CK938954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23 Identity = 64/232 (27.59%), Postives = 125/232 (53.88%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNC-LPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKV----ADDEQVKLYGM 694 ++++ E+ + SC YE ++WG +VG++Y S+ ED T ++ +H +GW+SVY R F GT+ NL D L Q RW++G V++ S+ L + +M +L+ +AY ++G++P + L ++CF +P L + G + + + + + ++ + E+ +G +++ W ++ W+I + L L ++ + E SF+ T+K DDE +LY + Sbjct: 794 ASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYR-MHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL-FASSKMKVLQRIAYLNVGIYPFTSVFLIVYCF--LPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAV 1021
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23 Identity = 64/232 (27.59%), Postives = 125/232 (53.88%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNC-LPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKV----ADDEQVKLYGM 694 ++++ E+ + SC YE ++WG +VG++Y S+ ED T ++ +H +GW+SVY R F GT+ NL D L Q RW++G V++ S+ L + +M +L+ +AY ++G++P + L ++CF +P L + G + + + + + ++ + E+ +G +++ W ++ W+I + L L ++ + E SF+ T+K DDE +LY + Sbjct: 794 ASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYR-MHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL-FASSKMKVLQRIAYLNVGIYPFTSVFLIVYCF--LPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAV 1021
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23 Identity = 65/230 (28.26%), Postives = 123/230 (53.48%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNC-LPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVA----DDEQVKLY 688 ++ + E+ + SC YE ++WG ++G++Y S+ ED T ++ +H +GW+SVY +R F GT+ NL D L Q RW++G V++ S+ L+ +M +L+ +AY ++G++P + L ++CF +P L + G + + + + + ++ L E+ +G S++ W ++ W+I + L L ++ + E SF+ T+K DDE LY Sbjct: 814 ASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYR-MHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL-ASSKMKILQRIAYLNVGIYPFTSIFLIVYCF--LPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGVEISFTLTSKSGGDDIDDEFADLY 1039
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23 Identity = 60/205 (29.27%), Postives = 109/205 (53.17%), Query Frame = 2 Query: 47 SCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVY-LNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658 SC YE ++WG ++G++Y S+ ED T ++ +H +GWRSVY + P R F GT+ NL D L Q RW++G V++ S+ L + PRM LL+ +AY + GM+P + L + +P + + G + + ++ + + L+ L E+ +G ++ W ++ W+I + L ++ + + SF+ T+K Sbjct: 882 SCFYEEKTEWGRRIGWIYGSVTEDVVTGYR-MHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL-FASPRMKLLQRVAYFNAGMYPFTSVF-LLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSK 1083
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.303e-22 Identity = 59/217 (27.19%), Postives = 113/217 (52.07%), Query Frame = 2 Query: 23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI-YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKH----LYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658 ++ ++ + C YE + WG +G++Y S+ ED T +H +GW S Y++P+ P FLG+ + ++L+Q RW++G +++ +K PL ++ + +AY L + L +P + +P C+LH L+P+ L ++ + ++ + H L+E +S G S++ W Q +W I A + L+ + + LG++E F T K Sbjct: 431 IEAAREVGHCQYEYQTSWGNTIGWLYDSVAEDLNTSIG-IHSRGWTSSYISPDTPAFLGSMPAGVPEALLQQRRWATGWIEILFNKQSPLRGLFSKKIRFRQRLAY--LCIITCLRSIPELIYCLLPAYCLLHNSTLFPKGL------YLGITVTLVGIHCLYTLWEFMSLGYSVQSWLVSQSVWRIVATSSWLFSIFDITLKLLGISETVFIITKK 638
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22 Identity = 68/231 (29.44%), Postives = 120/231 (51.95%), Query Frame = 2 Query: 29 ESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYP-EVLSSSSPIFVFVFLSALS-----KHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVA-----DDEQVKLY 688 E+ + SC YE ++WG++VG++Y S+ ED T ++ +H +GWRS+Y +R F GT+ NL D L Q RW++G V++ S+ I+ RM L+ +AY ++GM+P + F V C+L I L+ + + S I ++L +++ L E+ +G ++ W ++ W+I + L ++ + + SF+ T+K + DDE LY Sbjct: 855 EAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYR-MHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN-NAIFATRRMKFLQRVAYFNVGMYPFTS-----LFLIV--YCILPAISLFSGQFIVQSLDITFLIYLLSITLTLCMLSLLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSSAPEDGDDEFADLY 1076
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21 Identity = 59/217 (27.19%), Postives = 113/217 (52.07%), Query Frame = 2 Query: 23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI-YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKH----LYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658 L+ ++ + C +E + WG+ +G++Y S ED T +H +GW S Y++P+ P FLG ++++Q RW++GL++V +K PLI ++ +S+AY + + L +P + +P C+LH L+P+ +++ + ++ + H L+E +S G S++ W Q W I+ L+ + I+ LG+++ F T K Sbjct: 430 LEAAQEVGHCHFEYQTSWGKTIGWLYESTAEDANTSIG-IHSRGWTSSYISPKPPAFLGAMPPGGPEAMLQQRRWATGLLEVLFNKQSPLIGMFCRKIRFRQSLAYLYIFTWG-LRSIPELIYCLLPAYCLLHNAALFPK------GVYLGIVVTLVGMHCLYSLWEFMSLGFSVQSWFASQSFWRIKTTCSWLFSIPDIILKLLGISKTVFIVTKK 638
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 62/216 (28.70%), Postives = 109/216 (50.46%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGP-PRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658 S+ ++ +K ++SC YES + WG +VG+ Y S+ ED T +++H GWRS L E P FLG + T L Q RW++GL ++ IS+ PL+ + + +AY L ++ + + L C+ + C+L + + I + +FL+ + + E + G S++ W N R+ I + + L ++ +GL+E F T K Sbjct: 467 SSHIEVAKEVSSCNYESGTHWGLEVGWAYGSMTEDILTG-QRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWATGLFEILISQNNPLLLSIFKHLQFRQCLAYLTLYVWAVRGFVEL-CYELLVPYCLLTNQSFLSKASENCFNITLALFLTYNTYNFVEYMECGLSVRAWWNNHRMQRIISASAWLLAFFTVLLKTIGLSETVFEVTRK 680
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 65/237 (27.43%), Postives = 118/237 (49.79%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGP-PRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK----VADDEQVKLYGMGKFDF 709 S+ ++ +K +++C Y+ + WG++VG++Y SL ED T +++H GWRSV + E P F+G++ L Q RW++G ++ IS+ P++ R+ + +AY + +PL L C+ + C+L P+ + + +F+S + + E ++ G S + W N R+ I +V+ L ++ LGL+E F T K DD+ G+F F Sbjct: 436 SSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTG-QRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFEL-CYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTF 670
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 65/237 (27.43%), Postives = 118/237 (49.79%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGP-PRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK----VADDEQVKLYGMGKFDF 709 S+ ++ +K +++C Y+ + WG++VG++Y SL ED T +++H GWRSV + E P F+G++ L Q RW++G ++ IS+ P++ R+ + +AY + +PL L C+ + C+L P+ + + +F+S + + E ++ G S + W N R+ I +V+ L ++ LGL+E F T K DD+ G+F F Sbjct: 436 SSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTG-QRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFEL-CYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTF 670 The following BLAST results are available for this feature:
BLAST of CK938954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938954 ID=CK938954; Name=CK938954; organism=Citrus sinensis; type=EST; length=720bpback to top |