E  F  T K      DD+       G+F F
Sbjct:  436 SSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTG-QRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFEL-CYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTF 670          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21
Identity = 65/237 (27.43%), Postives = 118/237 (49.79%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGP-PRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK----VADDEQVKLYGMGKFDF 709
            S+ ++ +K +++C Y+  + WG++VG++Y SL ED  T  +++H  GWRSV +  E P F+G++       L Q  RW++G  ++ IS+  P++     R+   + +AY  +  +PL     L C+  +   C+L      P+       + + +F+S  + +  E ++ G S + W N  R+  I +V+      L  ++  LGL+E  F  T K      DD+       G+F F
Sbjct:  436 SSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTG-QRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFEL-CYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTF 670          
The following BLAST results are available for this feature:
BLAST of CK938954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLD1_ORYSJ1.179e-2327.59Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI1.179e-2327.59Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD2_ARATH2.011e-2328.26Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD4_ORYSJ5.850e-2329.27Cellulose synthase-like protein D4 OS=Oryza sativa... [more]
CSLB1_ARATH1.303e-2227.19Cellulose synthase-like protein B1 OS=Arabidopsis ... [more]
CSLD5_ARATH3.792e-2229.44Cellulose synthase-like protein D5 OS=Arabidopsis ... [more]
CSLB3_ARATH1.103e-2127.19Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLH3_ORYSJ1.882e-2128.70Putative cellulose synthase-like protein H3 OS=Ory... [more]
CSLH2_ORYSJ1.882e-2127.43Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CSLH2_ORYSI1.882e-2127.43Cellulose synthase-like protein H2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_B05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938954 ID=CK938954; Name=CK938954; organism=Citrus sinensis; type=EST; length=720bp
TAATGATTCATCAAGCACTTTGCTACAAGAGAGCAAATTTTTGGCCTCAT
GTGGCTATGAAAGTAACTCAAAATGGGGTGAAAAGGTTGGTTTTATGTAT
CATTCTCTTGTTGAAGATTACTTCACGNGATTTAAACAACTACACTGCAA
AGGATGGAGATCGGTGTATCTTAACCCGGAAAGGCCGCAATTTTTGGGCA
CTTCTACAACAAACTTAAATGACTCGTTGGTTCAAGGCACGAGATGGAGT
TCGGGATTGGTTCAAGTAGCAATCTCAAAGTATTGCCCTCTGATATATGG
ACCACCGAGGATGTCTTTGCTTGAAAGCATGGCCTATGCTGACCTTGGAA
TGTTCCCTCTTCTTAATTGCTTGCCTCTGTGGTGCTTTGCCACTGTCCCT
CATCTCTGCGTATTGCATGGCATCCCATTGTACCCTGAGGTTTTAAGTTC
ATCTTCCCCCATATTCGTATTCGTTTTCCTATCGGCGCTTTCTAAACATC
TATACGAGGTTCTTTCAACTGGTGGATCAATCAAGATATGGAGAAATGAA
CAGAGAATATGGATGATAAGGGCAGTCACATGCCAACTTTATGGAAGCTT
AAATGCCATTATGCACAAGCTTGGCTTAGCTGAAGCCAGTTTCTCGGCCA
CAAATAAAGTCGCGGATGATGAACAAGTGAAGCTCTACGGAATGGGCAAG
TTCGATTTCCGAACATCAAA
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